Drepanopeziza brunnea: MBM_03057
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Entry
MBM_03057 CDS
T03105
Name
(RefSeq) RNA-metabolising metallo-beta-lactamase
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MBM_03057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbe03019
]
MBM_03057
Messenger RNA biogenesis [BR:
mbe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MBM_03057
U7-dependent histone pre-mRNA processing factors
MBM_03057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
18758992
NCBI-ProteinID:
XP_007290946
UniProt:
K1WM91
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MFTFCSLLGAQSESSASQSILELDGGVKVLIDVGWDETFDVAKLKELEKQVPTLSIILLT
HATVSHIAAFAHCCKHFPLFSRIPVYATLPVISLGRTLVQNIYASTPLSATIIPHSALSE
ASYAYSQTISANQDANILLQPPTSEEIASYFALIHPLKYSQPHQPLPSPFSPPLNGLAIT
AYNAGHTLGGTIWHIQHGLESIVYAVDWNQARENVLAGAAWLGGAGAGGAEVIEQLRKPT
ALICSSRGGERHALPGGRAKRDELLLEMIKTSVSQGGIVLIPTDSSARVLELAYLLEHVW
RTESKDEDSHLRGAKLYLASRNIGATMRYARSMLEWMDDAIIREFEANAGINQKETGSKA
AGDAKGSSDGGPFDFKHLRLLERKGQIDRIMGQTDIDRHGRSIGKVILASDASLEWGFSR
DILKAVADDTRNLIILTEKMAKPQGEATSSLAKTLWSWWEDRESVVSEETKSGLVLDRVN
SGAKSVAIREAKRLALEGNDLSVYQQWLATQRQLQTTLQSGGATSLENSADVVDDASSDS
SSDSEDSETEQQGKSLNISAIGQASRKKIGMSDEDLGINVLLRKKDVYDYDVRGKKGREK
MFPLAVRRKRVDDFGELIRPEDFLRAEERDEVNGQDMRNQPNKHDTRDTLGKKRKWEEHS
SNGHLIVNEFNKRKQKNRNQRDSPEAGEISPGPEDQQSEDDEDSGDLLAESSPAKVVFTS
ENLTLNVRIAFVDFAGLHDKRSLQMLLPLIQPRKLILVGGMKDETLALAGDCRKLLKSES
TIDVYTPEIGTIVDASVDTNAWAVRLTSALVKQLTWQKVKDLRIATVTARLETIADALNP
DDESSNKKQKLLREGDEEESDDTKKDLVSASSAETELPTLDVLPSNMASATRSVAQPLQV
GDLRLPDLRKLMLAASHTAEFKGEGTLLIDSTVIVRKTGTGRIEVESIGLATGYGSSFYA
VKSMIYQGLAVVNSKPHKLASPEPQVQEHTYTRSLPAGISRIVFKHALLQDPLSSVQLVR
FLSIAVYSSFGERIFYIYQVQSLSAGRQGYSTSHGIDPGPPPPASPPSQPSQSRGQLSTP
LQALQLQPSNPVRSYPQVALMAGRGHNPAHGYDIGPLPPNFYGTAYPGMPQPRPMAYLPP
PSQFPPFQQQILSAWPGPQAYPPYSATYAAPPPISDGGFPGINLRNHFGPNSPTGGVGLP
PGYNYIFPSEHTIIHILSVATKPWQLGSSLLPGPHSPLPHTKFYVPVSMNLKEFLGKIGC
TEGNGRTDTVFEVSEKGNGGWAKGLTVSMANKDLMKKSVGDLGWRSNRNGNLHKNGQPVV
WLWKAEDAPPQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgttctgctcactgctgggcgcgcaatccgagtcgtcggcctcacagtcaata
ctggagctcgatggaggggtcaaagtcctcatagacgtgggctgggacgagacattcgat
gtggctaagctgaaggagcttgagaagcaagttccaactctctcgattatccttcttaca
cacgcgacggtttcccacattgcggctttcgcccattgctgcaagcactttcccttgttc
agccgaataccggtgtatgcgactctccctgttatatccctaggccgaactcttgtacaa
aatatctacgcctcaacccctctatccgcgacaatcatccctcattctgctctctctgag
gcatcatatgcctattcacaaacaatatcagccaatcaagatgccaacatccttctccaa
ccacccaccagcgaagagatagcatcatatttcgctctcatccacccgttgaaatactct
caaccccatcagccgttaccgtcgcccttttctccgcctctcaacggtcttgcaataaca
gcctacaacgcggggcataccctaggagggacgatatggcatattcagcatggcttggaa
tccatcgtttacgcagtcgactggaaccaagctcgagaaaacgtcctggctggtgctgcc
tggttgggaggagctggggccggaggtgcggaagttattgagcaattgcgcaagcccaca
gctttgatatgcagtagccgcggaggggagagacacgctctgcctggtgggagagcaaag
cgggatgagcttcttttggaaatgatcaagacgtcggtcagccaaggaggaatagttctc
ataccgactgattccagtgctcgagtcttggaactagcgtatctcttggagcatgtctgg
cggacggagtctaaggatgaggatagccacctgcgaggggcaaaactttaccttgcgagc
aggaatatcggagcgacaatgcgatatgccagaagtatgttggaatggatggacgatgcg
