Drepanopeziza brunnea: MBM_03304
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Entry
MBM_03304 CDS
T03105
Name
(RefSeq) Rad4 family protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
mbe
Drepanopeziza brunnea
Pathway
mbe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MBM_03304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbe03400
]
MBM_03304
DNA repair and recombination proteins [BR:
mbe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
MBM_03304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_2
BHD_1
Transglut_core
DUF3246
Motif
Other DBs
NCBI-GeneID:
18759239
NCBI-ProteinID:
XP_007291193
UniProt:
K1WZ95
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MPPFLPRKRLRSESLEAGPSNPAPARGKAKSKTTTPRKPTLFDDLDAGTGSKRSATHKKA
ILEKLAAGDEDDESSLSSLSEPEFEDVPVAKRQRPNEEEGDDDDDDEDDEEDMEFEDVET
NPIPRSAGPEPSGDLELVLHKDDRVSITNPLGSKKGPSKIERGIRVATHQMHVQALMFHN
ALRNAWCCDKELQEILVKQLSPREAQAVEKWRRDSGLASREDVQSTGGKGKGKAKAAKGK
KADPRSQRDWGEPAGRLAEGTVNMSAGDPLFTLMKHLMKYWRTRFSIQAPGLRKLGYMSL
QRLDEETKSFKEDEHDPERHGERIRNLKEFRKCAEAMEGSRDVSSQLFTGLLRGLGIEAR
LVASLQPLGFGWSQVEEAMEKNPRVLKVKKTKKPVDIADHDPEDDTSSSGEDESCRPANK
GKGPAKPTKLQKPTPRPGKPSRDSGVKEAPIDLSDSEDLDVDSDGVEDVTPRRRPAKRPD
LAYDTDLPHPHYWTEVLSPVTNTYTPVDPVVLHVCAYNQQLVEKFETRGAKSEKAKQVTA
YIIGHSPDGTAKDVTTRYLKRHVWPGRTKGFRLPVEKVPVYNRHGKVKRYEQKDWFKQVM
SGYVRGSKKCPRTEVDDDEEAADLKPVKAERKEVEEGKETLQYYKSSPDFVLERHLKREE
ALLPEAQHVKMFTVKGKGEASTEEKVFRRKDVVNCKTIETWHKEGRAPKEGEQPLKRVPY
RAATTNRRRELAEAEHASGEKVLQGLYSREQTDWIIPPPIENGVIPKNAFGNIDLYVDSM
LPAGAVHIPLRATVKICKRLEIDYAEAVVGFEFGHRMAVPIISGVVVAEEHHDTIMEEWH
KEEAERVRKEDEKSRKMVLHTWRKMLMGLRIVERVRGEFGDADEEADVLNPWTREKKQTA
DDREAEAQEQIMDRDDEDMAGGFLPEGFDAEETEPPQRESFFPVTREDEDEESGGGFVVE
NYEQRPKAGQAYATPQSLEISSKGGAASGDDAGTGDEKATTPAPKKRGRPAAGSSSSKTA
TKPIAKRPLALQKPAGKGKQKQKQQMHDLENYETDDLSSPPPLDEGESEEEEEPPQKKRR
HAISRAKATDAAPRRTPRRQAARKSETALKSHYFEHDDEDEDE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgttcctcccccgcaaacgtctgcgatcagaatcactagaagccggaccctca
aatcccgcgccggcgaggggcaaggccaagtccaaaaccaccactccccgaaaacccacc
ctcttcgacgacctagacgcgggaactggttcaaagagaagtgccacgcacaagaaagca
atcctcgagaaactggcagccggtgacgaagacgacgaaagctctctttcctcgctctcg
gagccagaattcgaagatgtgcctgttgcgaaacggcagaggcccaacgaggaggagggc
gacgacgacgacgacgacgaagatgacgaggaggatatggaattcgaggatgtggaaaca
aatcccatacccagatccgccggccccgaaccctcgggcgatctcgaattggtgctgcac
aaggacgaccgggtttcgatcacgaatccgctgggctccaagaagggaccgagtaagatc
gagagggggattcgagttgcgacgcaccagatgcatgtgcaagcgctgatgttccacaat
gccctacgcaatgcgtggtgttgcgacaaggagctgcaggagattctggtgaagcagctg
tcgcctcgtgaagcgcaggctgtggagaagtggaggcgtgatagtgggcttgcctcgagg
gaggatgtgcagtcgacaggagggaaggggaaggggaaagctaaggctgcgaagggcaag
aaggctgatccgagaagtcagagggattggggtgaacctgctgggagactggctgaaggg
