Macaca mulatta (rhesus monkey): 574201
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Entry
574201 CDS
T01028
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mcc
Macaca mulatta (rhesus monkey)
Pathway
mcc04151
PI3K-Akt signaling pathway
mcc04510
Focal adhesion
mcc04512
ECM-receptor interaction
mcc04611
Platelet activation
mcc04820
Cytoskeleton in muscle cells
mcc04926
Relaxin signaling pathway
mcc04933
AGE-RAGE signaling pathway in diabetic complications
mcc04974
Protein digestion and absorption
mcc05146
Amoebiasis
mcc05165
Human papillomavirus infection
mcc05205
Proteoglycans in cancer
mcc05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mcc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
574201 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
574201 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
574201 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
574201 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
574201 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
574201 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
574201 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
574201 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
574201 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
574201 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
574201 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
574201 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcc00536
]
574201 (COL1A1)
Glycosaminoglycan binding proteins [BR:
mcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
574201 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
574201
NCBI-ProteinID:
XP_014974803
LinkDB
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Position
16:46588741..46606662
Genome browser
AA seq
1498 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEVISCPRLLS
LRRPCLLTVLPSLTWPLVSSSPIPQGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGP
PGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPG
EPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKG
HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG
ATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAG
NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG
AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG
PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG
PPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAG
PAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERG
VQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRG
DAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAGPTGARGAPGDRGEPG
PPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARG
SAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG
PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG
PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGPKGDRGETGPAGPPG
APGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRG
IKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGTPGKDGLNGLPGPIGPPG
PRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRD
RDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDA
IKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDKRHVWFGESMTDGFQFEYGGEGSDPA
DVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRF
TYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEFGFDVGPVCFL
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac
tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagaa
tcacccaccgaccaagaaaccaccggcgtcgaggtaatctcctgccctcgacttttgtcc
ctccgccgcccgtgcctcctcacggtcctcccttctctaacctggcctcttgtttcttct
tccccaatcccacagggacccaagggagacactggcccccgaggcccaaggggacccgca
ggcccccctggccgagatggcatccctggacagcctggacttcccggaccccccggaccc
cccggacctcccggaccccctggcctcggaggaaacttcgctccccagttgtcttatggc
tatgatgagaaatcaaccggaggaatttctgtgcctggtcccatgggtccctctggtccc
cgtggtctccctggcccccctggtgcacctggtcctcaaggcttccaaggtccccctggt
gagcctggcgagcctggagcttcaggtcccatgggtccccgaggtccccctggcccccct
