Mugil cephalus (flathead mullet): 125019887
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Entry
125019887 CDS
T08342
Name
(RefSeq) collagen alpha-1(XIV) chain
KO
K08133
collagen type XIV alpha
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcep00535
]
125019887
Proteoglycans [BR:
mcep00535
]
Extracellular matrix (ECM) proteoglycans
Others
125019887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
DUF4959
T2SSJ
Motif
Other DBs
NCBI-GeneID:
125019887
NCBI-ProteinID:
XP_047460878
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All DBs
Position
14:complement(24257791..24381800)
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AA seq
1873 aa
AA seq
DB search
MQVPVKMSLFLLSFALISVFPETARGQVATPRRFRANVLSPKKLEVSWKEPKGEFESYKV
IYTTRPGGEQKVVPVSKQDAKLIIEDFDSSKEYRFKIFALGGGKESKPLQAKHEAQQSGS
EMTQPQTRPSGAKSENNEISEAEEGFMCKTPAVADIVILVDGSWSIGRINFRLVRTFLEN
LVRSFAVEIDKTRIGLAQYSGDPRIEWHLNAHTTKAAVIDAVKNLPYKGGNTLTGLALTF
ILENSFKPESGSRAGVPKIGILITDGKSQDDVIPPAQSLKDAGIELFAIGVKNADENELK
AIASPPEETHVYNVADFNVMSDIVDGLSKTVCDRVEQLDKKIRGGGQPAPAPVPVAAPRD
LVISEITARSFRVTWTHASGQVEKYRVVYYPASGGQPEEKVVQGTENSVELNYLNSLTEY
QVAVFAIYRSSASEALRGSATTRALPMVNDLELFDITHSTMRVRWKTAAGASGYMILYAP
LTEGDAADEKEVKVEDSVNEVELEGLTPATEYTVTVYALYGEEASDPMTSQQTTLPLTPA
KNLRFLDVDHSSARLTWDSASRKVRGYRVMYVKTNGVQITEEDVGAVTSWLLRNLTSLTE
YTVGVFALYDEGQSEALTDSFTTKTVPDPMDLTSSDVSSESFRVSWRHPASDVVLYRLVW
TATDGGEDSEEILLNGNINTYIIKGLSPSTEYEILLAALYQNEVESDEVILVETTAKKTT
TIATTTTTTEAPRPGVKAMKIDEQTTFSLRVSWQPVDASNIRHYRLVYVSAKGDRAEETR
TVPTGQSSLVLQPLLSDTEYKVSITPVYPEGDGPMASQMGRTLPLSAPRNLRVSEEWYNR
FRISWDVPPSPTMGYRVVYQPISAPGPALETFVGEDVNTMLIVNLLSGTEYSVKVIASYT
TGSSDALSGKAKTLFLGVTNMNTYQVKMNSMCIQWQPHRHASSYRVAAQSVSGSQKQETK
LGGGSSRHCFNNLKPSVEYRMSVYAQLLDGTEGPAVTTTAKTLPAPTQPPPKPPTPAPVP
TIPAAKEVCKAAKADLVFLVDGSWSIGDDNFLKIIRFLYSTTGSGPAVCLQVAIAQFSDD
ARTEFKLNSYSDKERLLDAINRISYKGGNTKTGRAIQHVKQNIFTVEGGVRRGVPNVLVV
LTDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAFKK
IEEKLVTFVCEAATATCPSVPMSGSTTPGFRMMELFGLVENRYSSVSGVSMVPGTFNAFP
CFHLHSDALLAQPTRFLHPEGLPSDYTITLLFRLLPNTPEEPFAIWEILNKNNEPLVGVI
LDNGGKTLTFFNNDYKREFQTVTFEGPEIKKLFYGSFHKLHIAISKTSAKVLIDCKMVAE
KAINAAGNITTEGVEVLGRMVRSRGNKDNSAPFQLQIFDIVCSTSWANRDKCCEIPGLRK
EVDCPALPKACTCTQDSKGPPGPAGVPGGPGIRGARGDRGEPGPVGPTGPVGDTGVPGPQ
GPQGPQGPSGRSIIGPPGPPGERGQKGDPGQQGSQGVPGRPGGPGREGPPGARGLTGKDG
PAGRQGPPGPIGTPGAPGAPGNTGPQGKQGELGKTGPPGGKGEKGERGDLQSTASVQDIA
RQVCEQLIQSHMARYNNILNQQPSQPVSIRTVPGPPGEPGRQGNPGPQGEQGLPGRPGFP
GQNGQNGQPGERGQPGEKGEKGSQGVGVQGPRGPPGPPGAQGQGRPGSQGPSGRPGNPGT
PGRPGVPGPIGPAGPPGYCDQNSCVGYNVGEGEDDVTDRGTFPAVQLPSNVFQNYGEAEE
DDPYRYYQPNYPAPRPVSPDDPDIELRSPGVHRISRSLPEEKEEEVKEEKEEEEEKVGPK
RRLKRAAKIGLTN
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcccggttaagatgagtctcttcctgctgagcttcgctctcatctccgtgttc
cctgagacggcgcgaggacaagttgcgacgccgcggaggtttcgagccaacgtcctgagc
cctaagaagctggaggtgtcgtggaaagagcccaaaggagagttcgagagctacaaagtc
