Mycobacterium tuberculosis variant bovis BCG Mexico: BCGMEX_3236
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Entry
BCGMEX_3236 CDS
T01727
Symbol
rhlE
Name
(GenBank) Putative ATP-dependent RNA helicase
Organism
mbm
Mycobacterium tuberculosis variant bovis BCG Mexico
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AET20507
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All DBs
Position
3519644..3521227
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AA seq
527 aa
AA seq
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MTAVKHTTESTFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGK
TFAFGVPLLQRITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDA
AAVRRRLSVVSIYGGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDE
ADEMLDLGFLPDIERILRQIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSA
VHDATEQFVYRAHALDKVELVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAV
HGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGR
TGRAGRTGVAVTLVDWDELPRWSMIDQALGLGSPDPAETYSNSPHLYAELAIPATAGGTV
GPARKSQGRRRDTDCDGQKTAQHARNTPRRRRTRGGKPVTGHPGTNPISSPIVGGDATSE
PGSGTASDSGSDVVSGSRSGNGEAARRRRRRRRRPTHAQDGFAARAN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagtgaaacacacaactgaatcaacatttgccaaacttggagtccgcgacgaa
atagtccgcgcattaggggaagagggcatcaaacggccctttgctatccaggaactcacc
ctgccactcgcgctcgacggcgaggacgtgatcggccaggcccgcaccggcatgggcaaa
acgttcgcttttggcgtgccgctgctgcagcgcatcacctccggcgacggcacgagaccg
ctcactggcgctccgcgggccctggtcgtagtccccacccgcgagctgtgtctacaggtc
accgatgacctggccacggcgggcaagtacctgaccgccggccccgacacagacgacgct
gccgcggtacggcgccggctgtcggtggtgtccatctacgggggacggccctacgagccg
cagatcgaggcgctacgcgccggcgccgacgtcgtggtcggcaccccgggtcggctgctc
gacctgtgccagcagggccacctgcagctgggcgggctatccgtgttggtgctcgacgag
gccgacgagatgctcgacctgggcttcctgcccgatatcgagcgaatcctgcggcaaatt
cccgccgaccgacagtcgatgttgttttcggcgaccatgccggacccgatcatcacgctg
gcccgaacgttcatggtccggcccacgcatatccgggctgaggcaccacattcctcagcg
gttcacgacgcgaccgagcagttcgtctaccgcgcccatgcgttggacaaagtggagtta
gtcagccgggtgctgcaggctcgtgaccgcggcgcgacgatgatcttcacccgcaccaag
cggaccgcccagaaggtcgccgacgagttgaccgagcgcggtttcgcagtcggcgccgtg
cacggtgatctcggacagctggcacgcgagaaggcgctcaaggcgtttcgcactggcggc
atcgacgtattggtggccaccgacgtggccgcccgcggcatcgacatcgacgacgttacc
cacgtgatcaactatcagtgccccgaagacgagaagatgtacgtccaccgcatcggtcgc
accggccgtgccggccgaaccggggtcgcggtcaccctggtggactgggacgagctgccc
cgttggagcatgatcgaccaagcactgggcctgggctcccccgatccggccgagacatac
tccaactcgccgcatctgtatgccgagctggccatcccggccacggccggcggtaccgtc
ggcccggcgcgcaaatcgcagggcaggcgacgtgacaccgactgcgacggccagaaaacg
gcacagcacgcccgcaatacccccaggcgtcggcgcacccgcggcggcaaacccgtcacc
ggacaccccggcaccaacccaatcagcagcccaatcgtgggcggcgacgccacctcggag
ccgggctccggcaccgcatcagattccgggtccgatgttgtgtccggctcccggtccggc
aacggcgaagctgcgcgacgccgtcgtcgccgccgccgacgcccgacgcacgcccaggac
ggcttcgccgcgcgggctaactga
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