KEGG   Methanoregula boonei: Mboo_2156
Entry
Mboo_2156         CDS       T00578                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mbn  Methanoregula boonei
Pathway
mbn03030  DNA replication
mbn03410  Base excision repair
mbn03420  Nucleotide excision repair
mbn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mboo_2156
   03410 Base excision repair
    Mboo_2156
   03420 Nucleotide excision repair
    Mboo_2156
   03430 Mismatch repair
    Mboo_2156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mbn03032]
    Mboo_2156
   03400 DNA repair and recombination proteins [BR:mbn03400]
    Mboo_2156
Enzymes [BR:mbn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mboo_2156
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mboo_2156
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mboo_2156
DNA replication proteins [BR:mbn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mboo_2156
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mboo_2156
DNA repair and recombination proteins [BR:mbn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mboo_2156
   NER (nucleotide excision repair)
    Other NER factors
     Mboo_2156
   MMR (mismatch excision repair)
    Other MMR factors
     Mboo_2156
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABS56670
UniProt: A7IAA9
LinkDB
Position
2227311..2228963
AA seq 550 aa
MLFSEFAQVCEELEHLSGRLDMIEVISRALPDLAPDELPVFVRFVMGRIFPDWSAQKLGI
GPNLLYEAVRQAAGVKLETVITRINQQGDVGRAVEDILAKKTQVSWSHQDLELVYVYNKL
TGISSRGGVTSQKEKIRIAMLLLGDASPLEGRYLARIMLEELRIGVGEGTVREAIAKAFM
VDSALVEHAMQAINDLGEVARLAKKGPTALSDVHITPFHPVKMMLAQQGTIAGMIEDHGE
IAAEYKYDGSRFQFHKEGAKARMYSRRLEDVSEALPDVIDLLSKATSHDVILDGEVIAIK
DDRPMPFQSVLRRFRRRHDIAEAQEAIRMVPNVFDILYLDGETLIDLPFFERRKKLETVV
GKFVAPQVVSTDPQTIEQTYHDALAAGHEGIMLKVPASPYTPGQRGKNWIKIKPEVDTLD
LAVIGAEWGEGKRAHVFGSFLVACQDQGKLIPLSRVATGFSDEQLTEVYDLLKDAVISRT
GKEVRFEPELVFEVGYAELQVSPTYDAGFALRFPRFIRIRDDKDTTEIETLESIRGRYQR
QAKSAQAYTK
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgctgttctctgagttcgctcaggtttgcgaagaactggaacatctctccggccgtctg
gatatgatcgaggtgatcagccgggcgctgccggatctcgcaccggatgagctcccggtc
tttgtccggtttgtcatgggcaggatcttccccgactggagtgcccaaaaactgggaata
gggccgaatctcctctatgaggcagtccgccaggccgccggggtaaaactggagacagtc
atcacccggattaatcagcagggggacgttggaagagccgttgaggatatcctggcaaaa
aaaacccaggtttcctggtcacaccaggatctcgaactggtctatgtctacaacaaacta
acgggaatatcctcccgtggaggagttacatcccagaaagagaagatccgtattgccatg
ctcctcttaggtgatgcctcaccacttgaaggacggtacctcgcccggatcatgcttgaa
gagctccggataggggtgggtgagggaaccgtccgtgaagcaatcgcaaaagcgtttatg
gttgactctgcactggtcgagcatgcgatgcaggccatcaacgatctcggggaagtggca
cggcttgcaaagaaagggcccactgccctttcggatgtacatataacgcccttccatccg
gtgaagatgatgcttgcccagcagggaacgattgccggcatgatcgaagatcacggcgag
attgcagcagagtacaagtacgacgggtcccgtttccagttccacaaggagggggcaaaa
gcgaggatgtactcgcgccggctcgaagatgtcagcgaggcgctccccgatgtgattgac
cttctttccaaagcaacctcccatgatgtgatccttgatggtgaggtgatcgcgatcaag
gacgaccggcccatgccgttccagtcggtactccgcaggttccggcgccggcatgatatc
gccgaggcacaagaggcaatacgcatggtgccaaacgtcttcgatatcctctacctcgat
ggcgaaaccctcatcgatctgccattctttgaacggcgtaagaaactggaaaccgtggtc
gggaagttcgtggcaccacaagtggtaagcacagatccgcagacaatagagcagacatac
cacgacgcactcgccgcggggcatgagggaattatgcttaaggtaccggcgtccccctac
accccgggccagcggggaaagaactggatcaagatcaagccagaagtggacacactcgac
ctcgccgttatcggggccgagtggggcgaagggaaacgggcccatgtctttgggtcgttt
cttgttgcctgccaggaccagggtaagctgatcccgctctcccgggtggccaccgggttt
tcagacgagcagctgaccgaggtatacgatctcctcaaggatgcagtgatctcgcgcact
ggaaaagaggtacgctttgaaccggagctggtttttgaggtaggatatgccgaactccag
gtcagcccgacctatgatgccggatttgccctcaggttcccccggtttatccggatccgc
gatgacaaggataccaccgagatcgagaccctggagagcatcaggggccggtaccagcgg
caagcaaaatcggcacaggcatacacaaaatag

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