Micromonospora carbonacea: HXZ27_02630
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Entry
HXZ27_02630 CDS
T06722
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mcab
Micromonospora carbonacea
Pathway
mcab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HXZ27_02630
09124 Replication and repair
03420 Nucleotide excision repair
HXZ27_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcab03021
]
HXZ27_02630
03400 DNA repair and recombination proteins [BR:
mcab03400
]
HXZ27_02630
Enzymes [BR:
mcab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXZ27_02630
Transcription machinery [BR:
mcab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HXZ27_02630
DNA repair and recombination proteins [BR:
mcab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HXZ27_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QLD23259
UniProt:
A0A1C4YQK1
LinkDB
All DBs
Position
complement(566509..568188)
Genome browser
AA seq
559 aa
AA seq
DB search
MSGGPLIVQSDKTLLLEIDHPDAQSCRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEAVVDALLKYSRYPVPHALLVDVAETMDRYGRLQLANDPAHGLVLRALDRVVLIEVA
KSKKLAGMLGAKLDDDTIAVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAEGGK
DGGRPFTLRSYQREAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELIARTSLTEEEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VVYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEQ
QGWIAPAQCTEVRVTLTDAERMSYATAEAEERYRMAATARTKLPVVRALVDRHPQEQVLV
IGGFLDQLHQLGEYLDAPIVQGSTTNKERERLFDAFRSGEVRTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPPLPSVD
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggtggaccactgatcgtgcagtcggacaagacgctgctgctggagatcgaccac
cccgacgcccagtcctgccggatggcgatcgccccgttcgccgagctggaacgctcgccg
gagcacgtgcacacctaccggctgaccccgctgggcctgtggaacgcccgcgccgccggc
cacgacgccgaggccgtggtggacgcgctgctgaaatatagccgctacccggtgccgcac
gcgctgctggtcgacgtggccgagacgatggaccggtacggccggctccagctcgccaac
gatccggcgcacggcctggtgctgcgcgccctggaccgggtggtgctgatcgaggtcgcc
aagagcaagaagctggccgggatgctcggcgcgaagctcgacgacgacacgatcgcggtg
cacccgtcggagcgggggcggctcaagcaggcgctgctgaagctgggctggccggcggag
gacctcgccgggtacgtcgacggcgaggcgcaccccatcgagctggccgagggcggcaag
gacggcggtaggccgttcacgctgcggtcgtaccagcgggaggccgtggaggcgttctgg
gccggcgggtccggcgtggtggtgctgccctgcggcgcgggcaagaccctggtcggggcg
gcggccatggccgaggcgaaggccaccacgctgatcctggtcaccaacacggtcgccggt
cggcagtggaagcgggagctgatcgcccgcacctcgctgaccgaggaggagattggcgag
tacagcggtgagcgcaaggagatccggccggtcaccatcgccacgtaccaggtgctcacc
tcgcggcgcggcggcgcgttcacccacctggacctgttcggggcccgcgactggggcctg
gtcgtctacgacgaggtgcacctgctgcccgcgccgatcttccggttcaccgcggacctc
caggcccgccgccgcctcggcctcaccgcgaccctggtccgcgaggacggccgggagggc
gacgtgttcagcctgatcgggcccaagcggtacgacgcgccgtggaaggacatcgagcag
cagggctggatcgccccggcgcagtgcaccgaggtacgggtgaccctcaccgacgccgag
cggatgtcgtacgcgacggcggaggcggaggagcgctaccggatggcggcgaccgcccgc
acgaagctgccggtggtgcgggcgctcgtcgaccggcatccccaggagcaggtgctcgtc
atcggcggcttcctcgaccagctgcaccagctcggcgaatacctggacgcgccgatcgtg
cagggctccaccacgaacaaggagcgggagcggctgttcgacgcgttccggtcgggcgag
gtacgcacgctggtgatctcgaaggtcggcaacttctccatcgacctgcccgaggcggcg
gtggcgatccaggtgtcgggcacgttcgggtcgcggcaggaggaggcgcagcggctgggc
cgggtgctgcggccgaaggccgacgggcggcaggcgcacttctacacggtcgtctcccgg
gacaccatcgacaccgagtacgcggcgcaccggcagcgcttcctggcggagcagggctac
gcgtacacgatcgtggacgccgacgacgtcctcggcccgccgctgcccagcgtggactga
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