Moschus berezovskii (Chinese forest musk deer): 129538376
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Entry
129538376 CDS
T09065
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mbez
Moschus berezovskii (Chinese forest musk deer)
Pathway
mbez04151
PI3K-Akt signaling pathway
mbez04510
Focal adhesion
mbez04512
ECM-receptor interaction
mbez04820
Cytoskeleton in muscle cells
mbez04926
Relaxin signaling pathway
mbez04933
AGE-RAGE signaling pathway in diabetic complications
mbez04974
Protein digestion and absorption
mbez05146
Amoebiasis
mbez05165
Human papillomavirus infection
mbez05200
Pathways in cancer
mbez05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mbez00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129538376 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129538376 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129538376 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129538376 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129538376 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
129538376 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129538376 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
129538376 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129538376 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
129538376 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129538376 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mbez04147
]
129538376 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mbez00536
]
129538376 (COL4A3)
Exosome [BR:
mbez04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129538376 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mbez00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129538376 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129538376
NCBI-ProteinID:
XP_055254513
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MRQRTAPRPPALLLPLLLVLLAAAPTEGKGCICKDKGQCFCDGAKGEKGEKGFPGPPGPL
GQKGYPGPEGLPGPQGPKGSPGSPGLTGAKGVRGITGLPGFSGPPGLPGIPGHPGPYGLA
GLPGCNGSKGEPGFPGLRGTPGYPGMPGVIGLKGEKGAPAEGEGVGLDGKGDPGLPGAPG
FQGLPGLPGFPGPAGPLGPPGFLGFPGSMGPPGPKGHMGDNVLGQKGERGVKGLTGPPGP
PGTVIVTLTGPDNRTDLKGEKGDQGAMGQSGPPGPSGPPGESYGSEKGAPGEPGPQGKPG
KDGAPGFPGTEGVKGDKGFPGLRGEDGIKGWKGNSGPPGFRGPTEYYDAYQEKGDEGIPG
LPGPKGARGPQGPSGPPGAPGSPGSSRPGLRGAPGVPGVKGSKGEQGPPGKTAVGPPGSP
GYPGSPGPMGFPGPPGPPGSIVFREGPPGVGGLPGHIGSPGIPGVGGPKGEPGLLCTQCP
YIPGSPGPPGLPGLEGEKGFQGEPGAAGVKGSPGSPGSAGLPGFPGFPGVQGQPGLKGEK
GEASQPEGQVGAPGDPGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPALSGEKGDPGLPGD
PGIPGSPGPIGPAGPSDYGPQGEPGPKGAQGLPGAPGPPGEAGPEGETGILTPVPGPPGP
PGPPGRAGPRGPPGIPGSTGECNLGLPGPDGEPGIPGIGFPGPPGPKGDRGFPGAKGSPG
CPGEMGKPGLPGKPGLPGIKGEPGLAMPGEPGAPGLPGERGSSGENGEIGLPGLLGLPGV
PGTGGLDGPRGDPGKPGPPGERGPPGRCTEGPRGAQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGLPGMPGHRGEMGPPGPKGYPGNPGFLGPPGEKGIMGMMGFPGHIG
PPGPPGNPGTPGQRGSFGIPGVKGTRGPPGAKGEQGERGTPGSPQMFHLVGDKGEPGRKG
LAGKPGEKGSRGIPGLPGIKGLTGLPGPPGPPGPRGEPGSIGNPGEPGPRGIPGSMGNMG