ggaaagaacggagatgatggggaagctggaaaacctggtcgtcctggtgagcgtgggcct
cctgggcctcagggtgctcgaggattgcccggaacagctggcctccctggaatgaaggga
cacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaag
ggtgagcctggcagccctggtgaaaatggagctcctggtcagatgggcccccgtggtctg
cctggtgagagaggtcgccctggagcccctggccctgctggtgctcgcggaaatgatggt
gctactggtgctgccggaccccctggtcctactggccccgctggtcctcctggcttccct
ggtgctgttggtgctaagggcgaagctggtccccaaggtccccgaggctctgaaggtccc
cagggtgtgcgtggtgagcctggcccccctggccctgctggtgctgctggccctgctgga
aaccctggtgctgatggacagcctggcgctaaaggtgccaatggtgctcctggtattgct
ggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccggcggccct
cccggtcccaagggtaacagcggtgaacctggtgctcctggcagcaaaggagacactggt
gctaagggagaacccggccccgttggtgttcaaggacctcctggccctgctggagaggaa
ggaaagcgaggagctcgaggtgaacccggacccactggcctgcccggaccccctggcgag
cgtggtggacctggtagccgtggtttccctggtgcagatggtgttgctggtcccaagggt
cccgctggtgaacgtggttctcctggccctgctggccccaaaggatctcctggtgaagct
ggtcgtcctggtgaagctggtctgcctggtgccaagggtctgactggaagccctggcagc
cctggtcctgatggcaaaactggcccccctggtcccgccggtcaagatggtcgccccgga
cccccaggcccccctggtgcccgtggtcaggctggtgtgatgggattccctggacctaaa
ggtgctgctggagagcccggcaaggctggagagcgaggtgttcccggaccccctggcgct
gtcggtcctgctggcaaagatggagaggctggagctcagggaccccctggccctgctggt
cccgctggcgagagaggtgaacaaggccctgctggctcccccggcttccagggtctccct
ggccccgctggtcctcccggtgaagcaggcaaacctggtgaacagggtgttcctggagac
cttggtgcccccggcccctctggagcaagaggcgagagaggattccctggcgagcgtggt
gtgcaaggtccccctggtcctgctggtccccgaggggccaatggtgctcccggcaatgat
ggtgctaagggtgatgctggtgcccctggagctcccggtagccagggcgcccctggcctt
cagggaatgcctggtgaacgtggtgcagctggtcttccagggcctaagggtgacagaggt
gatgctggtcccaaaggtgctgatggctctcctggcaaagatggcgtccgtggtctgact
ggccccattggtcctcctggtcctgctggtgcccctggtgacaagggtgaaactggtccc
agcggccctgctggtcccactggagctcgtggtgcccccggagaccgtggtgagcctggt
ccccccggccctgctggcttcgctggcccccctggtgctgatggccaacccggtgctaaa
ggcgaacctggtgatgctggtgctaaaggcgatgctggtccccctggccctgccggaccc
gctggaccccctggccccattggtaatgttggtgctcctggacccaaaggtgctcgtggc
agcgctggtccccctggtgctactggtttccctggtgctgctggccgagtcggtcctcct
ggcccctctggaaatgctggaccccctggccctcctggtcctgctggcaaagaaggtggc
aaaggtccccgtggtgagactggccctgctggacgtcctggtgaagttggtccccctggt
ccccctggccccgctggcgagaaaggatcccctggtgctgatgggcctgctggtgctccc
ggtactcccgggcctcaaggtattgctggacagcgtggtgtggtcggcctgcctggtcag
agaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaaggt
ccctctggagcaagtggtgaacgtggtccccctggtcccatgggcccccctggattggcc
ggaccccctggtgaatctggacgtgagggagctcctggtgccgaaggttcccctggacga
gatggttctcctggccccaagggtgaccgtggtgagactggccccgctggacctcctggt
gctcctggtgctcctggtgcccctggccccgttggccctgctggcaagagtggtgatcgt
ggtgagactggtcctgccggtcctgctggtcctgtcggccctgttggcgcccgtggcccc
gctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacaaggcgacagaggc
ataaagggtcaccgtggcttctctggcctccagggtccccctggccctcctggctctcct
ggcgaacaaggtccctctggagcctctggtcctgctggtccccgaggtccccctggctct
gctggtactcctggcaaagatggactcaacggcctccctggccccattgggccccctggt
cctcgcggtcgcactggtgatgctggtcctgttggtccccctggccctcctggccctccc
ggtccccctggtcctcccagcggtggtttcgacttcagcttcctgccccagccacctcaa
gagaaggctcacgatggcggccgctactaccgggctgatgatgccaatgtggttcgtgac
cgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccgg
agccccgagggcagccgcaagaaccccgcccgcacctgccgcgacctcaagatgtgccac
tctgactggaagagcggagagtactggattgaccccaaccaaggctgcaacctggatgcc
atcaaagtcttctgcaacatggagactggtgagacctgcgtgtaccccactcagcccagt
gtggcccagaagaactggtacatcagcaagaaccccaaggacaagaggcacgtctggttc
ggcgagagcatgaccgacggattccagttcgagtatggcggcgagggctccgaccctgcc
gacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacatc
acctaccactgcaagaacagcgtggcctacatggaccagcagactggcaacctcaagaag
gcactgctcctccagggctccaacgagatcgagatccgcgccgagggcaacagtcgcttc
acctacagcgtcactgtcgatggctgcacgagtcacaccggagcctggggcaagacagtg
atcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttggac
gttggtgccccagaccaggaattcggcttcgacgttggccctgtctgcttcctgtaa
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