Mus caroli (Ryukyu mouse): 110284880
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Entry
110284880 CDS
T05910
Symbol
Pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X2
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal01521
EGFR tyrosine kinase inhibitor resistance
mcal04010
MAPK signaling pathway
mcal04014
Ras signaling pathway
mcal04015
Rap1 signaling pathway
mcal04020
Calcium signaling pathway
mcal04072
Phospholipase D signaling pathway
mcal04151
PI3K-Akt signaling pathway
mcal04510
Focal adhesion
mcal04540
Gap junction
mcal04630
JAK-STAT signaling pathway
mcal04810
Regulation of actin cytoskeleton
mcal05165
Human papillomavirus infection
mcal05200
Pathways in cancer
mcal05206
MicroRNAs in cancer
mcal05214
Glioma
mcal05215
Prostate cancer
mcal05218
Melanoma
mcal05230
Central carbon metabolism in cancer
mcal05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110284880 (Pdgfrb)
04014 Ras signaling pathway
110284880 (Pdgfrb)
04015 Rap1 signaling pathway
110284880 (Pdgfrb)
04630 JAK-STAT signaling pathway
110284880 (Pdgfrb)
04020 Calcium signaling pathway
110284880 (Pdgfrb)
04072 Phospholipase D signaling pathway
110284880 (Pdgfrb)
04151 PI3K-Akt signaling pathway
110284880 (Pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110284880 (Pdgfrb)
04540 Gap junction
110284880 (Pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110284880 (Pdgfrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110284880 (Pdgfrb)
05206 MicroRNAs in cancer
110284880 (Pdgfrb)
05230 Central carbon metabolism in cancer
110284880 (Pdgfrb)
05231 Choline metabolism in cancer
110284880 (Pdgfrb)
09162 Cancer: specific types
05214 Glioma
110284880 (Pdgfrb)
05218 Melanoma
110284880 (Pdgfrb)
05215 Prostate cancer
110284880 (Pdgfrb)
09172 Infectious disease: viral
05165 Human papillomavirus infection
110284880 (Pdgfrb)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
110284880 (Pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mcal01001
]
110284880 (Pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mcal04090
]
110284880 (Pdgfrb)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110284880 (Pdgfrb)
Protein kinases [BR:
mcal01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
110284880 (Pdgfrb)
CD molecules [BR:
mcal04090
]
Proteins
110284880 (Pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
ig
Ig_3
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
110284880
NCBI-ProteinID:
XP_021006487
Ensembl:
MGP_CAROLIEiJ_G0022318
UniProt:
A0A6P5NZ10
LinkDB
All DBs
Position
18:57834008..57873990
Genome browser
AA seq
1098 aa
AA seq
DB search
MGLSGVMPASVLRGQLLLSLLWLLGPQTSRGLVITPPGPEFVLNISSTFVLTCSSSAPVM
WEQMSQVPWQEAAMNQDGTFSSVLTLTNVTGGDTGEYFCVYNNSLGPELNERKRIYIFVP
DPTMGFLPMDSEDLFIFVTDVTETTIPCRVTDPQLEVTLHEKKVDIPLHVPYDHQRGFTG
TFEDKTYICKTTIGDREVDSDTYYVYSLQVSSINVSVNAVQTVVRQGESITIRCIVMGND
VVNFQWTYPRMKSGRLVEPVTDYLFGVPSRIGSILHIPTAELSDSGTYTCNVSVSVNDHG
DEKAINITVIENGYVRLLETLGDVEIAKLHRSRTLRVIFEAYPTPSVLWLKDNRTLGDSG
AGELVLSTRNVSETRYVSELTLVRVKVSEAGYYTMRVFHEDDEVQLSFKLQVNVPVRVLE
LSESHPANGEQIIRCRGRGMPQPNVTWSTCRDLKRCPRKLSPTPLGNSSKEESQLETNVT
FWEDDQEYEVVSTLRLRHVDQPLSVRCMLQNSMGGDSQEVTVVPHSLPFKVVVISAILAL
VVLTVISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPVQLPYDSTWELPRDQLV
LGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH
LNVVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQRHSNKHCPPSAELYSNALP
VGFSLPSHLNLTGESDGGYMDMSKDESVDYVPMLDMKGDIKYADIESSSYMAPYDNYVPS
APERTYRATLINDSPVLSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVK
ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGG
TPYPELPMNDQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFETRPPFSQLVLLLERL
