KEGG   Methanoregula boonei: Mboo_2156Help
Entry
Mboo_2156         CDS       T00578                                 

Definition
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mbn  Methanoregula boonei
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mbn00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    Mboo_2156
   03410 Base excision repair
    Mboo_2156
   03420 Nucleotide excision repair
    Mboo_2156
   03430 Mismatch repair
    Mboo_2156
Enzymes [BR:mbn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mboo_2156
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mboo_2156
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mboo_2156
DNA replication proteins [BR:mbn03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Mboo_2156
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Mboo_2156
DNA repair and recombination proteins [BR:mbn03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mboo_2156
   NER (nucleotide excision repair)
    Other NER factors
     Mboo_2156
   MMR (mismatch exicision repair)
    Other MMR factors
     Mboo_2156
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
2227311..2228963
Genome map
AA seq 550 aa AA seqDB search
MLFSEFAQVCEELEHLSGRLDMIEVISRALPDLAPDELPVFVRFVMGRIFPDWSAQKLGI
GPNLLYEAVRQAAGVKLETVITRINQQGDVGRAVEDILAKKTQVSWSHQDLELVYVYNKL
TGISSRGGVTSQKEKIRIAMLLLGDASPLEGRYLARIMLEELRIGVGEGTVREAIAKAFM
VDSALVEHAMQAINDLGEVARLAKKGPTALSDVHITPFHPVKMMLAQQGTIAGMIEDHGE
IAAEYKYDGSRFQFHKEGAKARMYSRRLEDVSEALPDVIDLLSKATSHDVILDGEVIAIK
DDRPMPFQSVLRRFRRRHDIAEAQEAIRMVPNVFDILYLDGETLIDLPFFERRKKLETVV
GKFVAPQVVSTDPQTIEQTYHDALAAGHEGIMLKVPASPYTPGQRGKNWIKIKPEVDTLD
LAVIGAEWGEGKRAHVFGSFLVACQDQGKLIPLSRVATGFSDEQLTEVYDLLKDAVISRT
GKEVRFEPELVFEVGYAELQVSPTYDAGFALRFPRFIRIRDDKDTTEIETLESIRGRYQR
QAKSAQAYTK
NT seq 1653 nt NT seq  +upstreamnt  +downstreamnt
atgctgttctctgagttcgctcaggtttgcgaagaactggaacatctctccggccgtctg
gatatgatcgaggtgatcagccgggcgctgccggatctcgcaccggatgagctcccggtc
tttgtccggtttgtcatgggcaggatcttccccgactggagtgcccaaaaactgggaata
gggccgaatctcctctatgaggcagtccgccaggccgccggggtaaaactggagacagtc
atcacccggattaatcagcagggggacgttggaagagccgttgaggatatcctggcaaaa
aaaacccaggtttcctggtcacaccaggatctcgaactggtctatgtctacaacaaacta
acgggaatatcctcccgtggaggagttacatcccagaaagagaagatccgtattgccatg
ctcctcttaggtgatgcctcaccacttgaaggacggtacctcgcccggatcatgcttgaa
gagctccggataggggtgggtgagggaaccgtccgtgaagcaatcgcaaaagcgtttatg
gttgactctgcactggtcgagcatgcgatgcaggccatcaacgatctcggggaagtggca
cggcttgcaaagaaagggcccactgccctttcggatgtacatataacgcccttccatccg
gtgaagatgatgcttgcccagcagggaacgattgccggcatgatcgaagatcacggcgag
attgcagcagagtacaagtacgacgggtcccgtttccagttccacaaggagggggcaaaa
gcgaggatgtactcgcgccggctcgaagatgtcagcgaggcgctccccgatgtgattgac
cttctttccaaagcaacctcccatgatgtgatccttgatggtgaggtgatcgcgatcaag
gacgaccggcccatgccgttccagtcggtactccgcaggttccggcgccggcatgatatc
gccgaggcacaagaggcaatacgcatggtgccaaacgtcttcgatatcctctacctcgat
ggcgaaaccctcatcgatctgccattctttgaacggcgtaagaaactggaaaccgtggtc
gggaagttcgtggcaccacaagtggtaagcacagatccgcagacaatagagcagacatac
cacgacgcactcgccgcggggcatgagggaattatgcttaaggtaccggcgtccccctac
accccgggccagcggggaaagaactggatcaagatcaagccagaagtggacacactcgac
ctcgccgttatcggggccgagtggggcgaagggaaacgggcccatgtctttgggtcgttt
cttgttgcctgccaggaccagggtaagctgatcccgctctcccgggtggccaccgggttt
tcagacgagcagctgaccgaggtatacgatctcctcaaggatgcagtgatctcgcgcact
ggaaaagaggtacgctttgaaccggagctggtttttgaggtaggatatgccgaactccag
gtcagcccgacctatgatgccggatttgccctcaggttcccccggtttatccggatccgc
gatgacaaggataccaccgagatcgagaccctggagagcatcaggggccggtaccagcgg
caagcaaaatcggcacaggcatacacaaaatag

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