Mugil cephalus (flathead mullet): 125003510
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Entry
125003510 CDS
T08342
Symbol
tnrc6c2
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125003510 (tnrc6c2)
03036 Chromosome and associated proteins [BR:
mcep03036
]
125003510 (tnrc6c2)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125003510 (tnrc6c2)
Chromosome and associated proteins [BR:
mcep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125003510 (tnrc6c2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA
RRM_1
Ago_hook
RRM_occluded
Mei5_like
THOC7
Motif
Other DBs
NCBI-GeneID:
125003510
NCBI-ProteinID:
XP_047433438
EnsemblRapid:
ENSMGCG00000026598
LinkDB
All DBs
Position
2:complement(1928446..1976713)
Genome browser
AA seq
1938 aa
AA seq
DB search
MEEKKKKKQEDKTKKREDIAQKKAADQKPKVPEPAPTKPSPGPSHHLHPASPTLSLSSSS
SGNGKRASSSSQLATQTPPQQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLPAGA
LSALTISSSSSSYSSPSSSYSSSSTSTSSTTPNSATSTADKHHQDISNQSGPGAQYETSH
WGASVPVDSPSSANSWDKVIIDRSDTEAWPSISCSSDPSHPALPECPLGSASSNIDTSAV
TTSRSSFLSMATGAAGQQAHYPSLKANNNMMTGPGSTSTLTSNRGWGSEGKQDGMNGGRV
GAPNNWGSPNFNLNLNPNANPSAWPVLGHEGGGGSGIGPSGVSNSSSLPPGINGNGNMGN
SSLGGADNVGGGWVGMISANENDQQHPSTNANLSFNLESANLKTDGPNHTKPQQQAQEPM
SPIHGLTGWGGQSPTESSQLNGDTTGSSVWGSGETKAADSPKDSGWDSTPSGGLSAWGRQ
GSGGGSSGSGGWGDWGKSSGGGDASKGWDSVDAGSSGSGQEQQISSWGQQPGTAPASEDS
GDSSEGRSHRRDRSSSVEFAPALPRQDLDPRVLSNTGWGQTPIRQHTVWEMEEANSDDGK
SNSSSDTIGGTSSNGGPSSSNGSIINPNIGPSRRPGSGGKSDNEGPSSSSWGAPPPQQVQ
TGSGWGDTQQSLSKAPNGTTSGWGDPLPASGPKSGSTPSWASEDKSPSWDDGMMKNQPTS
WGEGPKSSHGWGNSNGGSNGCSTGDWGEPDAKNNVSSSNMWEGEGGNGGNGGNGGWKESP
RGGNRGGGGGGGGGWGKPAPAVNNSSWGETSRANGPMQGGWGSSKPQESSSSSTGSGGGG
SNCPWGGPGSVKQNSSSWGNVSKQDQGMEPTGWEEPSPPSIRRKMEIDDGTSTWGDPSAY
NKTVNMWDRNNPNGNTGNNGPPPTKNGGMIVPNNNNNNHSVGPGTNNHHHPHHMHHHPHH
GQPPNHLQHHGNNNGSPNIAASHPSAGPQGRPPLANPGWGELPSVQPKSEPAWGEPAAPT
SAVDNGTSAWGKPQGGVGGWGDGGHEPSAPYGRANGPPGSAPCKPVSKPMQDGWGSAPEE
MGMSTSQWDTEDGDVWNSPTSQESSSSCNSWGNGPKKCPSKGKMSNKPDEAWIMNRLIKQ
LTDMGFPRDPAEEALKSNNMNLDQAMTALLEKKTDLDKRGMGLSDYSNGMNKPLVCRPSA
LSKDPSDRATFLDKDGVLSDDAPPSPFLPSPSLKLSLANSSLPGQGLGQGNPGLAMQNLN
NRQIPSGMFGSSGAAQTRAMQQQPPQPPVPPLSSSQPSLRAQVPQFLSPQVQAQLLQFAA
KNIGLNPALLTSPINPQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVA
RTITNMQQQIQQHQRQLYQALLMKQQQLPSHSSSSSSSTGLHPPGGPTGGPGSGKSTMDP
FAGPHQASGLADTLHTKEPPSSPNAYTTYSLSGLNPNMNVNCMEVGGLSLKEPPQPQSRL
SQWTHSNSMDNLSGNSSNLENNLNKHGAISAASTLVPPGKPPQLEDSYSPYNLISNAESP
TSPLVAPDSWGQGKSPNEKISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSG
PTINTNIHDVNRYLLRDRNGATSPDSPLQNGSLPPSSSDWPVSGYSSSFSLSSCDGDSSG
KLSDMKSTWSQGPISQSQASLSHELWKVPQGPRSTTAPSRPPPGLTNPKPSSTWGGNSLG
LAQGWSGSYSSEGTTWSTDSSNRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLITFHLNLT
QGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGANTTSWQA
NPGNNQNRMGGATQSHSIGQWSSGTGGGKASGGDLLWGGVPQYSSLWGPPSGEDARVIGS
PTPINTLLPGDLLSGESM
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaaacaagaagacaagaccaagaagagagaagacatcgct
cagaaaaaggctgccgatcagaaacccaaagtgccagagcctgctcccactaagcccagt
