Mugil cephalus (flathead mullet): 125020834
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Entry
125020834 CDS
T08342
Symbol
srrT
Name
(RefSeq) serrate RNA effector molecule homolog isoform X1
KO
K27103
serrate RNA effector molecule
Organism
mcep
Mugil cephalus (flathead mullet)
Brite
KEGG Orthology (KO) [BR:
mcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcep03019
]
125020834 (srrT)
Messenger RNA biogenesis [BR:
mcep03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
125020834 (srrT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
125020834
NCBI-ProteinID:
XP_047462325
EnsemblRapid:
ENSMGCG00000004328
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Position
15:complement(2876048..2883332)
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AA seq
881 aa
AA seq
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MGDSDDEYDRRRRDKFRRERSDYDRSREREDRRRDDWNDREWDRGRERRSRGEYRDYDRG
RRERFTPPRHDMSPQQKRMRRDWDDHGGDPYRGVGYDLGYGGGGGGPSYGPPQHWGHPDL
HLMQPHHGIPIQARLGNIHDMDLGPPPPIMKSFKEFLLSLDDSVDETEAVKRYNEYKIDF
RRQQMQDFFLAHKDEEWFRSRYHPDEASRLKAEAQSALLNRLNVFMFLMENSWFDNFSLD
IEQTPAIIKVLDAAVIKMEGGTDHDLRILDMPSEEEEEREKSASVPGGAEPPKREDLKSL
GSDRKPSVEQEKNEKEESDSANAERAATAEGDDVKEETEKEAAKVDMPEPKKPRRKRKRS
GDSDDEASASESDSDSDSDSNSNCSDKPVKKEEVEDKDEEEEEGEEEKPKENSEEDKKEE
KKPKDDAPRPRPLHKTCSLFMRNIAPTISRAEIIALCRRYPGFLRVCLSDPHPERRFFRR
CWVTFDRSVNIKEVCWNLQNIRLRDCELAPGVNRDLARRVRHVNGITQHKQVLRNDIKLA
AKLIHALDEKGALWSIKSQEEGQSTELQAQNPILKNITDYLIEEVSAEEEELLGSGSGMD
TEESAKEGNPAETTVERDDKLAKVLDRLILYLRIVHSIDYYNTCEYPSEDEMPNRCGMIH
VRGPIPPNRITHGEVQQWQKMMEEKLIPLFSLKEVLSEEEASKMGRKDPEEEVEKFVSAN
TQELGKDKWLCPLSGKKFKGPEFVRKHILNKHGDKIEEVKKEVTFFNNFLMDAKRPSLPE
MKLPPLPGPGQGLLSPTMPFPPQGPQGPMGFAQPRPPLMGYGAGGPPYPPNQYGGGRGNY
DNFRGQGGYLGKPRNIRMSRGDPRNIIEYRDLDAPDDMDFF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtgatgatgagtatgatcgcagaagaagagacaaattcaggcgggagagg
agtgactatgaccgatcaagggagagggaggacagacgcagagatgactggaacgacagg
gagtgggacagaggcagggaacgacgtagccgtggagagtaccgggattatgacagaggt
cgcagggagagatttaccccacccagacacgacatgagcccccagcagaaacgcatgaga
agagactgggatgaccatggtggagacccttaccgtggtgtgggatacgacttgggttat
ggtggtggaggagggggtcccagctatggaccaccacagcactggggccatcctgacctg
cacctcatgcagcctcatcatggcatccccattcaagcaaggcttggtaacatccacgac
atggacttgggtcctcctcctccaataatgaagagctttaaggagtttctgctgtccttg
gacgattctgtggatgaaaccgaagcagtcaaacgctacaatgagtacaagattgacttc
cgccgacagcagatgcaggacttcttcttggctcataaagatgaagagtggtttaggtcc
aggtaccacccagatgaggccagtcgacttaaggcagaggcccagagtgccctgctcaac
cgcctgaacgtctttatgttcctgatggagaatagctggtttgataacttctccttggac
attgaacagactccagccatcatcaaggttctggacgcagctgtgataaaaatggaaggt
gggacggatcatgatcttcgtatcctggacatgccatctgaagaagaagaagagagggaa
aagtcggcatctgttccaggtggtgctgagcctcccaagagagaggacctcaaatcactg
ggcagtgaccgcaaaccctcagtagaacaagaaaaaaatgaaaaggaggagagcgactct
gccaacgctgaaagggctgccacagcagaaggggatgatgtgaaagaggagactgagaaa
gaagctgccaaagtagacatgcctgaacctaagaagccaagaagaaagaggaagcgcagc
ggagacagcgatgacgaagccagtgcctcagagagcgactccgactctgactcagactcc
aactctaactgttctgacaaacctgtgaagaaggaggaggtggaagacaaggatgaggag
gaagaggaaggcgaagaggagaaaccaaaggagaactctgaggaggacaagaaagaagag
aagaagccaaaagatgacgctcccagaccacggcctctccacaagacttgctctttgttt
atgaggaacattgcccccaccatttctagggctgagattattgctctgtgtcgacgatac
ccggggtttctgcgtgtttgcctgtctgacccacatcctgagcgcaggtttttcagacgt
tgctgggtgacgtttgaccgtagcgtgaacatcaaagaggtctgctggaaccttcagaac
atccgactgcgagactgtgaactggcaccaggggtgaacagggacctggctcggagggtg
cgtcatgttaatggcatcactcaacacaagcaggtgctccgcaacgacatcaagctggct
gccaagctcatacatgccttggatgaaaagggggccctgtggagcattaagtctcaggaa
gaagggcagagcactgagttgcaggctcagaaccccatcttgaaaaatattaccgactac
ctgatagaggaggtgagcgctgaggaggaggagcttcttggttcagggagtggcatggat
actgaggagagcgccaaggaaggcaaccctgctgagaccactgtggagagggatgacaag
ctagccaaggttttggaccgtttgatcttgtatctgcgtattgtgcattccattgactac
tacaacacatgtgaataccccagtgaggatgaaatgcccaatcgctgtggcatgatccat
gtacgtggacccattcctccaaaccgcatcacacatggagaagtgcaacaatggcagaag
atgatggaggagaagttgattcccttgtttagtttgaaagaagtcctgtctgaggaagag
gcgtcaaaaatgggccgcaaggatccagaagaagaggtggaaaagtttgtgtctgctaac
acgcaagagctgggaaaggacaaatggctctgtcctctaagtggcaagaaattcaagggc
ccagagtttgtgcggaaacacatcctgaacaagcacggggacaagatcgaggaagtgaaa
aaggaggtgacattctttaacaattttctgatggatgctaagagaccgtcactgccagag
atgaaactccctcctcttccaggcccaggccaaggtttgctttctcccactatgccattc
cctcctcagggcccacagggtccgatgggttttgcacaacctcgtccaccactcatgggc
tacggtgcaggtggacctccttacccccccaaccagtatggaggaggcagaggcaactat
gacaacttccgtggacagggaggctacctaggaaagccacgcaacatcagaatgtcacga
ggtgatccacgcaacatcattgagtaccgtgacctggatgcaccagatgacatggacttc
ttttag
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