atttacaccacgaggccgggtggagagcagaaggtggttccagtttcaaagcaggatgca
aagctgatcattgaagactttgactcgtctaaggagtacaggtttaagatctttgcgctc
ggcggggggaaggaaagcaaacctcttcaggccaaacatgaagctcagcagtcgggttct
gaaatgactcagccccaaacgagaccgagcggcgccaagtctgagaacaacgagatctct
gaagctgaggaggggtttatgtgtaagactcccgctgtggccgacatcgtcatcctggtg
gacggctcctggagcatcggtcgcatcaacttccgtctggtcaggaccttcctggaaaac
ctggtccggtccttcgctgtggagattgacaagaccaggatcggtctggcccagtacagc
ggagacccaaggatcgagtggcatctcaacgctcacaccaccaaggccgccgtgatcgac
gccgtgaagaacctgccctataaaggaggaaacactctgacaggtctggctctgaccttc
atcctggagaacagcttcaaaccagagtctggatccagagccggcgtccccaagatagga
atcctcatcaccgatggaaagtcccaggacgacgtgatccctccagctcagagcctgaag
gacgccgggatagaactgttcgccatcggtgtgaaaaacgctgatgagaacgagctgaag
gccatcgcctcccctccggaggagacgcacgtctacaacgtggccgacttcaacgtgatg
agtgacatcgtggacggcctctccaagaccgtgtgcgaccgcgtggagcagctggacaag
aagatccgaggtggaggacaacctgctccggctccggtccccgtcgctgcccctcgggac
ctcgtgatctccgagataacggctcgaagcttccgggtgacgtggacccacgcctcaggc
caggtggagaaataccgcgtggtgtactacccggccagcggaggccagcccgaggagaag
gtggtccaggggacggagaacagcgtggagctcaactacctgaactccctgaccgagtac
caggtggccgtgttcgccatctaccgcagctccgccagcgaagccctgagagggagcgcc
accacacgggctctgccgatggtcaacgacctggagctgttcgatatcacccacagcacc
atgagggtccgctggaagaccgccgccggggcttctgggtacatgatcctgtacgcgccg
ctcaccgagggagacgccgccgacgagaaggaggtgaaggtggaggactctgtgaacgag
gtggagctggaaggactgactccagccaccgagtacacggtgacggtttacgccctgtac
ggggaggaggccagcgaccccatgaccagccagcagaccacactgccgctgactccggct
aagaacctgcgcttcttagacgtggaccacagctccgcccgcctcacatgggactccgcc
tccaggaaggtccgaggctaccgggtcatgtacgtcaagaccaacggggtccagatcacc
gaggaggacgtgggcgccgtgacgtcctggttgctaagaaacctcacctccctgacggag
tacaccgtcggcgtcttcgctctgtacgacgagggacaatccgaggccttgacggacagc
ttcaccacaaagaccgtcccagacccgatggacctgacgagcagcgacgtgtcctcggag
agcttcagggtgtcctggcgtcacccggcctctgacgtggtgctgtatcgactcgtctgg
acggccactgacggaggagaggacagcgaagagatcctgttgaatgggaatatcaacacg
tacattataaaaggcctcagcccctccaccgagtatgaaatcctcctggccgccctctac
cagaacgaggtggagagtgacgaggtcatcctggtggagaccaccgctaaaaaaacaacg
accatcgctacgaccaccacaaccacagaagctcctcgtcccggcgtgaaggccatgaag
atcgatgaacaaaccaccttcagcctgagagtgtcctggcagcccgtcgacgccagcaac
atccgacattatcgcctggtctacgtcagcgctaagggagaccgagcagaggagacgagg
acggttcccacgggtcagagcagcctggtcctccagcctctgctgtcagacaccgagtac
aaagtcagcatcacccccgtctacccagagggagacggaccgatggcctctcagatggga
cggacacttcctctttcagctcccaggaacctcagagtctcggaggaatggtacaaccgc
ttcaggatcagctgggacgtcccaccgtctcccaccatgggctacagggtcgtctaccag
cccatttctgctcctggaccggccctggagaccttcgtgggggaggacgtgaacaccatg
ctgatcgtcaacctgctgagcgggaccgagtacagcgtcaaggtgatcgcctcctacacc
accggctccagcgacgccctctcaggaaaggccaagaccctcttcctcggagtgaccaac
atgaatacgtaccaggtgaagatgaacagtatgtgcatccagtggcagccgcatcgacac
gccagctcctacagagtggccgcccagtccgtgagcgggagccagaagcaggagaccaag
ctgggaggagggagcagccgacactgtttcaacaacctgaagcccagcgtggagtacagg