VPGTKGMKGTVGFPGLAGSPGLPGIHGLQGDKGEPGYSEGARPGPPGPKGDPGLPGDMGK
KGERGPPGAPGRSGPAGPEGLPGSPGPPGHPGKSGPGGDLGSKGIKGFPGFPGIKGPPGP
PGLPGNPGPVGERGNQGLDGIPGPAGEKGETGLLGAPPGPRGKPGPQGAKGDRGAPGLPG
LPGRKGSVGDAGPPGPIGMTGPQGAPGFPGVTIPGQKGDRGPPGSRGNPGVPGPPGRPGG
PVEGVKGDKGLMGEPGRRGPPGAVGDVGPPGHPGAPGVPGRLGARGDPGFYGFPGMKGEK
GNSGFPGPPGPPGQTGPKGPPGARGEPGTVKIISLPGSPGPPGSAGEPGMPGEPGPPGPP
GDPGPCGPKGKPGEDGPPGSPGPTGEKGNKGSKGEQGPPGSDGLPGLKGKPGDTGPPAAG
TVMRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPAMIPMDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPPCPAGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLDPKRMFRKPIPSTVKAGELENIISRCQVCMKRRP
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagaggaccgcgccaaggccgcccgcgctgctgctgccactgctgctggtgctc
ctggcggcggcgcccacggagggcaagggctgtatctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggcttcccaggaccccctgggcctctc
ggccagaagggatacccaggtcccgaaggcctgcctggaccacagggacccaagggctct
ccaggatctccaggactgactggtgccaaaggcgtgaggggaataactggattaccagga
ttttcaggtcctcctggacttccaggcatcccgggccatcctggaccttatggacttgct
ggtttgccaggatgcaacggttccaagggagagccagggttcccaggacttcgggggaca
ccaggctacccagggatgccgggtgtcattggtttgaaaggagaaaagggcgctcctgct
gaaggagaaggtgtaggccttgatggaaaaggtgaccctgggttgccaggagctcctgga
ttccagggtttgccaggccttccaggttttcctggacctgcgggtccacttggccctcca
ggattccttggctttccgggaagcatgggacctccaggacctaagggtcacatgggtgat
aacgtgctaggacagaaaggagagcggggtgtgaaaggattgacaggaccacctggacca
ccaggaacagttattgtgactctaactggccctgataacagaacggacctcaagggagag
aagggagaccagggagccatgggacagtccggaccccctggaccctccgggccacctgga
gaatcttatggatcagaaaaaggtgctcctggagaaccaggcccgcagggaaagcctgga
aaagatggtgcccccggttttcctggcactgagggagtcaaaggcgacaagggtttccct
gggttaaggggtgaagatggcattaaggggtggaaaggaaactctggccctccaggattt
cgtggtccaacagaatattatgacgcataccaggaaaagggagatgaaggaattccaggc
ctaccagggcccaagggagctcgtggcccgcagggtcccagtggtccccctggagcccct
ggaagtcctgggtcatcaaggcctggcctccgaggagcccctggagtacccggtgtgaaa
ggaagtaaaggggagcaagggcccccaggaaagactgcagtggggcctccggggtccccc
ggctatcctggttctccaggtcctatgggcttcccgggacctccaggcccaccaggtagt
attgtttttcgcgaaggtccacctggagttggtggacttccaggccatatagggtcacca
ggtatcccaggagtcggtggacccaaaggggagccaggcctcttgtgcacacagtgtcct
tatatcccagggtctccaggcccccctggattgccagggttagaaggcgaaaaaggattc
caaggagaaccaggggcagctggcgttaaaggaagcccagggtccccaggaagtgctggt
cttccaggatttccaggattcccaggtgttcagggtcagccaggacttaaaggagaaaaa
ggtgaagcatctcagccagagggacaagtgggtgccccaggggatccaggactccgagga
catcctggaagaaagggcttggatggcattcctggaactccaggagtgaaaggattacca
ggacctaaaggagaaccggccctgagtggtgagaagggggacccaggtcttccaggggat
cctggtatccctgggtccccaggacccataggaccagctggaccatcagactatggacca
cagggagagcctggtccaaagggagcccaaggacttcctggagcccctggaccacctgga
gaagccggtcctgagggagaaactggtattttgacaccagtcccagggcccccaggaccc
cctgggcctcctggccgtgctggtccccggggtccacctggtattcctggatccacggga
gaatgtaatctcggtctcccggggcctgatggtgaaccaggaattccaggaattggattc
cctgggcctcctggacctaagggagaccgagggtttccaggagccaaaggatcaccaggt
tgtcctggagaaatgggaaagccagggttacctggaaagccaggcctcccaggaatcaag
