Drepanopeziza brunnea: MBM_00727
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Entry
MBM_00727 CDS
T03105
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MBM_00727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mbe03041
]
MBM_00727
Enzymes [BR:
mbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MBM_00727
Spliceosome [BR:
mbe03041
]
Complex C
Other components
Step II factors
MBM_00727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_30
AAA_19
T2SSE
SLFN-g3_helicase
nSTAND3
TsaE
SRP54
Motif
Other DBs
NCBI-GeneID:
18756662
NCBI-ProteinID:
XP_007288616
UniProt:
K1Y901
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MDDLESLEILSLVSKVTSELQNHLGISDKTLAEFIISQHAPSLKLEEFRTKLEAMGAEFP
QSLIESVDRLVRTMHPKYKSLKNGGEQMGNGSRKLEERTNVFKGLAMPDIQAPWQDEAEG
APVNESTKLETDAIDDTMALLEGLGSKARTEKPAQSSRKRSRSPEEDVERGRSRKERYRS
RSRSRSVEERRRRKTGAVDQDDYGRSRNGHKSSRRKRDEEDRFRRPPTPEIDDAPILYKV
YDGHVTGVKDFGAFVNIHGVNGRVDGLVHVSALAEGQRVNHPSDLLSRGQPVKIKVIKIE
GSRIGLSMKDVDQETGRDLAPQARIQSGANMEKIGGKGEYGLIDEKALVFEGDMPSSSRR
TKKRMTSPERWEIRQLIASGVVKASDYPDLDEDYNAALNGEGEMELEEDVDIELREEEPP
FLAGQTKQSLELSPIRVVKAPDGSMNRAAMAGTTLAKDRRELRSQEAQDKAAEEGSKVDL
SAQWQDPMANPDSKKFASDLRSIKPAPANEAVPEWKMATQNKDQSFGRRTDMSIKQQRES
LPVYRFRSELIKAVHANQLLIVVGDTGSGKTTQLTQYLAEAGFANNGLIGCTQPRRVAAM
SVAKRVAEEVGCELGQEVGYTIRFEDCTSPSTKIKYMTDGMLQREILMDPDIKRYSVIML
DEAHERTISTDVLFALLKKTLKRRPDLKVIVTSATLDADKFSAYFNECPIFSIPGRTFPV
EVMYSREPESDYLDAALVTVMQIHLTEPPGDILLFLTGQEEIDTSCEILFERMKALGPSV
PELIILPVYSALPSEMQSKIFDPAPPGSRKVVIATNIAETSITIDHIYYVIDPGFVKQNA
YDPKLGMDSLVITPISQAQAKQRAGRAGRTGPGKCFRLYTESAFQSEMLPTSIPEIQRQN
LSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFP
MEPSLAKVLIASIDLGCSDEILSIVAMLSIPSVFYRPKEKQTQADQKKAKFHDPHGDHLT
LLNVFNGWKQNKFANPWCFENFIQARSMRRAKDVRDQLVKIMERYKHAIVSCGRNTQKVR
QAICSGYFRNSARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHTLIMTSKEYMHC
TTTIEPKWLVEAAPSFFKVAPTDKLSKRKKAERIQPLYNKFAAEDDWRLSSQKRQGRGGG
GGTWG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctcgagtctctcgaaattctctccctggtgtccaaggtaacatcagaactt
cagaaccatctggggatcagcgacaaaaccctggcagaatttatcatctcgcagcatgcg
ccgtctctcaagctcgaggagttccggacgaagctggaggccatgggggcggaattccca
cagagtctaatcgagagcgtggatcgcctggtgcggaccatgcacccaaaatataagagt
ctgaagaacgggggagagcagatgggcaatgggtcgcgcaagctggaggagaggaccaat
gtctttaaagggcttgcgatgcccgacatacaggcaccttggcaagatgaggcagaagga
gctccggtgaacgaaagtacgaagctagagactgatgcgatcgacgacaccatggctctc
ttggaaggcttggggagcaaggcgaggaccgaaaagccagcccagtctagccggaagcgc
agtcgaagccccgaggaggatgtggagagagggaggagcaggaaggagagatatcgatct
cggtctcggtctcgatcggtagaggagaggaggcgcaggaagactggtgctgttgatcaa
gacgactatggtcgctcgagaaacggtcataagagcagtcggcggaagagggacgaggag
gacaggttcagacggccaccaacacccgaaattgacgacgcacccatactatacaaggtc
tacgacggtcacgtcacgggtgtcaaagactttggggcttttgttaatatccacggagta
aatggcagagttgatgggcttgttcatgtgtccgcgttggccgaaggtcagcgggtgaac
cacccgtccgatcttctttccagaggccagcctgtcaagatcaaggtaatcaagatagag
