Mycobacterium intracellulare subsp. chimaera: AN480_05845
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Entry
AN480_05845 CDS
T04926
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mchi
Mycobacterium intracellulare subsp. chimaera
Pathway
mchi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mchi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AN480_05845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mchi03400
]
AN480_05845
Enzymes [BR:
mchi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AN480_05845
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AN480_05845
DNA repair and recombination proteins [BR:
mchi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AN480_05845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AOS91079
UniProt:
A0A1Y0T1S2
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All DBs
Position
1198742..1199605
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AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRNAVGLTVGRVDIAALSVLKTFDPPISALHGQTVVGADRWGKYLG
LRTDDLYLVAHLSRAGWLRWSDKLAAAPLRPGKGPIALRVHLGTPGEAPGFDLTEAGTQK
RLAVWLVSDPQQIPQIASLGPDALDLGPDDLARVLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSEKQLAALHDAMITVLTDAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgagatcgaagcgctggccgatcatctacggcgcaacgccgtgggc
ctgacggtcggccgcgtcgacatcgccgccctgtccgtcctgaagaccttcgacccaccg
atcagcgcgctgcacggccagaccgtggtcggcgccgaccgctggggcaaatacctgggg
ctgcggacggacgacctctacctggtcgcccacctgtcccgggcgggctggttgcggtgg
tccgacaagctggccgcggcgccgctgcgccccggcaagggcccgatcgcgctgcgggtg
cacctgggcacgcccggggaggcgcccggcttcgacctcaccgaggccggcacccagaag
cggctggcggtgtggctggtaagcgacccgcagcagattccgcagatcgcctcactcggg
ccggacgcgctggacctcggccccgacgacctggcccgcgttctggcgggcaacaccggg
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctacagc
gacgagatcttgcacgttgcgaagatctcgccgttcgccaccgccggcaagctgtccgag
aagcagctcgccgcgctgcacgacgccatgatcaccgtgctcaccgacgcggtgagccgc
tccgtcggccagggcgcggccacgctcaagggtgagaagcgctccggattgcgcgtgcac
gcccgcacgggactgccctgcccggtgtgcggggacaccgtgcgcgaagtgtcattcgcg
gacaagtcttttcagtattgtccgacgtgtcagaccggaggcaaggtcctggccgaccgg
cggatgtcgcgtttgctgaagtag
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