ggagagccaggactagccatgcctggagaacccggagcgccaggtttgccaggagaaaga
ggcagctctggggaaaatggagaaattggactccctggacttctgggtctccctggagtt
ccaggaactggggggcttgatggaccacgaggggatccagggaagcctgggccacctgga
gaaagaggacccccaggaaggtgcacagagggtcccaggggagctcaaggacttccaggc
ttaaatggattgaaagggcaacaaggcagaagaggtgaaacagggccaaagggagaccca
ggtatcccaggcttggataggtcaggatttcctggagaacctggactaccaggaatgcca
ggtcaccgaggggagatgggaccacctggtccaaaaggatatccaggaaatccaggattt
ttagggccaccaggtgaaaaaggaataatggggatgatggggtttccaggccacattggt
cccccagggcctcctgggaacccaggcaccccaggacagagggggagctttggaattcca
ggagtaaagggcacgagaggacccccaggagccaagggagagcagggagagagaggaact
cccgggtctcctcagatgttccacttagtgggggacaaaggggagccaggacgcaaagga
cttgcaggaaagcctggtgagaaaggaagcagaggcattccagggttaccaggtataaaa
ggactcacagggcttcctggaccaccaggaccaccaggtcccagaggagaaccgggcagc
attgggaatcctggtgagccaggaccacgtggcatcccaggaagcatgggaaacatggga
gtgccaggtactaaaggaatgaagggaactgtgggattcccaggtcttgctggaagtcca
ggcctcccagggattcacggtctccaaggagataagggagagccaggttattcagaaggt
gcacggccaggaccaccagggccaaagggagatccaggattgccaggtgacatgggcaag
aaaggcgaaagagggccacctggcgcacctggacgttcggggcctgctggaccagaggga
cttcctgggagtcccggaccccctggccatccagggaaatctggtcctggtggtgatttg
gggtccaaaggaatcaaaggcttccctggctttccaggaataaaaggccctccaggtcct
ccaggattgccaggaaatcctggaccagtgggtgagagaggtaatcaaggacttgatgga
attcctggtccagctggggaaaaaggagaaacaggcttgctgggagcacctccaggtcca
agagggaaacctggtcctcaaggagccaaaggagacaggggagcaccaggcttgcccggc
ctccctggcaggaaagggtcagtgggagatgctgggcctccagggcccattggcatgaca
ggacctcaaggggcaccaggctttcctggtgtaaccatccctggccagaaaggagatcga
ggtccacctggctccagaggaaacccaggcgtgcctggtcctcccggacgtccagggggt
cctgtagaaggcgtaaaaggagacaaggggttgatgggagagcctggccgaagaggccca
cctggagctgtaggagacgtggggccaccgggtcatccgggagcaccaggtgtccccggt
cggctaggagccagaggtgatcctggattctatggatttccaggcatgaaaggggagaag
ggtaattcaggatttcccggaccaccgggacctccagggcaaactgggccaaaaggacca
cctggtgcacgtggagagcctggcacagtgaagatcatctcccttccaggaagcccaggc
ccacctggttcagctggagaaccagggatgccaggagaacccgggcctccgggaccacca
ggagatccaggaccctgtggaccaaaaggtaaaccaggggaggatggtccaccaggaagt
cctggaccaactggagaaaaaggcaacaaaggttctaaaggagagcaaggaccacctgga
tccgatggcctgccaggcctgaaggggaaacctggagacactggaccacctgccgcaggg
acagtgatgaggggctttgtctttacccggcacagccagaccacagcgattccctcctgt
ccagaagggacagagccactctatagtgggttttctcttctctttgtacaaggaaatgaa
caatcccatggacaggacctgggaacacttggcagctgcctgcagcgatttaccacaatg
ccattcttattctgcaatatcaacgatgtgtgtaattttgcttctcgaaacgattattcc
tactggctgtcaacaccagctatgataccaatggacatggctccaattaccggcagggcc
ctggagccttatattagcagatgcacagtctgtgaaggtcctgcaattgccatagctgtt
cacagccaaaccactgatatccccccctgtcctgctggctggatttctctctggaaaggc
ttttctttcatcatgttcacaagtgctggttcggagggtgctgggcaagcactcgcatcc
cccggctcctgcctggaagaattccgagccagtccatttatagaatgtcatggaagagga
acatgcaactactattcaaattcctacagtttctggttggcttcattagaccccaaaaga
atgttcagaaaacccattccatcaactgtgaaagctggggagttagaaaacataataagt
cgctgtcaagtgtgcatgaagaggagaccatga
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integrated database retrieval system
