Mugil cephalus (flathead mullet): 125006270
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Entry
125006270 CDS
T08342
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125006270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125006270
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125006270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP43_N
RRM_1
RRM_7
RRM_3
OB_RNB
Motif
Other DBs
NCBI-GeneID:
125006270
NCBI-ProteinID:
XP_047438137
EnsemblRapid:
ENSMGCG00000007907
LinkDB
All DBs
Position
4:complement(6906287..6911413)
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AA seq
405 aa
AA seq
DB search
MAEVYIRVAEEENEEPMEIPSEDDGTVLLSTVAAQFPGACGLRFRSPVSQCMRGVRLVEG
VLHAPENGWGNVVYVVNYPKDNKRKMDETDASSAVKMKRGDMKTSDLIVLGLPWKTTEQD
LKDYFSTFGEVIMVQVKRDAKTGNSKGFGFVRFTEYESQEKVISQRHMIDGRWCDCKLPN
SKVNMQGPDEPLRSRKVFVGRCTEDMTTDDLRQFFMQYGEVTDVFIPKPFRAFAFVTFAD
DQVAQSLCGEDLIIKGVSVHISNAEPKHGNRQFDRTARFGNGFGAQAFGSSRSGLGSSTN
SSLANFGSFSLNPAMMAAAQAALQSSWGMMGMLASQQQTSTSGSTSSGTSSSRDQSQSFS
TGNSNYGTSSASLGWGTGSNSTTGGSGFSSGFGSSMESKSSGWGM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagtgtacattcgagtggcagaagaggaaaatgaagaacccatggaaatccca
tcggaggatgacggcacagtcctgctttcaaccgtggcagctcagtttccaggggcgtgc
ggcctacggttcaggagtcccgtgtctcagtgcatgcgaggagtgcgtctggtggaaggg
gtcctccacgctccggaaaacggatggggcaatgtcgtgtacgtggtgaactacccaaaa
gacaacaaaagaaaaatggatgaaaccgatgcctcctctgctgtgaagatgaagcgagga
gatatgaagacatctgacctgatcgtcctgggtcttccttggaaaacaacagaacaggac
ctgaaagactacttcagcacatttggagaagtcatcatggttcaggtaaaacgagatgct
aagactggaaactctaaaggatttggctttgtgaggttcacagaatatgagtctcaagaa
aaggtgatctcccagcgccatatgatcgatggaagatggtgtgactgcaagctccctaac
tcgaaggtgaatatgcaaggtccagacgaaccactgaggagccggaaggtgtttgttgga
cgttgcacagaagacatgaccacagatgacctacgtcagttctttatgcagtatggagaa
gtcacagatgtcttcatccctaaaccattccgtgcatttgcctttgtcacatttgctgat
gatcaggttgcccaatctctctgtggagaggaccttattatcaaaggagtcagcgttcac
atctcaaatgctgagccaaagcacggcaataggcagtttgatcgtacagcccggtttgga
aatggctttggagctcaagcatttggtagcagccgtagtgggttagggagcagcaccaac
agtagtctggcaaattttggttccttcagtctgaaccctgccatgatggctgctgcgcag
gctgctctgcagagtagttgggggatgatgggtatgctcgctagccagcagcagacctcc
acctcaggcagcacttccagtggaacaagctctagtagagaccagagtcagtctttcagt
acaggaaacagcaattacggcaccagctcagccagcctcggctggggaacagggtcaaac
tctacaaccggcggtagtgggtttagctcaggttttgggtccagcatggagtcaaagtca
tctgggtggggtatgtaa
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