Methylotuvimicrobium buryatense: EQU24_19795
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Entry
EQU24_19795 CDS
T05995
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mbur
Methylotuvimicrobium buryatense
Pathway
mbur03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mbur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EQU24_19795 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mbur03400
]
EQU24_19795 (recD)
Enzymes [BR:
mbur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EQU24_19795 (recD)
DNA repair and recombination proteins [BR:
mbur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EQU24_19795 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
Helicase_RecD
UvrD-helicase
AAA_22
SLFN-g3_helicase
UvrD_C
nSTAND3
Herpes_Helicase
AAA_16
NTPase_1
T2SSE
CbiA
AAA_28
DEAD
AAA_24
AAA_12
TrwB_AAD_bind
AAA_5
ResIII
DRE2_N
ATPase
SRP54
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QCW84225
UniProt:
A0A4V1IKA5
LinkDB
All DBs
Position
complement(4448522..4450153)
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AA seq
543 aa
AA seq
DB search
MTEEPTFTRLDMAFSRFLSRRSALTGAAQDNFEKLIARLSFEQNQGHSCIRIDAKAREAV
LASGLASTTDTAPLIVEDDRLYLQRYWAYEKNLVNRIYAMTRVNVSHADAEALLDRYFPT
TTGETDWQREAAKTALNRTFCIITGGPGTGKTTTIVKILALLQELAERSLYIALAAPTGK
AAMRLQESIGNSKSTLPCAEAIKQFLPESVTTLHRLLGSRPPSPYFRHNAEKPLPFDLVV
VDEASMVDLALMSKLVDALKPSARLILLGDKDQLASVESGAVLADLTAALPNHTVELKKA
HRFDMTIKNLAEAVNLQHPEAAWSSLQAGYENIGLLNQEAIAYIVGQRRDYLRAIESSND
IEHIFNAFKRFQVLCANRAGKNSVADINSQVERLLASIGHIDPIGTWYHGRPVMITQNDA
ALQLYNGDIGLCLKDAEQSGKLMVFFQRPDGSIKKCLPARLPHCETVYAMTIHKSQGSEF
DEILIALPDQHNPVLTKELLYTAITRARKSVIILADQKVFNETVLSKIDRFGGLAQKLTC
TAD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaacctacttttacccgcctcgatatggctttttctcgttttttgagccgg
cgtagcgccttgaccggtgccgcgcaagacaatttcgaaaaactgatcgcacgtctttcc
ttcgagcaaaatcaagggcatagttgtatccgcatcgatgccaaagcccgtgaggcagtc
ttggcgtcaggtctggcttcgacgaccgataccgcgccgttaatagttgaagacgaccgg
ctttatctgcagcgttattgggcctatgaaaaaaatttggtcaaccggatctatgcaatg
acccgtgtcaatgtctcccatgctgacgccgaggccttattggaccgctacttcccgacc
actacaggagaaaccgactggcagcgtgaagcagccaaaaccgcgcttaatcgaacgttc
tgcatcattaccggcggtcccgggactggtaaaaccacaactatcgttaagattctggct
ttgctgcaggaattggctgaacgctcgttatatatcgccctggccgcgccgaccggaaaa
gccgcaatgcgtctgcaggagtcgataggtaacagcaagagcaccctgccttgtgcggaa
gctattaaacaattccttcccgaatcggtcacaaccctgcatcgcctgctaggctctcgt
ccgccttcgccttatttccggcataacgccgaaaaacccctgcctttcgatttggtcgtg
gtcgatgaagcctcgatggtcgatttagcgttaatgagtaaattggtcgatgcactcaaa
cccagtgcccgtttgatcttactcggagacaaagatcaattggcatcggtcgaatcgggc
gcggtattggcagatttgaccgcagcgttgccgaatcataccgtcgaactaaaaaaagca
cacagattcgatatgacgatcaaaaacctggccgaagcggtcaatttgcagcatcctgaa
gccgcttggtcgtcgttgcaggcaggttatgagaacatcggcttattgaatcaagaagca
atcgcctatattgtcggacagagacgcgattatttacgcgcgatcgagagttcgaatgat
atcgagcatatttttaatgccttcaagcgatttcaagtgctctgtgcgaatcgggccgga
aaaaatagcgtcgccgatattaatagccaagttgaacgcctactagcctcaatcggtcat
atcgaccctatcgggacttggtatcatgggcgtccggtcatgatcacgcagaacgatgcc
gcgctgcaactttataacggcgatatcggcctgtgtctgaaagacgcagagcaaagcggt
aaattgatggtgttttttcagcgccccgacggtagcatcaaaaaatgcctgccggctcga
ttgccgcattgcgaaaccgtatacgcaatgacgatccataaaagccagggttcggaattc
gacgaaattcttattgctcttccggatcaacataatccggtgttgaccaaagagttgctc
tataccgcgattacccgcgcccggaaatcggtcataatactggccgatcaaaaggttttc
aacgaaaccgtgctgagtaaaatcgatcgcttcgggggcttggcgcaaaaactgacgtgc
acagccgactaa
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