atcattcgagagttcgaggccaatgctggaataaaccaaaaggaaaccggttctaaagct
gcaggggatgcgaagggtagttctgacgggggtcccttcgattttaaacacttgcggcta
ctggagcgcaaggggcagattgaccggatcatgggtcagacggatatagaccgtcatgga
aggtcgataggtaaagttatacttgcaagcgatgcctctcttgagtggggcttttcacgg
gatatcttgaaggctgtcgcggatgacactcgaaacctgattattctcaccgaaaagatg
gcaaagccgcagggcgaggcaacctcaagtctagcaaagacgctatggtcttggtgggaa
gatagagagagcgttgtttcagaagaaaccaagtccgggctcgttctggatcgagttaac
agtggagcgaagtctgttgccattagagaagccaagcgtttggcattagaaggaaatgat
ttgagcgtataccagcaatggctagctacccaacgtcaacttcaaacaactttgcagtcg
ggaggagctacatcactcgagaactcagctgatgtcgttgatgatgcctcctcggactcg
tcgtcggactctgaagactctgaaacagaacagcaaggaaagtctttgaatatatcggca
atcggtcaggcgagtcggaaaaagattggaatgagtgatgaagacctcgggatcaatgtc
ctgcttcggaagaaggacgtgtatgattatgacgtgcgggggaagaaaggtcgcgagaag
atgtttcccttagccgtccggcggaaaagggtagacgactttggagagttgattcggccg
gaagattttttgagagcagaggagagagacgaggttaatggccaagatatgcgcaatcag
cctaacaaacatgatacccgcgacactttagggaagaagcggaaatgggaagaacattca
tcgaacggccatctcatcgtaaatgagttcaacaagagaaaacagaagaatcgcaaccag
cgcgactcccctgaagctggagaaatatcgcctggtcccgaggaccagcaatcagaggac
gacgaggatagcggcgacctgttagccgaatcttcgcctgccaaagtggtcttcaccagt
gagaatctgaccctcaacgtcagaatagcgttcgtggattttgccggtctgcacgataag
cgaagcttgcagatgctgctaccccttatccaacctcggaagctaattttggtgggtgga
atgaaggacgaaactcttgctcttgcaggtgactgccggaaattgcttaagtcagagtct
acaatcgatgtttacactccagagattggaaccattgtcgatgccagcgtggataccaac
gcttgggctgtcagactgacaagcgcgctagtcaaacagttgacttggcaaaaggtcaag
gatctgaggattgcgactgtcactgctcgcctggagactattgccgacgctctcaatccg
gatgatgaaagtagtaataaaaagcagaagctactgagggagggtgacgaggaagaatca
gacgatacaaagaaggatcttgtttctgcatcttctgcagaaacagagctccccacgctg
gatgtcctcccttcaaatatggcttcagcaacaagatcagtagcacagcctctccaggtc
ggtgatctgcgtcttccagacctgcgaaaacttatgctggctgcaagtcatacggctgag
ttcaagggagagggtaccttgttgatcgattcaacagtcatcgtgcgcaaaactggcacg
ggaaggatcgaagtggaaagcatcgggctagctactggatatggaagctctttctacgct
gtcaagagcatgatctatcagggtttggctgtggtcaattcaaagccacacaagctggct
tcccctgagccccaggtccaagagcacacctacacccgctcgctgcctgctggtatatcc
aggattgtcttcaaacacgccctcctccaagaccccctcagctctgtccaactcgtccgc
ttcctctccatcgctgtgtactctagcttcggtgagcgcatcttctacatttaccaagtc
cagtcgctatctgctggacgtcaaggatacagcaccagtcacggtatcgatccaggacca
ccacctcctgcttcccctcccagtcaaccctctcaatcacgagggcaactctcgacaccg
ctccaagctcttcagctccaaccatctaatcccgtacgttcctacccccaagtcgcccta
atggcaggacgcggtcacaatcccgcccacggttacgatatcgggcctctccctcccaac
ttctatggtacagcctaccccggcatgccacaaccccgtcccatggcctacctcccccct
ccctcacaatttccacccttccaacagcaaatcctcagcgcctggcccggcccccaagca
taccctccttacagtgccacctacgcagcgccaccccccatcagcgacggcggcttcccc
ggtatcaacctgcgcaaccacttcgggcccaacagccccaccggcggcgtcggccttccc
ccaggctacaactacatcttcccctcggagcacaccatcatccacatcctgtccgtggcc
accaagccgtggcagctcggcagctcgctgctcccgggcccgcacagcccgctgccgcac
accaagttctacgtgcccgtctcgatgaacctgaaggagttcctcggcaagatcggctgc
accgagggcaacggccgcaccgacaccgtcttcgaggtctccgagaagggcaacggcggc
tgggccaagggcctgaccgtctccatggcgaacaaggacctgatgaaaaagagcgtgggc
gatctcggctggcggagcaaccggaatgggaacctgcataagaacgggcagcctgtggtc
tggttgtggaaggcagaggatgcgccgccgcagtga
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