Mugil cephalus (flathead mullet): 125008119
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Entry
125008119 CDS
T08342
Symbol
nxf1a
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
mcep
Mugil cephalus (flathead mullet)
Pathway
mcep03008
Ribosome biogenesis in eukaryotes
mcep03013
Nucleocytoplasmic transport
mcep03015
mRNA surveillance pathway
mcep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125008119 (nxf1a)
03015 mRNA surveillance pathway
125008119 (nxf1a)
03008 Ribosome biogenesis in eukaryotes
125008119 (nxf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125008119 (nxf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125008119 (nxf1a)
03009 Ribosome biogenesis [BR:
mcep03009
]
125008119 (nxf1a)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125008119 (nxf1a)
mRNA cycle factors
Stress granule specific factors
125008119 (nxf1a)
Ribosome biogenesis [BR:
mcep03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125008119 (nxf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
125008119
NCBI-ProteinID:
XP_047441150
EnsemblRapid:
ENSMGCG00000004290
LinkDB
All DBs
Position
5:complement(9692241..9705308)
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AA seq
673 aa
AA seq
DB search
MTRVVLFRERYPNLSVTRVVNDDNGDLIVRREVVSTDPIVQGEHDDRTAPQRNRKGRGSY
KGRSYDRSRRDRQRGSHSGGFGGPGPRSRLEDTDGDVAMSDSPQDNSSQNRFTPYGRPFR
KGEGRFDRDRRQGKGGGGGRGGGGGGGGGGFRGGDRGGGGGIGGGKNRSGWYKVTIPHGR
KYDKKWLLTALQNICSVPYTPVQYHVDHSRVHFYVDDSAAASALHKCSHKITDTDGYKVE
VHVNNSAPPSFLLSDLKPEHLEHLKQCMAKRFDGSQQALDLNNIRTDPDLVSQNIEVILN
RKTNMEAVLKIIEENIPELTCLNLSNNRIHKLDELTELVTKVPNLKTLNLSHNELKSDRE
LDKVKGLKLVELWLNRNPLCDLFKDQTSYISAVRERFPRLLKLDGYDLPPPIGFDVETPT
TIPPCKGSCFGSDEIKAHILRFLQQYYSIYDSGDRQPLLDAYHDGASLSLTTPYSTQNPS
RSSLGEYHKDSRNLKRIKDTTIRYRLLKHTRLNVVAFLNELPKTQHDIASFTVDVNTCTN
TLLSFTVSGVFKEVVVDGKSRESTMAFSRVFVTVPAGNSGLCIVNDQLFIRMATTEEIRR
AFVAPAPTPSSSPVPTLTAPQQEMLTAFSVKSGMNLEWSQKCLQDNEWDFNRAAQIFTQL
KTEGKIPDVAFIK
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtgtggttttgtttcgggaacgttaccccaacctgtctgtgacacgtgtggtc
aacgacgacaacggggacttaattgtgaggagagaggtcgtaagcactgatcccattgtc
caaggagagcacgatgacagaactgcacctcagcgcaaccgcaaaggcaggggctcctac
aagggtcggtcgtatgacagatcacgcagagaccgtcagcgagggagccactctggaggg
tttggaggccccggaccacgatcgaggctcgaagacacagatggagatgtggctatgagt
gacagcccgcaggacaacagctctcagaacagattcaccccatatggaagaccctttcgg
aaaggagaaggacggtttgacagagacaggcgacaaggcaaagggggaggaggtggtaga
ggtggaggaggaggaggaggaggtggtggcttcagaggaggagaccggggtggaggaggt
ggcattggaggagggaaaaaccgatcgggatggtacaaagtgacgataccacacggaaga
aagtatgacaagaaatggttattgacagctctccaaaacatatgttcagttccctacaca
cctgtacagtaccacgttgaccatagcagggtccatttctatgtggatgattcagctgcc
gccagtgctttgcacaaatgttctcacaagatcacagacacagatggttataaggttgaa
gtgcatgtcaacaacagtgctccaccatccttcctcctgtcagacctgaagcctgaacac
ttggagcacctgaagcaatgcatggcaaaacgttttgacggctcccagcaagcactggac
ttgaacaacatccgaacagacccagacctggtgtcccaaaacattgaagtgatcttgaat
aggaagacaaacatggaagctgtcctcaaaatcattgaagaaaacattcctgagcttacc
tgcttgaacctgagtaacaaccgcatccacaaactggatgaactcactgaattggttacc
aaagtgcctaatctgaagactctcaacctttcccacaacgagctgaagtcagaccgggag
ctggacaaggtgaaaggtctgaagctggtggagctgtggctgaacaggaaccctctgtgt
gacctcttcaaggaccagacctcatacatcagtgccgtgcgggagaggtttccccggctt
ctcaaactggatggttatgatctccctccgcccattggattcgacgtggaaacgccgacc
actatcccgccatgcaagggcagctgttttggctctgatgaaatcaaggctcacatcctt
cggttcttgcaacagtactacagtatatatgactctggggacaggcagcccctcctggat
gcctaccatgacggagcctcgttatccctcacaacaccgtactccacccagaacccctcc
aggagcagtctgggagagtatcacaaagacagtcgaaacttgaagaggatcaaagacacc
acgatacggtatcgactgctgaaacacacgcgcctgaatgtggtggctttcctcaacgag
ctgccgaaaactcagcacgacatcgcctcctttacagttgacgtaaacacgtgcacgaac
acactactgtcattcacagtgagcggagtctttaaagaagttgttgttgatggtaaatcc
agagaatccacaatggccttctcgagagtctttgttacagtcccggcaggaaattctggt
ttgtgcatcgtcaacgaccagcttttcatccgaatggccacaacagaagagatccgcaga
gcttttgtggctcccgccccgaccccatcctccagtcccgtcccgaccctcactgcacca
cagcaagagatgctcacggccttctcagtgaagtcaggcatgaacctggaatggtcgcaa
aagtgtctgcaagataatgagtgggacttcaacagagcagcacagatcttcactcagttg
aagactgaaggcaagatccctgatgttgcgttcataaaatga
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