Marinobacter sp. BSs20148: MRBBS_1828
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Entry
MRBBS_1828 CDS
T02323
Symbol
ybhD
Name
(GenBank) putative HTH-type transcriptional regulator ybhD
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
mbs
Marinobacter sp. BSs20148
Brite
KEGG Orthology (KO) [BR:
mbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mbs03000
]
MRBBS_1828 (ybhD)
Transcription factors [BR:
mbs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MRBBS_1828 (ybhD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
AFP30765
UniProt:
M1FCH3
LinkDB
All DBs
Position
1943173..1944096
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AA seq
307 aa
AA seq
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MSISIRQLKAFVAIASTGSFIEASERLRLSQPALSISIRKLELHIGGAVFTRSPRGAQLT
PEGLSFLPKAQRLVLDWEDAFEDLERLFKKQQGKITIAALPTLAAGFLPKVLAEYRAQFP
NIAINVNDVLASEIEGLVREGRADFGLSVQPAKNGYFDFEPLFEDRFVAVCPELHPLMEC
TEVSWAQLLKYPIIELNQLSSTRQAIERVLNDINLEMDLFCEVSQIGTAGRMVAAGLGVA
ALPSLSFRQISNEGLGWRTLIEPAVPRQLGIIKPPRAAQSAASNAMLDIIRYHASQFEEL
KNLGVDG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttcaatacgacaactcaaagcttttgtggcaatagcctcaaccggaagtttt
atcgaggcatctgaacggctgcggctctcacagccggcgctcagtatctcaattcgaaaa
ctggaattgcacattgggggagccgtattcacccgcagtcctcgcggggctcagctcaca
cctgaagggctctcttttcttcccaaagcccagaggttggtgctcgattgggaagatgct
ttcgaggatttggagagactgttcaaaaaacagcaagggaaaattacgattgcggcttta
cctacgcttgcagcgggttttttgcccaaagtgctggctgagtatcgtgcgcagtttccc
aatattgctataaatgtaaatgatgttttagctagtgaaattgagggcttggtaagagag
ggaagggccgactttggtttgtccgtacagcctgccaaaaatggatatttcgatttcgag
ccactctttgaggataggtttgttgcagtctgtccggaactccatcctctcatggagtgc
acagaggtaagttgggcgcaacttttgaagtatccaattattgaactcaaccaattatcc
agtacccgtcaggcaatcgagcgggtactgaacgacatcaatttagagatggatcttttt
tgcgaagtgagtcagatcggaacggccggtagaatggttgctgctggactgggtgtcgcc
gcattgccgtcactaagctttcgtcaaatttctaatgaagggttaggctggcgaacactc
attgagccagcagtgccccgccagcttgggataattaagccacccagagcagcacagtcc
gccgcgtcaaacgcaatgttagatattataagatatcatgcttcccaatttgaggagttg
aaaaatctgggagtggacggatga
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