cccggcccatcccaccacctccaccctgccagccccacgctgtccctctcctcttcctct
tctggcaatggcaagcgtgcttccagcagtagccagctcgcgactcagactccccctcag
cagcagtgccagttgtcctctgccagtgctcgctacccgcccagagaggtgcccccacgc
ttccgtcagcaggagcacaaacagctactgaagagaggccagccactgcctgcaggagcc
ctcagtgctctcactatctcctcttcctcttcctcctactcttcaccctcatcatcttac
tcttcttcttctacaagtaccagcagcactaccccaaactctgccacgtccactgcagac
aaacaccaccaagacatatccaaccagagcggccctggtgcccagtatgagacctctcat
tggggggcctctgtaccagtcgacagcccctccagtgccaacagctgggacaaagtgatt
attgacagaagtgacacagaagcttggccctccatcagctgcagtagtgaccccagccac
cctgcattaccagaatgccccttgggctcagctagctcaaacatagacaccagtgctgtc
actaccagtaggagtagttttctgagtatggccacaggtgccgccggccagcaggcccac
tacccatctcttaaagctaacaataatatgatgacaggacctgggtcaaccagcacatta
acgagtaatagaggctggggctcagaagggaaacaagatggtatgaatggtgggcgagtt
ggagcgcccaataactggggttctcccaattttaacttgaacctcaaccccaatgccaac
ccttcagcatggcccgttcttggccacgagggtggaggaggcagcggtattggccccagc
ggggtgtccaactcttcatccctcccgccaggtataaatggcaatggaaacatgggaaat
agtagcctgggaggtgctgataatgttgggggaggttgggttggcatgataagtgctaac
gaaaatgatcaacagcacccttcaaccaacgcaaacttgtccttcaatctggaatctgca
aacctcaagactgatggaccaaaccacactaaaccacagcaacaagctcaggagcctatg
agccctatccatggtttaactggctggggaggccagtcacccactgaatcatcccaactc
aatggggacaccacaggcagctcagtatggggtagtggagagaccaaggcagctgattcc
cccaaggactcaggctgggactcaactccctctggaggtctttctgcctggggtcgccaa
ggcagtggtggtgggagtagtggaagtggtggctggggtgactgggggaaatcctccggt
ggtggagatgcatctaaaggctgggactcagtagatgctggtagttctggctctggtcaa
gagcagcagattagctcatggggccaacagcctggaactgccccagcaagtgaggatagt
ggggacagcagtgaaggtcgatcccatcgcagagacaggtcctcaagtgttgagtttgcc
cctgcgctaccccggcaggacctggatcccagagtgttaagtaacaccggttggggacag
acccccatccgacagcatactgtatgggagatggaagaagccaactctgacgatggaaag
agcaatagtagctcagacactataggaggcaccagctctaatggtggaccctcgtcaagc
aatggaagtatcatcaaccctaatattggtcccagtcgaaggcctgggtctggaggaaaa
agtgacaatgaaggaccatcatcttctagctggggagctcctccacctcagcaagtccag
actggatcagggtggggtgacactcaacagtccctcagcaaagcaccgaatggcactacc
agtggctggggtgatcctttgcctgccagtggtcctaaaagtggcagcacaccatcctgg
gcttctgaagacaaatcacccagctgggatgatggcatgatgaaaaaccagcctactagt
tggggagagggccccaaaagttcccatggttgggggaacagtaatgggggttctaatggc
tgcagcacaggagactggggagagccagatgccaaaaacaatgtgtcctccagcaacatg
tgggaaggggaaggaggtaatggaggaaatggtggaaatggtggatggaaggaaagccca
agaggaggaaatagaggaggaggaggaggaggaggaggaggctggggcaaacctgctcct
gctgtgaataatagcagttggggggagacttcacgtgccaatggccctatgcagggaggc
tggggctcttccaagccacaggaaagcagcagcagcagcactggcagtggaggaggtggc
agcaattgtccttggggtggtccaggttctgtgaagcagaacagctcgagctggggaaat
gtcagcaaacaggaccagggtatggagcctactggctgggaagaaccctctcctccctcc
atccgcaggaagatggagattgatgatggaacatccacctggggtgatcccagtgcctac
aacaagactgtcaacatgtgggatcgtaacaatcccaatggtaacacaggcaacaatggc
ccacctcctactaagaatggtggaatgattgtgcccaacaataacaacaacaatcactct
gttggccctggcaccaacaatcaccatcaccctcaccacatgcatcaccatccccaccat
ggccagcccccgaatcacctgcaacaccatggaaacaacaatgggtcaccgaacattgct
gcctcacatccaagtgcaggcccccagggtagacctcccctcgctaacccaggttgggga
