Candidatus Izimaplasma bacterium HR1: KQ51_01230
Help
Entry
KQ51_01230 CDS
T03291
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mbj
Candidatus Izimaplasma bacterium HR1
Pathway
mbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ51_01230 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mbj03019
]
KQ51_01230 (pnp)
03016 Transfer RNA biogenesis [BR:
mbj03016
]
KQ51_01230 (pnp)
Enzymes [BR:
mbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KQ51_01230 (pnp)
Messenger RNA biogenesis [BR:
mbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KQ51_01230 (pnp)
Transfer RNA biogenesis [BR:
mbj03016
]
Prokaryotic type
tRNA degradation factors
KQ51_01230 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
DUF5856
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AIO19107
UniProt:
A0A088T4R4
LinkDB
All DBs
Position
1271176..1273347
Genome browser
AA seq
723 aa
AA seq
DB search
MSNVRLFEMDFDGRKLVVEHGEVAKQAAGAVLVRYEDTAVLSVCAIGKQPTTADFFPLMV
LYTEKMYAAGKIPGGFLKREGRPSDNETLTSRLIDRPIRPLFPNGFAYDLQIINTVISAN
TDNTPEMTAMFGSSLALGVSNIPFEGPIAGVNVGRIDGKFIVNPTQAQLELSDIELTIAG
TKDAVNMVESSAKIVNEEDMLQAIMFGHEWIKKLVAFQEEIIAEVGLPNGEFIYKVVTDE
IKEKVLTLVGTEIIAAVKIEEKLARGEAISAVTKKAVEQFEEDNLGMDKDDLRKLLGDVR
SVCSKTVQNEMRRLISEDKVRPDGRKLNELRPLESKIDMFVRTHGSAMFTRGQTQALALT
TLGSLSEHKKVDGMDEMVKKTFMLHYNFPQYSVGETGRYGGAGRREIGHGMLGERALRQV
MPNEEEFPYTVRVVSEVLESNGSSSQATICAGSMSLMAAGVPIKAPVAGIAMGLIKEGDF
YSILTDIQGMEDHYGDMDFKVAGTKDGITALQMDIKIAGISEEILREALEQARIARLQIL
DNMNSIIDTSRPQVSEHAPKVRLMQISPDKIRDVIGPGGKMITKIIESSNDVKIDIEQDG
RVTIMHTNYEDIETAVKLIEDIIREAKRGEVYSGKVVRVEKFGCFVELWKGTDGLCHISK
LAHERVAKVEDVCNLGDFITVKVIGIDDRGRIDLSRKDTLPKPKRVERPKTEVKKEAPKT
EKE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtgagattattcgaaatggatttcgacggaagaaaattagtcgttgagcat
ggtgaggtagctaaacaagctgctggtgctgttttagtaagatacgaagatactgctgta
ttaagtgtttgtgctatcggtaaacaaccaacaactgctgactttttcccactaatggtg
ttatacaccgaaaaaatgtatgctgcaggtaaaattcctggaggattcttaaaaagagag
ggaagacctagtgataatgaaactttaacatctagacttattgatagacctatcagaccg
ttattcccgaatggatttgcttatgatttacaaatcataaacacagttatcagtgcaaac
actgataatacacctgaaatgactgcaatgtttggatcaagtttagcacttggtgtaagt
aatattccttttgaaggaccaatcgctggagtaaacgtaggtagaattgatggtaaattt
atcgttaaccctacacaagcacaattagaattaagtgatattgaattaactatcgccgga
actaaagacgctgttaacatggtagaatctagtgctaaaatagttaatgaagaagatatg
ttacaagcaatcatgtttggacatgaatggattaagaaattagttgcattccaagaagag
attattgctgaagtaggtttaccaaatggtgagttcatctataaagtagttactgatgaa
attaaggaaaaagtattaactttagttggtactgaaataattgcagcagtaaaaattgaa
gagaaactagctcgtggtgaagcaatcagtgctgttactaagaaagcagtagagcaattt
gaagaagacaacctagggatggacaaagatgacttacgtaaattattaggggacgttaga
agcgtatgctctaaaacagttcaaaatgaaatgcgtagattaatttctgaagacaaagta
cgtcctgatggtcgtaaattaaatgaacttagacctttagagtctaaaattgatatgttt
gtaagaactcatggttctgctatgttcacacgtggacaaacacaagcattagctttaact
acactaggtagtttaagcgaacataaaaaagttgatggtatggatgaaatggttaaaaaa
acattcatgctacattataacttcccacaatattcagttggtgaaactggacgttacggt
ggagctggacgtcgtgaaattggtcacggtatgttaggtgaaagagcacttcgtcaagta
atgccaaacgaagaagaattcccttatacagtacgcgtagtgagtgaagtattagaatca
aacggaagtagctcacaagctactatctgtgctggtagtatgagtttaatggctgccggt
gttccaatcaaagctcctgtagctggaatcgcaatgggattaattaaagaaggagacttc
tattcaatcctaactgatattcaaggtatggaagatcattacggagatatggactttaaa
gtagctggtactaaagacggaatcactgctttacaaatggatattaaaatcgctggaatt
tcagaagaaatcttgagagaagcattagaacaagcaagaattgctcgtttgcaaatctta
gataacatgaattcaattattgatacatctagacctcaagtaagtgaacatgcgcctaaa
gttagattgatgcaaatctctccagacaaaatcagagacgttattggtcctggtggtaaa
atgattactaaaatcatcgaatcttcaaacgatgttaaaatcgatattgaacaagatggt
agagttacaatcatgcatacaaactacgaagatatcgaaactgctgttaaactaattgaa
gacatcatcagagaagcaaaaagaggtgaagtctattcaggtaaagtagtaagagtagaa
aaattcggatgctttgttgaattatggaaaggtactgacggattatgtcatatttctaaa
ttagcacacgaacgtgtagctaaagttgaagacgtttgtaaccttggcgacttcattact
gttaaagtaatcggaatcgacgacagaggacgtatcgacttatcaagaaaagatacatta
cctaaacctaaaagagtcgaaagacctaaaacagaagttaaaaaagaagcaccaaaaaca
gaaaaagaataa
DBGET
integrated database retrieval system
