Mus caroli (Ryukyu mouse): 110299671 Help Entry 110299671         CDS       T05910                                  Symbol Col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism mcal  Mus caroli (Ryukyu mouse) Pathway mcal04151   PI3K-Akt signaling pathway mcal04510   Focal adhesion mcal04512   ECM-receptor interaction mcal04820   Cytoskeleton in muscle cells mcal04926   Relaxin signaling pathway mcal04933   AGE-RAGE signaling pathway in diabetic complications mcal04974   Protein digestion and absorption mcal05146   Amoebiasis mcal05165   Human papillomavirus infection mcal05200   Pathways in cancer mcal05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:mcal00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110299671 (Col4a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110299671 (Col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110299671 (Col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110299671 (Col4a1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     110299671 (Col4a1)   09154 Digestive system    04974 Protein digestion and absorption     110299671 (Col4a1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110299671 (Col4a1)   09162 Cancer: specific types    05222 Small cell lung cancer     110299671 (Col4a1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110299671 (Col4a1)   09174 Infectious disease: parasitic    05146 Amoebiasis     110299671 (Col4a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110299671 (Col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mcal04147]     110299671 (Col4a1)    00536 Glycosaminoglycan binding proteins [BR:mcal00536]     110299671 (Col4a1) Exosome [BR:mcal04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110299671 (Col4a1) Glycosaminoglycan binding proteins [BR:mcal00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110299671 (Col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110299671 NCBI-ProteinID:  XP_021025073 Ensembl:  MGP_CAROLIEiJ_G0030814 UniProt:  A0A6P5QCG0 LinkDB All DBs Position 8:complement(7641267..7757584) Genome browser AA seq 1669 aa AA seqDB search MGPRLSVWLLLLLAALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGLPGLQGVI GFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHVPGTLLKGERGFPGI PGMPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGPP GVPGQAQVKEKGDFAPTGEKGQKGEPGFPGAPGYGEKGEPGKQGPRGKPGKDGEKGEKGS PGFPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGTRPLGEKGDRGYPGAPGLRGEPGP KGFPGTPGQPGPPGFPTPGQAGAPGFPGERGEKGDQGFPGVSLPGPSGRDGAPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGLTGEVGQKGQKGESCLACDTEGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLIGQPGAKGEPGEIFFDMRLK GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGDI GPPGPPGVGPIGPVGEKGQAGFPGGPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGSPGFP GPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGSPGRPGFNG LPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGI RGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPG LPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGLSGTPGSPGLPGPKGSVGGMGLPG SPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGE KGEKGSAGTPGMPGSPGPRGFPGNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLPGT PGPTGPAGQKGEPGSDGIPGSAGEKGEPGTPGKGLPGFPGSKGDKGSKGEVGFPGLAGSP GIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGFPG INGPKGDKGNQGWPGAPGIPGPKGDPGFQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKG LPGLQGVKGDQGDQGVPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPGLKGLQGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcagcgtctggcttctgctgctgctcgccgcccttctgctccacgag gagcgcagccgagccgctgcgaagggcgattgtggtggctctggctgtggaaaatgtgac tgtcatggcgtgaagggacaaaagggagaaagaggcttgccagggttacaaggtgtcatt ggatttcctgggatgcaaggacctgaggggccacatggaccaccaggacaaaagggtgat gctggagaacctggacttcctggcacaaaagggacgaggggaccccctggagcagctggc taccctgggaatcccggacttcctggcattcctggccaagatggccctccaggtccccca ggtatcccaggatgcaacggtacaaagggagagagagggccgctcggtcctcctggcttg cctggattcagcgggaatcctggaccaccagggttaccaggaatgaagggagatcctggt gaaattctcggccacgttcctggaacactgctgaaaggggagagaggatttcctggtatc cccgggatgccgggctcaccagggttgccaggactgcagggacctgtgggtcctccggga tttactggaccaccgggtcctccaggccctcctggacctcctggagaaaaggggcagatg ggctccagcttccaaggaccaaaaggtgacaagggagagcaaggggtcagtggtcccccg ggagttcctggacaggcacaagttaaggaaaaaggagactttgccccaacaggagaaaag