acggtcaacatgagtgcgggcgatccactcttcacgctgatgaaacatttgatgaagtat
tggagaactcgattcagtatccaggcacctggtttgagaaagctgggatacatgtcgctt
cagagattagacgaggagaccaagagcttcaaggaagatgagcacgatccggagcgacac
ggcgaacggatacgaaacctcaaggaattccggaagtgtgcagaagcgatggagggtagt
cgcgatgttagctctcagctatttactggtttattgagaggtctgggaatcgaagctcgc
ctagtggcaagtctgcagccactgggatttggatggagtcaggtggaggaggcgatggag
aagaatcctcgagttttgaaggtcaagaaaaccaagaaacccgtcgatattgccgatcac
gatcccgaagatgacactagctccagcggagaagatgaatcttgcagacctgcaaacaaa
ggaaagggtccagccaagccgacgaagctacaaaagcctaccccaaggcctggcaagcca
tcccgagatagtggcgtcaaagaggcgccaatagatctttcggactctgaagatctggac
gtggacagtgatggagtggaagatgtcacgccaagacgcaggccggcgaaacgaccagat
ctggcatatgatacggacttgccgcatcctcattattggacggaagttttatcaccagtg
accaacacgtacacacctgttgatccggtcgtcctccacgtatgcgcttacaaccaacaa
ctcgtcgagaaattcgagacccgcggtgcgaaatcagagaaagcgaagcaggtcacagct
tacatcatcgggcattctccggacggaacggcaaaggatgtcactactcggtatctcaag
cgtcatgtctggccgggcagaacgaaaggattccggttgcctgtcgaaaaggtccccgta
tacaaccgacatggcaaagtcaaacgttacgagcagaaggattggttcaagcaagtcatg
agtggctacgtccgaggatcaaagaagtgtccacgaaccgaagtcgacgatgatgaagaa
gcggctgatctcaaacctgtgaaggcggaaaggaaagaggtcgaagaaggtaaagagacg
ttacagtactacaaatcttcgccagatttcgtccttgaacgacatttaaagagggaagaa
gccctgctccctgaagcacagcacgtcaagatgtttactgtgaagggcaaaggggaagcg
agcacggaagaaaaagtctttcggcggaaagatgtggtcaattgtaagacgatagagacc
tggcataaggagggtcgggccccgaaagagggggaacagcctttgaagcgggtcccgtat
cgagctgcgactacgaatcggagacgtgagctcgctgaagcagaacatgcaagtggagag
aaggtattgcagggcctgtattctcgggagcaaacggactggatcattccgccccctatc
gagaatggagtcatccccaaaaacgctttcggtaatattgatttatatgttgatagcatg
cttccagcaggagcagtacacatcccactgcgggctactgtcaagatctgtaagaggctt
gaaattgactatgcggaagctgtcgttggttttgaatttggccacagaatggcagtgccg
atcatctcgggtgtcgtagtcgctgaggagcaccacgatacgatcatggaagagtggcac
aaagaagaggctgagcgtgtaaggaaagaggacgagaagtcacggaagatggtcttgcat
acatggaggaagatgttgatgggactgcggattgtggagagagtccgaggggagtttgga
gatgctgatgaggaagccgatgttttgaatccgtggacgagagagaagaagcagactgcc
gatgatcgcgaagcggaagcccaggagcagattatggatcgggatgatgaggatatggcc
ggtgggtttttgccggagggttttgatgctgaggagacagagccgccgcaaagagaaagc
ttctttcctgttactcgtgaggacgaggatgaggaatcaggtggtggatttgttgtcgag
aactatgagcaaagaccaaaggctggccaggcatatgccacgccgcagtcactcgagatc
agttcgaaaggaggcgccgcctcaggagacgatgctggtacgggagatgagaaggcgact
actccagcaccgaagaagcggggacggccagcagctggatccagcagcagcaaaacggca
acaaagccgatcgccaagcgcccccttgcgttgcaaaagcctgccggcaaggggaagcag
aagcagaagcagcagatgcacgacttggagaattacgagaccgacgatctctcctcgccg
ccccctctggacgagggggaatcggaagaagaagaagagccgccccagaagaaacgcagg
catgcaatctcgcgggccaaggctaccgatgctgcccctcgcaggaccccgaggaggcag
gctgcgcggaagagcgagacggcattaaaatcgcactattttgaacatgacgatgaagat
gaagatgagtga
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