Mycobacterium tuberculosis variant bovis BCG Tokyo 172: JTY_1224
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Entry
JTY_1224 CDS
T00864
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mbt
Mycobacterium tuberculosis variant bovis BCG Tokyo 172
Brite
KEGG Orthology (KO) [BR:
mbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mbt03021
]
JTY_1224 (sigI)
Transcription machinery [BR:
mbt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JTY_1224 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
BAH25512
LinkDB
All DBs
Position
1334714..1335586
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AA seq
290 aa
AA seq
DB search
MSQHDPVSAAWRAHRAYLVDLAFRMVGDIGVAEDMVQEAFSRLLRAPVGDIDDERGWLIV
VTSRLCLDHIKSASTRRERPQDIAAWHDGDASVSSVDPADRVTLDDEVRLALLIMLERLG
PAERVVFVLHEIFGLPYQQIATTIGSQASTCRQLAHRARRKINESRIAASVEPAQHRVVT
RAFIEACSNGDLDTLLEVLDPGVAGEIDARKGVVVVGADRVGPTILRHWSHPATVLVAQP
VCGQPAVLAFVNRALAGVLALSIEAGKITKIHVLVQPSTLDPLRAELGGG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacacgacccggtaagtgcggcctggcgggcgcatcgggcctacctggtggac
ctcgcgtttcgtatggtaggtgacatcggcgtggccgaagacatggtgcaagaggcattt
tcccgcttgctgcgggctccggtcggcgacatcgacgacgagcgtggctggctgatcgtg
gtcaccagccggctgtgcctggatcacatcaagtcggcgtcgacacgccgggagcgcccg
caggacatcgccgcatggcacgacggtgacgccagcgtgtcatcggttgacccggctgac
cgggtgactctcgacgacgaggtccggctggctttgctgatcatgctcgagcgcctcggc
cccgcggagcgggtggtgttcgtgctgcacgagatctttgggctgccctaccagcaaatc
gccacgacgattggcagccaggcctccacatgccggcagctggctcatcgggcccgtcgc
aagatcaacgaatcgcgcattgcggccagcgtggagccagcccagcatcgcgtcgtcacc
agagctttcatcgaagcctgctccaacggagacctggacaccctgctcgaggtgctggat
ccgggtgtcgccggcgagatcgacgcccgcaaaggcgttgtcgtcgtgggcgcggatcgg
gttggcccgaccatcctgcgccactggagtcaccccgccaccgtcctggtagcccagccg
gtgtgcggtcaaccggcggtgctggcctttgtcaaccgagcgcttgccggcgtgttggcc
ctgtcgatcgaggccggcaagatcacaaaaatccatgtcttagtgcagccttcaacattg
gacccgttacgggccgaactcggcggcggttag
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