atgagcgtctacgctcagctgctggacgggaccgagggcccggccgtcaccaccaccgcc
aagacacttcctgccccgacgcagccgccccccaaacccccgacccccgccccagtaccc
acaatccccgctgccaaggaagtgtgtaaagcagctaaagcagacctggtcttcctggtg
gacggttcctggagcatcggcgacgacaacttcctgaagatcatccgcttcctgtacagc
accacgggctctggacctgccgtgtgtttacaggtggctatagcccagttcagtgacgac
gcccggaccgagttcaagctgaactcatacagcgacaaggagcgactcctggacgccatc
aacaggatctcctacaaaggaggaaacacaaagacaggtcgagccatccagcacgtgaag
cagaacatcttcacggtggagggaggagtcaggaggggggtccccaacgtcctggtagtt
ctgaccgacgggcggtcgcaggacgacgtcaacaaagtttccaaggagatgcagatggaa
ggctacatcgtgtttgctattggcttcgccgatgccgactacggggagctggtgagcatc
gccagcaaacccagcgacagacacgtgttcttcgtggacgacctggatgccttcaagaag
atcgaggagaagctggtgacgttcgtgtgcgaagccgccacagccacgtgtccgtccgta
ccgatgagtggaagcacaacaccaggtttccgtatgatggagctctttgggctggtggag
aatcggtacagcagcgtctctggtgtttccatggtacccggcaccttcaacgctttcccc
tgtttccacctgcacagtgatgctctgctggctcagccaaccaggttcctccaccctgag
gggctgccctcagactacaccatcaccctgctgttcaggctgctgcccaacactcctgag
gagcccttcgccatctgggagatcctgaacaagaacaacgagccactggtgggagtcatc
ctggacaatggcggaaaaactctgacgttcttcaacaacgactacaaaagagaatttcag
acggtcacgttcgaaggaccggaaatcaagaagcttttctacggaagcttccataagctt
cacattgcaataagcaagaccagcgccaaggtgttgatcgactgcaaaatggtggcagag
aaagccatcaacgcagcaggaaacatcaccacggagggagtggaggtcctgggcaggatg
gttcggtccagagggaacaaggacaactctgcaccgttccaactccagatctttgatatc
gtctgtagcacttcctgggccaacagagacaagtgctgtgaaattcctggtctgaggaag
gaagtggactgtccggctttgcccaaagcctgcacctgcactcaggacagcaaaggcccc
cccggcccggctggagtaccaggaggcccaggaatcagaggagcccgaggtgatcgtgga
gagccaggcccggtgggtccaacaggtcccgttggtgatacaggtgtaccgggacctcag
ggaccccaaggaccacaaggacccagtggacgctctattattggacccccaggtcctcca
ggagagcgagggcagaagggggatcctggacagcaaggatcacagggagttcctgggaga
cccggaggtccaggaagagagggacctccaggagccagaggactgacaggaaaagacggc
ccagcgggccgacaggggcccccggggcctattgggactccaggagccccgggagctcca
ggaaacacaggccctcaaggaaaacagggggaactgggaaaaacgggtcctcctggaggc
aagggggagaaaggtgaacggggtgaccttcagtccacagcatcagttcaggacatcgcc
aggcaggtctgtgagcagctcatccaaagtcacatggcgcgctacaacaacatcctgaac
caacagcccagtcagccagtgtccatccgcacggtgccaggtccacctggagaaccaggt
cgacaaggaaacccaggcccccagggagaacagggactcccaggaagaccgggcttccca
ggacagaacggacagaacgggcaaccgggagaaagaggtcaaccaggagagaagggtgag
aaaggatctcaaggagttggtgtccaaggcccccgaggacccccaggacctcccggtgcc
caaggacaaggcagacccggcagccagggtccatcaggacgacctggaaaccctggaacc
cccggtcgacccggggtccctggacccatcggccctgcaggacctccgggttactgtgac
cagaactcctgtgtgggctacaatgttggagaaggcgaagacgacgtcactgaccgtggc
actttccctgcagtccaactgccgtccaacgtcttccagaactacggcgaggcggaggag
gacgacccgtaccgctactaccagcccaactacccggccccccggcccgtgtcgcccgac
gaccccgacatcgagctgaggtcccccggcgtccaccgcatctcccggagcctaccggag
gagaaggaggaggaggtgaaggaggagaaggaggaggaggaggagaaagttgggccgaag
aggaggctaaagagagcagcgaagatcggactaactaactga
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