Methanosarcina barkeri Wiesmoor: MSBRW_0096
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Entry
MSBRW_0096 CDS
T03839
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mbw
Methanosarcina barkeri Wiesmoor
Pathway
mbw00630
Glyoxylate and dicarboxylate metabolism
mbw01100
Metabolic pathways
mbw01110
Biosynthesis of secondary metabolites
mbw01120
Microbial metabolism in diverse environments
mbw01200
Carbon metabolism
Module
mbw_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mbw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSBRW_0096
Enzymes [BR:
mbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSBRW_0096
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB49349
UniProt:
A0A0E3QI40
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All DBs
Position
100712..101998
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AA seq
428 aa
AA seq
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MQRDYIDAGYSPKDTDLICEFHIEPSAGVNFEEAATHMAGESSIDSWTEIATLSPELAAR
LKPHVFYMDEDAQTVRVAYSEELFELGSVPQVLSAVAGNILSMKIVDNLRLQDIAFPKSM
LREFKGPGFGLSGIRELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNKFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPAGWTALQTLREEADDAGLALHAHRCMHSAYTRNPRHGISMLVVAKLCRLIGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADESQHVLAQDWGGLKPMFPVASGGLAPT
MIPDLYTIFGRDVIMQFGGGIHAHPMGTKAGAAACRQALEASLEGVSLQEYAKNHRELEA
AINKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagggattatatagacgcgggctacagcccgaaggatactgatcttatctgtgaa
tttcatatcgaaccgtcagcaggagtgaattttgaggaagctgcaacccatatggcaggg
gaaagttctatagattcctggactgaaattgctacgctgagtcccgaacttgcagccagg
ctaaagccacatgttttttacatggatgaggacgcacagaccgtaagggtagcttattcg
gaagagctctttgaacttggttcggttccgcaggtactcagtgcagttgcaggaaatatc
ttgagtatgaaaatcgttgacaatctcagactccaggatatagctttcccgaagtcaatg
cttcgagaattcaaaggtcctggattcgggttgtcaggaatcagggaacttacaggtgtg
caagacaggcctctcataggaactattgtcaagccgaaagttggattaacctccgaaaaa
catgctgaggttgcttacaattcctttgcaggaggctgcgaccttgttaaagatgatgag
aaccttacggatcagaaatttaacaaatttgaaaaaagagctgaacttaccctgaagctt
gcagaaaaggcagaatctgagaccggagagcgtaaaatgtatctctgcaacattactgcc
cctacctgtaaggaaatgatccgccgcatgaacatccttaaagacctgggtgccagctat
gcaatgatcgacatcgtacctgccggctggactgcacttcagaccctgagggaagaagca
gacgatgcaggactagctctccacgctcaccgatgcatgcattcagcctataccaggaac
ccgcgacacggaataagcatgcttgtagttgccaagctctgcagattgatcgggcttgac
cagcttcacataggtacggttgttgggaagatgcacggagaaaaacacgaggttctgtct
ctccgtgacgagtgtgtgctagacaatgtgcctgcagatgaaagccagcatgtccttgct
caggactggggagggttgaagcccatgtttccggttgcttccggaggtcttgcccctact
atgattcctgacctgtacactatctttggaagagatgttattatgcaatttggtggtggg
attcacgctcatccaatgggaacaaaagctggagccgctgcttgcagacaggcactcgaa
gcatctcttgaaggagttagcctgcaggaatatgcgaaaaaccacagagaacttgaagcc
gccatcaataagtggctgaagaaataa
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