Momordica charantia (bitter melon): 111005697
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Entry
111005697 CDS
T05045
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mcha
Momordica charantia (bitter melon)
Pathway
mcha03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcha00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111005697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcha03009
]
111005697
Ribosome biogenesis [BR:
mcha03009
]
Eukaryotic type
Pre-60S particles
RNases
111005697
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
111005697
NCBI-ProteinID:
XP_022132992
UniProt:
A0A6J1BVD3
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MEDKFATAEKKVLVEMVRLAQKRGMRGGEGDWKEFLNSHDPKFGANMSDPSKRSNDMLIA
FLKTFSKEDDLMFLDKVLQCNEKRNFVKQVSQSTSDKESPEQRLVRLTLEHPQYPLEYSF
PSYDKGWIVTKFSQKSKALKSNSMYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVK
PRKSIKDYRTEITGISPGDLDGVTCSLDDIQKSMKKLLSPGTILVGHSLNNDLHALKLDH
ARVIDTSFIFKYSNGSIYRRPSLNKLCKSVLGYELRKEGAPHNCLHDAQAAMKLVLSKLE
SKVDDVIVVADEDTPQIGMEKLLLHRVPIHVPSEDLAGVIRGDFTIELKPSKKGQGDIYS
AFAIFKNPEEAQQAFEQVEGSPDKDSSGRPQKLIKFQLSSGSTVSIYVRKMGQNDFAEKF
SSKKRDLEVIENLVMSKKQKTDQNIAVETIANSSRCCDHVEEIERLKQELKQKEDSSHCC
DHLKEVESLKEELRRKDYELSILHKAITIVKKDNKKRKGKKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagttcgctacagcagagaagaaggtgctcgtcgagatggtgcggttggcc
caaaagcgaggaatgagaggtggcgaaggagactggaaggagtttcttaatagtcatgat
cctaagttcggggctaacatgagtgacccgtctaagaggtccaatgatatgttgattgct
tttctcaagacatttagtaaagaggatgatttgatgtttttggacaaagtactccagtgt
aacgagaagcgtaattttgtgaagcaagtatcgcagagcacttcagacaaagaatcacct
gagcagaggctggttcggcttacacttgaacacccacagtacccattggaatattcattt
ccgtcgtatgataagggatggattgttaccaaattcagccaaaagtctaaagcactaaaa
tcaaattcgatgtatgccattgattgtgagatggttctctgtgaagatggaacagaaaac
ttggtgagggtttgcatggtggatcgtgacttacaagtgaaaattgatgaacttgtaaaa
cctaggaaatcaattaaggactacagaactgagataactggaatttctcctggggatttg
gatggagttacttgttctctggatgatatacagaaatccatgaagaaattgttgtcacct
ggaactattttggtaggccacagtctgaacaatgatctccatgcacttaagttagatcat
gcaagggtgattgacacctcatttatcttcaagtattccaatggatctatctatagaagg
ccttctttgaataagctgtgtaagtctgtcttgggttatgaactccggaaggagggtgct
ccacataattgtctacatgatgctcaggctgccatgaaacttgttctctcaaagcttgag
agcaaagttgatgatgtgattgtcgtagctgacgaggatacaccacaaattggtatggag
aagttactccttcatagagtaccaattcatgtaccaagtgaagacttagctggtgttatc
cgtggggacttcacaattgaactcaagccatctaagaaaggtcaaggggatatatattct
gcatttgccatttttaagaaccccgaggaggcacagcaggcatttgaacaggtcgaaggc
agcccagataaggattcatctggacggccacaaaagctcattaaatttcaactcagttca
gggtccactgttagtatctacgttcgtaaaatgggacaaaatgattttgctgagaaattc
tcgtctaaaaagagagatttggaggtgattgaaaacctagtcatgtccaaaaaacagaag
actgaccagaatattgcagtggagacgattgcaaactcaagtagatgttgcgaccatgta
gaagagattgaaagattgaagcaagaattgaaacaaaaggaggactcaagtcattgctgt
gatcacttgaaagaggttgaaagcctgaaggaagaattgagaaggaaggattatgaactt
agtatcctgcataaggctatcactattgtgaagaaggataacaaaaagagaaagggaaag
aagaagtaa
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