ggtcagaaaggtgaacccggattcccgggagcaccagggtatggagagaaaggtgaacct ggcaagcaagggcctcggggaaaacctgggaaagacggtgaaaaaggagaaaaggggagc ccgggctttcctggcgattccgggtacccaggtctcccaggccggcagggcccgcaggga gagaagggtgaagctggacttccaggtccccccggaactgtgataggcaccaggcctttg ggagagaaaggagatcgaggctacccaggagcaccagggttgagaggagagcctggccct aaaggtttccctggaacaccaggccaaccaggccctccaggcttccctactccaggccag gctggtgctccaggcttccccggtgaaaggggagaaaaaggtgaccagggatttccaggc gtgtcattaccaggaccaagtggaagagatggagccccagggcctcccggccctcctggc ccccctgggcagccaggccacacaaatggcattgtggagtgtcaacctggaccacccggg gaccagggccctcctgggactccaggacagccaggtttgacaggtgaagttggacagaaa ggtcagaaaggagagagctgccttgcctgtgacacagaaggtcttcgtggccctccaggg ccacaggggcctccgggagagattggtttccctggacaacctggggctaaaggtgaccga ggcctgcccggcagagatggtcttgaaggattgccgggtccacaaggttcaccagggctt ataggccagcctggagctaagggagagcctggagagatattttttgacatgcgactcaaa ggtgacaaaggagacccaggttttccaggacagcctggcatgccaggaagagcaggaact cccggaagagatggccacccaggactccctggacccaaaggctctccgggttcaatagga ttgaaaggagagcgaggtccccccggaggagttggcttccctggtagtcgtggagacatc ggccctcctggacccccaggagttggtcccattggtcctgttggtgaaaaaggacaagca ggctttcctggaggccctgggtccccaggtcttccaggcccaaagggtgaggcaggaaag gttgtcccactccctggccccccaggagctgcaggacttccaggatcccctgggttccca gggccacaaggtgaccgaggcttcccaggaaccccaggacgtccaggcatcccaggagag aaaggtgctgtgggccagccgggaattggatttcctgggcttcctggccccaaaggtgtt gatggcttgcctggagagataggacggcctggaagtccaggtcgccctggatttaacggc ttacctggcaacccaggacctcaaggtcaaaagggagaacctggcattgggcttccaggg ctcaaagggcaaccaggccttccaggcattcccggcacacctggcgagaagggcagcatc gggggaccaggcgttccaggagaacaggggttgactggccccccaggactgcaggggatc agaggtgacccaggacctcctggagttcaaggccccgcaggtccaccaggggtcccagga atagggccacccggagctatgggccctcccggagggcaaggaccaccagggtcatcaggt ccacctggaattaaaggagagaaagggttccctggattcccaggactggatatgcctggc cccaaaggcgataaaggctctcaaggacttcctggcctcacaggacagtcaggcctccct ggccttcctggacagcaggggacacctggagttccagggttcccaggttctaaaggtgaa atgggcgtcatgggaaccccgggacaaccaggctcgccaggaccagcaggcaccccaggc ttacctggagaaaaaggggaccatggccttccgggctcctcaggacccaggggcgaccct ggcttcaaaggtgataaaggtgacgttgggcttcctggcatgccaggatccatggagcat gtggacatggggagcatgaagggacagaaaggagaccagggagagaaaggacaaatcgga cccactggtgataaaggttcccgaggagaccctggaacgccaggagtacctgggaaggat gggcaggcagggcatcccggacagccagggcctaaaggtgacccaggccttagtgggaca ccaggatcccctggactccctggacccaaaggatcagttggaggaatgggcttgccaggt tcgcctggagaaaaaggtgtgcctggcatccctggctcacagggtgtccctggctcacct ggagagaagggagccaaaggagagaaagggcagtcaggtctacctggcattgggattccg ggacggcctggtgacaagggagaccagggccttgcaggcttcccaggcagccccggtgag aagggagagaaaggcagtgccggaaccccagggatgccagggtccccaggcccgagaggt tttccggggaacatcggccatccaggaagcccaggcctgcctggagagaaaggggataaa ggcctcccaggactggatggcgttcctggtgtcaaaggagaagcaggtctccctgggact cctggccccacaggcccagctggtcagaagggagagcccggcagcgatggaatcccgggg tcggcaggagagaagggtgaaccaggtactccaggaaaaggcttacccggcttcccaggc tccaaaggagacaaaggctccaagggtgaagtgggcttccctggcctagcaggaagtcct ggaattcctggagtcaaaggcgagcaagggttcatgggtcctcccggccctcaaggacaa cctggcttacctggcactcctggtcaccctgtggaggggcccaaaggagaccgaggacct cagggtcaacctggcctgccagggcatccgggacctatggggccgccagggttcccagga atcaatgggccaaaaggtgacaagggaaatcaaggttggccaggagctccggggattcca ggccctaagggagacccgggattccaaggcatgccgggcattggcggctctccagggatc acaggttcaaagggagatatgggactgcccggagttccaggatttcaaggtcagaaaggc cttcctggtctgcagggagtgaagggagatcagggagaccaaggtgtacccggccctaaa ggtctccaaggtccccctgggcccccaggtccctacgatgtcatcaaaggagaaccaggg ctccctggtcctgagggtccccctggtcttaaaggactccagggaccaccaggtccaaaa ggacagcaaggtgtgacaggctcagtgggcttgcctggacctccaggtgtccctgggttc gatggtgcccctggccagaaaggagagacaggaccctttggaccacctggtccaagaggg tttcctggcccaccaggccccgatgggctgccaggatccatgggtcccccaggtacccca tctgtggaccatggcttccttgtcaccaggcatagtcagacaacagatgacccactgtgt cccccagggaccaaaattctttaccatggatactctctgctctacgtccaaggcaacgag cgtgcccatgggcaggacttgggtacggctggcagctgcctgcgcaagttcagcacaatg ccttttctcttctgcaacatcaacaacgtctgcaacttcgcctccaggaacgactactcc tactggctgtccacgccagagcccatgcccatgtccatggcacccatctctggggacaac atccggcccttcattagcaggtgtgcggtttgcgaagcgccggccatggtgatggcggta cacagtcagaccattcagattccgcagtgccccaacggttggtcctcactgtggatcggc tactccttcgtgatgcacaccagcgctggtgctgaaggttccggccaagccctcgcatcc cccgggtcctgtctggaagagtttagaagcgccccattcatcgagtgccacggcagagga acgtgcaattactacgcaaatgcttacagcttttggctcgccaccatagagagaagcgag atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc cgctgccaagtgtgcatgagaagaacataa

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