LGEGYKKKYQQVDEEFLRSDHPAILRSQARFPGIHSLRSPLDTSSVLYTAVQPNESDNDY
IIPLPDPKPDAADEGLPEGSPSLASSTLNEANTSSTISCDSPLELQEEPQQAEPEAQLEQ
PQDSGCPEPLAEAEDSFL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgggactttcaggagtgatgccagcttcagtcctcagaggccagttgttgctgtccctg
ttatggctcctgggaccacagacctcccggggcctagtcatcacgccccctgggccagag
tttgtcctcaacatctccagcacctttgttctgacctgctcgagttcagctccggtgatg
tgggaacagatgtcccaggtgccctggcaagaagcagccatgaatcaggacggcaccttc
tccagtgtgctgacactgaccaatgtcactgggggagacactggggaatacttttgtgtc
tacaacaactcgctagggccggagctcaatgagaggaagcgtatctatatcttcgtgcca
gatcccaccatgggcttcctccctatggactccgaggacctgttcatttttgtcacggat
gtcactgagacgacaattccgtgccgagtgacagacccccagctggaggtaacgctacat
gagaagaaagtggacatccccctgcatgtaccctacgaccaccagcgaggtttcactggt
acttttgaggacaagacttacatttgcaaaaccaccattggggacagggaagtggactcc
gatacttactacgtctacagcctccaggtgtcatccatcaacgtctctgtgaatgccgtg
cagactgtggtccgccagggtgagagcatcaccatcaggtgcattgtgatgggcaatgat
gtggtgaacttccaatggacatacccccgcatgaagagtgggcggctggtggagccagtg
acagactacctctttggagtgccctcccgcattggctccatcctgcatatccccacggct
gagctgagtgattcgggcacctatacttgcaacgtgtcagtgagtgtgaacgaccatgga
gatgaaaaagccatcaacatcactgtgatcgagaatggctacgtgcggctgctggaaaca
ctgggagatgtagaaattgctaagctgcaccggagccggacgctgcgggtgatatttgag
gcttatccgacgccctctgtcctgtggctcaaggacaaccgtaccttgggcgactccggc
gctggcgagttagttctgtctactcgcaacgtgtctgagacccggtacgtgtcagaactg
accctggtacgtgtgaaggtgtcagaagcgggctactatactatgcgagtcttccacgag
gacgatgaggtccagctctccttcaagctgcaggtcaatgtccccgtccgtgtgctggag
ctgagtgagagtcaccctgccaatggggagcagataatccgctgtcgtggccggggcatg
cctcagccaaatgtcacctggtctacctgcagagacctcaaaaggtgtccacgaaaactg
tcacccacacccttggggaatagttccaaggaggagagccagctagaaacgaatgtgact
ttctgggaggacgatcaggaatacgaggtggtgagcacactgcgtctgcgccacgtggat
cagccactgtccgtacgctgcatgctgcagaactccatgggcggagattcgcaggaggtc
accgtggtcccacattccttgcccttcaaagtggtggtgatctcagccatcctggcctta
gtggtccttaccgtcatctctctcatcatcctcatcatgctgtggcagaagaagccacgc
tatgagatccgatggaaggtcattgagtctgtgagctctgacggtcatgagtacatctac
gtggaccctgtgcagttgccttacgactccacgtgggagctgccacgggaccagcttgtt
ctgggacgcactcttggctctggggctttcggacaggtggtggaggccacggctcacggt
ctgagccattcgcaggccaccatgaaagtggctgtcaagatgctgaaatcaacagccaga
agtagcgagaagcaagccttaatgtcggagctgaagattatgagtcaccttggaccccac
ctgaacgtggtcaacctgctgggggcctgcaccaaaggagggcccatctacatcatcacg
gaatactgccgctacggtgacctggtggactatctgcaccggaacaaacacaccttcttg
cagcgacactccaacaagcattgtccgccaagtgctgagctctacagcaacgccctgcca
gtggggttctccctacccagccacttgaacctgactggggagagtgacggtggctacatg
gatatgagcaaggatgaatctgtagattacgtgcccatgttggacatgaaaggagacatc
aaatatgcagacattgagtcctccagctacatggccccttatgataactatgtcccatct
gcccctgaaaggacctatcgtgccaccttaatcaacgactcaccagtgctcagctacaca
gacctcgtgggcttcagctaccaagtggccaacggcatggacttcttagcctctaagaac
tgtgttcaccgagacttggcggccaggaatgtgctcatctgcgagggcaagctggtcaag
atctgtgactttggcctggctcgagacatcatgagggactcaaactacatctccaaaggc
agtacctttctgcctctgaagtggatggccccagagagcatcttcaacagcctctacacc
accttgagtgatgtgtggtcttttgggatcctactctgggagatcttcacactgggtggt
accccttacccagagctgcccatgaacgaccagttttacaatgccatcaagaggggctac
cgcatggcccagcctgctcatgcctcggatgagatctatgagatcatgcagaaatgctgg
gaagaaaagtttgagactcgaccccccttctcccagctggtgctgctcctggagaggctt
ctgggtgaaggctataaaaagaaataccagcaggtagacgaggagttcctgaggagtgac
catccggccatcctgaggtcccaagcccgctttccggggatccacagcctccgatcccct
ctggacaccagctctgttctctacactgccgtgcagcccaatgagagtgacaatgactac
atcatccccttacctgaccccaagcctgacgctgctgatgaaggtctcccagaggggtcc
cccagccttgccagttccaccttgaatgaagccaacacttcctccaccatctcctgcgac
agtcccctggagctccaagaagagccacagcaagcagagcctgaggcacaactggagcag
ccacaggattcaggctgcccagaacctctggctgaagcagaggacagcttcctgtag
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