Mus caroli (Ryukyu mouse): 110305805
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Entry
110305805 CDS
T05910
Symbol
Otx1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110305805 (Otx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110305805 (Otx1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
110305805 (Otx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
110305805
NCBI-ProteinID:
XP_021033584
Ensembl:
MGP_CAROLIEiJ_G0016126
UniProt:
A0A6P5QR29
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Position
11:complement(17862992..17869872)
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AA seq
356 aa
AA seq
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MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGNGTKTRPVKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASSIWSPA
SISPGSAPTSVSVPEPLAAPSNASCMQRSVAAGAATAAASYPMSYGQGGSYGQGYPGPSS
SYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPAAAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagctggccct
gccatggacctcctgcacccctccgtgggctaccctgccaccccgcggaagcagcgacgg
gagcgcaccaccttcacgcgctcacagctggacgtgctcgaggcgctgttcgcaaagact
cgctacccagacatcttcatgcgcgaggaggtggcactcaagatcaacctgccagagtcc
agagtccaggtttggttcaagaaccgccgtgccaagtgccgccagcagcagcagagcggg
aatggaacgaaaacccggccagtcaagaagaagtcgtctccagtacgcgagagctcgggt
tcagagagcagcggccagttcacgccgcccgccgtatctagctctgcttcttcgtctagc
tcagcgtccagtgcctccgccaaccccgcggctgctgcggccgcgggcctgggtgggaac
ccggtggcagcagcgtcctctctgagcacgcctactgcttcgtccatctggagcccggcc
tccatctcgccaggctcagcgccgacatccgtatcggtgccagagccactggccgctccg
agcaacgcctcatgcatgcagcgctcggtagccgcaggtgcggccactgccgcagcctcc
taccctatgtcctatggccagggcggaagctatggtcagggataccccgggccctcctct
tcttactttggcggtgtagactgcagctcctacctagcgcccatgcactctcatcaccac
ccgcaccagcttagccccatggcaccctcctccatggctggccatcaccaccaccaccct
cacgcgcaccacccactgagccaatcttcaggccaccaccaccaccatcaccaccaccac
caccaccaaggttatggaggctctgggctcgccttcaattctgccgattgcttggattac
aaggagcccgccgccgccgccgctgcttcctctgcctggaaactcaatttcaactctccc
gactgtctggactataaggaccaagcctcgtggcggttccaggtcttgtga
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