Mus caroli (Ryukyu mouse): 110290830
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Entry
110290830 CDS
T05910
Symbol
Pdlim5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X4
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110290830 (Pdlim5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110290830 (Pdlim5)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
110290830 (Pdlim5)
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GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
DUF4749
PDZ_2
Motif
Other DBs
NCBI-GeneID:
110290830
NCBI-ProteinID:
XP_021013304
Ensembl:
MGP_CAROLIEiJ_G0025691
UniProt:
A0A6P5PJ59
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Position
3:complement(135510556..135670034)
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AA seq
591 aa
AA seq
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MSNYNVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQG
MTHLEAQNKIKACTGSLNMTLQRASAAAKTEPVTVQKGEPKEVVKPVPITSPAVSKVTST
TNMAYNKAPRPFGSVSSPKVTSIPSPSSAFTPAHAATSSHASPTPVATATPLHLSASGLH
VSANLSADQCSSPPNTGKPAVNVPRQPTVTSVCSESAQELAEGQRRGSQGDIKQQNGPPR
KHIVERNTEFYHIPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLTESEN
DNTKKANSTQEPSQQSVSSGASPLSASEGPESPGSSRPAVAGLRSAAAFKPVGSTGGKSP
SWQRPNQAAPSTGRISNNARSSGTGASVGPPQPSDQDTLVQRAEHIPAGKRTPMCAHCNQ
VIRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKFFAPECGRCQRK
ILGEVINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYYALFGTICRGCEFPI
EAGDMFLEALGYTWHDTCFVCSVCCESLEGQTFFSKKDKPLCKKHAHSVNF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactacaatgtgtcattggtcggcccagctccttggggtttccggctccaaggt
ggcaaggatttcaacatgcctctgacaatctctagtctgaaggatggtggcaaggcatct
caggcacatgtcagaataggcgacgtggttctcagcatcgatgggatcagtgcacaggga
atgacgcatcttgaagcccagaacaagattaaggcttgtacgggctccttgaatatgact
ctacaaagagcttcagctgcagccaagactgagccggttaccgtccagaagggtgaacct
aaggaagtagttaagcctgtgcccattacatctcctgctgtatccaaagtcacttccact
accaacatggcctacaataaagcaccacggccctttggttctgtgtcttcaccaaaagtc
acatccatcccatcaccatcgtctgcgttcaccccagcccatgccgccacttcatcacat
gcttcccccacacccgtggccactgccactcccctccacctctctgcatccggactgcat
gttagtgccaatcttagtgctgaccagtgttcatctccaccaaacactggtaaacctgca
gttaatgtcccacggcagcccacagtcaccagcgtgtgttccgagtctgctcaggagcta
gcagagggacagagaagaggatcccagggtgacattaagcagcaaaatggcccaccaaga
aaacatattgtggagcgcaacacggagttttatcacatacccactcacagtgatgccagc
aagaaacggctgattgaggacactgaggactggcgcccccggactggaacgactcagtct
cgttctttccggatccttgcccagatcactgggactgagcatctgacagaatctgaaaat
gacaatacgaagaaggcaaatagcacccaggagccttctcagcaatcggtgtcatctgga
gcttcacctctgagtgcgtctgagggcccagagagcccaggttccagcagacccgcggtg
gctggcctccgctccgctgctgctttcaagcctgtaggatccaccggcggcaagtcacct
agctggcagcgtccaaaccaagcagcaccttctactgggagaatttcaaacaatgcacgt
tcttcaggtacaggggcatctgtggggcctccccagccaagtgaccaagacacacttgtg
cagagagctgaacacattccagcgggcaagcggacccccatgtgtgcccactgcaaccaa
gttatcaggggaccttttcttgtggctctggggaagtcctggcatccagaagaatttaac
tgtgctcattgcaaaaacacaatggcctacataggctttgtagaggagaaaggagccctg
tactgcgagctatgctatgagaagttctttgctcctgaatgtggccggtgccagaggaag
atccttggagaagtcatcaatgctttgaagcagacctggcatgtatcctgttttgtgtgt
gtggcctgtggaaaacccattcgtaataatgttttccacttggaagatggcgagccctac
tgtgagacagactactatgccctttttggaacaatatgtcgtggatgtgaattccccata
gaggctggtgacatgttcctggaagctctgggatacacttggcatgatacttgctttgtg
tgctctgtgtgttgtgaaagtttggaagggcagacatttttctccaaaaaggacaagcca
ctttgcaaaaaacatgctcattctgtgaatttttga
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