gagcttcctagtgttcagcccaagtcagagcctgcttggggagagccagcagctccaact
tcagctgtggacaatggtacctcggcctggggcaagccccaaggtggggttggaggatgg
ggagatggtggccatgagccctctgccccctatggcagagccaatggacccccaggttct
gcaccttgcaagccagtctccaaacctatgcaagatggctggggaagtgcaccagaggag
atgggcatgtctaccagccaatgggacactgaggatggggatgtatggaacagccctacc
tcccaggagagcagctcttcttgtaactcttggggcaatggccccaagaagtgcccaagc
aagggaaagatgagtaacaagccagacgaggcctggatcatgaaccgcctcatcaaacaa
ctcactgacatgggctttccgagagaccctgctgaggaggcattgaagagcaacaatatg
aaccttgaccaggccatgactgccctgttagagaagaagacagacttggacaagcggggc
atgggcttatctgattacagcaatggcatgaataagcctcttgtatgtcggccctctgca
ctctccaaagacccctccgaccgcgccacctttctggacaaggatggtgtcctgtcagat
gatgcccccccatcaccatttttgccttcccccagcctgaagctctccctggccaacagt
agccttcctgggcagggtctgggacagggcaacccggggctggccatgcaaaacttgaac
aacagacagatacccagtggaatgtttggcagtagtggagcagcacaaacccgggccatg
cagcagcagcctcctcagccaccagtgccacctctcagctcctcccagcctagtctacgt
gctcaagtgcctcaatttctctcccctcaggtccaagcacagctcttgcagtttgcagca
aaaaacattggtctgaaccctgcacttttaacctcaccaataaaccctcaacaaatgacc
ctgttgtaccaacttcagcaactgcaaatggcgtaccagcgtttacaaatccagcagcag
atgatgcaggcgcaacgcaatgtttctggccccattagacaacaagagcagcaagttgca
cgtacaatcaccaacatgcagcagcagatccagcagcaccagcgtcagttgtaccaggcg
ctgctgatgaagcagcagcaacttccctctcattcctcctcttcctcttcctccactggt
ctgcatcctcctggtggccctactggaggccctggctccggaaaatcaaccatggaccct
tttgcaggcccacaccaggcttcaggcctcgccgacacactgcacaccaaagagccaccg
tcttctcccaacgcctacaccacctactctctctctggactgaatccaaacatgaatgta
aactgcatggaggtggggggtctgtccctgaaggaaccccctcagccccagtcccgcttg
tcccaatggacacactccaactccatggacaacctctccggcaactcttcaaatttggag
aacaacctcaataagcacggtgccatatctgctgcctctaccctggtcccccctgggaag
cccccccagctggaggactcatacagcccttacaatctaatctccaatgctgagtccccc
accagccccctagtagcccctgacagctggggccagggcaagagccccaatgaaaagatc
tccaatgggaccaatattaactggcccccagagttctgcccaggggtgccatggaagggc
cttcagaacattgaccctgagaatgaccccaatatgactcctggcagtgtccccagcggc
cccactatcaacaccaacatccacgatgtcaatcggtacctgctgcgagataggaatgga
gccacttctccagactctccacttcagaatggctctctgcctccaagcagcagtgactgg
ccagtcagtggttactctagctctttcagtctgtcatcctgtgatggagacagctcaggt
aaactgtctgacatgaaatccacctggtcccaagggcccatctctcagagccaagcgtct
ctgtcccatgagttgtggaaagtccctcagggtccgcgcagcaccacggccccatcaagg
cctcctccaggcctcacaaacccaaagccctcctccacctggggtggcaactcattgggt
ctggcccaaggctggagcggttcctattcttctgagggaaccacatggagtactgacagc
tccaatcggaccagcagctggctggtgctgaggaatctcaccccacaaattgatggttca
actctgcggaccctgtgcatgcagcatggccccctgatcacattccatcttaacctgacc
caggggaatgctgtggtgcgctacagctctaaggatgaagctgcgaaggctcaaaaatcc
ctgcacatgtgtgtgctgggaaacaccacaatcctggcagagtttgctggtgaggaggag
gtgaaccgcttctttgcacaaggccagtcgttgggggcaaacaccacgagctggcaggcc
aacccgggaaacaatcaaaaccggatgggcggggcaacgcagtcccactcaattggccag
tggagcagcggtactggtggaggcaaggccagcggaggagacctgctgtggggcggagtg
ccccagtactccagcctgtgggggccgcctagtggagaggacgcccgtgtgatcgggagc
cccactcccattaacaccctgctgcctggagatctgctgagtggggagtccatgtag
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integrated database retrieval system
