Macaca fascicularis (crab-eating macaque): 102140711
Help
Entry
102140711 CDS
T02918
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mcf
Macaca fascicularis (crab-eating macaque)
Pathway
mcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102140711 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcf03400
]
102140711 (LIG3)
Enzymes [BR:
mcf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
102140711 (LIG3)
DNA repair and recombination proteins [BR:
mcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
102140711 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
102140711
NCBI-ProteinID:
XP_005583486
Ensembl:
ENSMFAG00000036202
UniProt:
A0A2K5VCG8
LinkDB
All DBs
Position
16:complement(47747820..47771196)
Genome browser
AA seq
1009 aa
AA seq
DB search
MSLAFKIPFPQTLRALSRKELYLFREHHRPDVRQFSQWSETDLLHGHPVFLRRKPVLSFQ
GSHLRSRATCLVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGICRIG
KVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDNEKEQITQH
IADLSSKAASTPKKKAVVQAKLTTTGQVTSPVKSASFVTNNNPRKFSGFSAKPNNSGEAP
SSPTPKRSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGFH
GDVYLTVKLLLPGVVKTVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFEQ
SKSFPPAAKSLLTIQEVDEFLLRLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHDL
KMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLHNAQEVEKEPGQRRALSVQASLMTP
VQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKDYIPQAFPGGHSMILDSEVLLIDNKTGRPLPFGTLGVHKKAAFQDANVCLFVFDCIYF
NDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKRVTKASDLADMITRVIREGLEGLVLK
DVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPGS
QKWCTVTKCAGGHDDATLARLQNELDMVKISKDPSKIPSWLKVNKIYYPDFIVPDPKKAA
VWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKADFTV
VAGDEGSSTTGGSSEENKGPSGSAVSRKAPSKPSASTKKAEGKLSNSNSKGGNMLTAKPS
AVKVGEKLAMKSSPVKVGEKRKAADETLCQTKVLLDIFTGVRLYLPPSTPDFSRLRRYFV
AFDGDLVQEFDMTSATHVLGSRDKNPAAQQVSPEWIWACIRKRRLVAPC
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggctttcaagatcccctttccacaaaccctccgtgcactcagccgaaaagaa
ctgtacctattccgagaacatcacaggcctgatgtaagacaattcagccagtggtcagaa
acagatctgcttcatggacaccctgtcttcctgagaagaaagcctgttctgtcattccag
ggaagccatctaagatcacgtgccacctgccttgttttcttgccagggttgcatgtggga
ctctgcagtggcccctgtgagatggctgagcaacggttctgtgtggactatgccaagcgt
ggcacagctggctgcaaaaaatgcaaggaaaagattgtgaagggcatatgccgaattggc
aaagtggtgcccaatcccttctcagagtctgggggtgatatgaaagagtggtaccacatt
aaatgcatgtttgagaaactagagcgggcccgggccaccacaaaaaaaatcgaggacctc
acagagctggaaggctgggaagagctggaagataatgagaaggaacagataacccagcac
attgcagatctgtcttctaaggcagcaagtacaccaaagaagaaagctgttgtccaggct
aagttgacaaccactggccaggtgacttctccagtgaaaagcgcctcatttgtcaccaat
aacaatccccggaaattttctggcttttcagccaagcccaacaactctggggaagccccc
tcaagccccacccctaagagaagtctgtcttcaagcaaatgtgaccccaagcataaggac
tgtctgctacgggagtttcgaaagttatgcgccatggtggccgataatcctagctacaac
acgaagacccagatcatccaggacttcctgcggaaaggctcagcaggagatggtttccac
ggtgatgtgtacctaacggtgaagctgctgctgccaggagtcgttaagactgtttacaac
ttgaatgataagcagattgtgaagcttttcagtcgcatttttaactgcaacccagatgat
atggcacgggacctagagcagggtgacgtgtcagagacgatcagagtcttctttgagcag
agcaagtctttccccccagctgccaagagcctccttaccatccaggaggtggatgagttc
cttctgcggctgtccaggctcaccaaggaggatgagcagcaacaggccctgcaggacatt
gcctccaggtgtacagccaatgatcttaaatgcatcatcaggttgatcaaacatgatctg
aagatgaactcaggtgcaaaacatgtgttagacgcccttgaccccaatgcctatgaagcc
ttcaaagcctcgcgcaacctgcaggatgtggtggaacgggtccttcacaatgcgcaggag
gtggagaaggagccgggccagagacgagctctgagcgtccaggcctcgctgatgacaccc
gtgcagcccatgctggcggaggcctgcaagtccattgagtacgcaatgaagaaatgtccc
aatggcatgttctctgagatcaagtacgatggagagcgagtccaagtgcataagaatgga
gaccacttcagctacttcagccgcagtctcaagcccgtcctgcctcacaaggtagcccac
tttaaggactacatcccccaggcttttcctgggggacacagcatgatcttggattctgag
gtgcttctgattgacaacaagacaggcagaccactgccctttgggactctgggagtgcac
aagaaagcagcctttcaggatgctaatgtctgcctgtttgtttttgattgtatctacttt
aatgatgtcagcttgatggacaggcctctgtgtgagcggcggaagtttcttcatgacaac
atggttgaaattccaaaccggatcatgttctcagaaatgaagcgagtcacaaaagcttcg
gacttggctgacatgataacccgggtgatccgggagggattggaggggctggtgctgaag
gatgtgaagggtacatatgagcctgggaagcggcactggctgaaagtgaagaaggactat
ttgaatgagggggccatggccgacacagctgacctggtggtccttggggccttctatggg
caagggagcaaaggtggcatgatgtcaatcttcctcatgggctgctacgaccctgggagc
cagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgacgccacgcttgcccgc
ctgcagaatgaactagacatggtgaagatcagcaaggaccccagcaaaatacctagctgg
ctgaaagtcaacaagatctactatcctgacttcatcgtcccagacccaaagaaagctgcc
gtgtgggagatcacaggggctgaattctccaaatcggaggctcacacagctgatgggatc
tccatccgattccctcgctgcacccgaatccgagatgataaggactggaaatctgccact
aaccttccccaactcaaggaactgtaccagttgtccaaggagaaggcagacttcactgta
gtggctggagatgaggggagctccactacagggggtagcagtgaagagaataagggtccc
tcagggtctgctgtgtcccgcaaggcccccagcaagccctctgccagtaccaagaaagca
gaagggaagctgagtaactccaacagcaaaggcggcaacatgctgactgcaaagccttct
gctgtgaaggtgggagagaagctggccatgaagtcttctccagtgaaagtaggggagaag
cggaaagctgctgatgagaccctgtgccaaacaaaggttctgttggacatcttcactgga
gtgcggctttacttgccaccctccacaccagacttcagccgtctcagacgctactttgtg
gcattcgacggggacctggtacaggaatttgatatgacctcagccacgcacgtgctgggt
agcagggacaagaaccctgcggcccagcaggtctccccagagtggatttgggcatgtatc
cggaaacggagactggtagctccctgctag
DBGET
integrated database retrieval system