ggctcaagaatcgggctttccatgaaggatgtcgaccaagaaactggaagggatctcgcc
ccccaagctaggatacaatctggcgccaacatggagaagatcgggggaaagggcgagtat
ggacttatagatgagaaagcactggtctttgagggcgacatgccgagcagttcccgaaga
acgaagaagcgaatgacatctccagagcgctgggaaatccgtcagctcatcgcatctggt
gtcgtgaaggcatcggattacccagatctcgacgaagattacaatgctgcattgaatggc
gaaggagagatggagctagaagaggacgtcgatatcgagttgcgagaagaggagccgcca
tttcttgctggtcagaccaaacagtcactggaactatctcctatcagagtggtcaaagca
ccagatggttctatgaatcgtgccgctatggctggaactacattggcgaaagatagaaga
gaattgaggtcacaagaagctcaggacaaggcagctgaagaagggtcgaaggttgatctg
tcggcacagtggcaagatcccatggccaatccagactcgaagaaattcgcgagtgatctt
cggagcatcaagcccgccccagcaaacgaggctgtacccgaatggaaaatggctacacaa
aacaaagatcagtcatttggacgacggacagacatgtccataaaacaacaacgggagtct
ctgcctgtatacaggttccgatccgagcttatcaaagctgttcacgcgaaccagcttctg
attgtagtcggcgacacaggatccgggaaaacaactcaattgacacagtacttggcagag
gcaggctttgctaacaacgggttgatcggatgcacacaaccccgccgtgttgctgcaatg
tcggttgcgaaacgtgtggccgaggaggttggttgcgaactcggtcaagaggtcggatac
acgattcgattcgaggattgcaccagcccgtcaaccaagatcaagtacatgaccgatggt
atgttacagagagagattcttatggaccctgatatcaagagatactcggtcatcatgtta
gatgaagcccacgaacgtactatctccacggatgtgctgtttgcgctgctcaaaaagacc
ttgaagaggaggcccgatttaaaggtcatcgtcacttctgcgactttggacgctgataag
ttctcggcatacttcaacgagtgtcccatcttctcgattcccggacgtacctttcctgtc
gaagtcatgtattctcgggaaccagagtccgattatctagacgcagctctcgtcacagtt
atgcagattcatctgaccgaacctcctggagatatacttctcttcctgactggccaggaa
gagattgataccagttgcgagatcttgttcgagcgtatgaaagctctgggaccgagcgtg
cctgagctgatcattctccctgtgtactctgctctacccagcgagatgcagagcaagatt
tttgacccagccccacctggaagtagaaaggttgttattgcgacgaacattgcggaaaca
tctatcaccatcgatcacatttactatgtcatcgatcccggcttcgtcaagcaaaatgcc
tacgacccaaagctcggaatggattctctcgtaatcacgccaatttcccaagcccaagcc
aaacaacgtgctggtcgcgcgggaagaacagggcctggaaaatgtttccgcctctatacc
gaatccgccttccagtctgaaatgctaccaacatcgattcctgaaatccagcgacaaaat
ctttcacatactattttgatgctcaaggcaatgggaatcaacgaccttttgcactttgac
ttcatggacccgccgcccacgaataccatgttgactgcgctcgaagagctatatgcattg
tctgctctggacgacgaaggactgttgactcgattaggtcgaaaaatggccgattttccg
atggagccgtcgctggccaaggttctcatcgcctcgatcgaccttggatgctcggatgaa
atcctcagtatcgttgcaatgctgtcgattccatccgtcttctaccgaccgaaggagaag
cagacacaggctgaccagaagaaggccaaattccatgacccccacggtgatcatctcacc
ctgctcaatgtgttcaatgggtggaagcaaaacaagttcgccaacccatggtgtttcgag
aacttcatccaggcgcgctctatgcgccgggcgaaggatgtccgggaccaactcgtcaag
attatggaacgctacaagcacgccatcgtctcttgcggccgcaacacccagaaggtgaga
caagccatctgcagtgggtacttccgcaactcggcccggaaagatcctcaggagggctac
aagaccctcattgagggcacgcctgtctatctgcatcccagctcggccctatttggaaag
caggccgaatgggtcatctaccatacacttatcatgacgagcaaggagtacatgcactgc
acgacaaccatcgaacccaaatggctcgttgaggcggcgccatcgttcttcaaagttgcg
ccgacggataaactgagtaagcgaaagaaggctgagaggatccagcctctgtacaacaaa
tttgcggcggaggatgattggagactgtcgtcgcagaagcggcaaggccgaggcggtggt
ggtggaacgtggggatga
DBGET
integrated database retrieval system
