Methanothrix soehngenii: MCON_0764
Help
Entry
MCON_0764 CDS
T01468
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mcj
Methanothrix soehngenii
Brite
KEGG Orthology (KO) [BR:
mcj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcj03032
]
MCON_0764 (topA)
03400 DNA repair and recombination proteins [BR:
mcj03400
]
MCON_0764 (topA)
Enzymes [BR:
mcj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MCON_0764 (topA)
DNA replication proteins [BR:
mcj03032
]
Prokaryotic type
DNA Topoisomerases
MCON_0764 (topA)
DNA repair and recombination proteins [BR:
mcj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MCON_0764 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
HHH_5
DUF4332
RAD51D_N
HHH
IMS_HHH
Cdd1
RecR_HhH
DUF3718
Motif
Other DBs
NCBI-ProteinID:
AEB67569
UniProt:
F4BXY5
LinkDB
All DBs
Position
680309..682609
Genome browser
AA seq
766 aa
AA seq
DB search
MHLIIAEKHDAAKRIAQILSGNKPRPYRIGGVEAFKFDDKVVMGLSGHIVGVDYPPGYNN
WQKVDCKELIRAEIVVRPINDKIVNALRSLGKEADRITVATDYDREGELIGVEALKIAKE
ANPRLREDRVRYSAIVKDEILKAFKNAGKVDYDLAASGEARQIIDLVWGAALTRYISLTS
GRLGKEFLSVGRVQSPTLALIVDREKEIQSFVPKPYWEIYADLERDLRVQHARGRIWEKD
EVDSIVARLGPVGIIRSIQTKPRVEKPPAPFDTTSFISAASGIGFSAANAMRIAEWLYVN
GFISYPRTDNTVYPPSIDLVALTRLFLKGEFSKEAEKLLGGKMVPTRGKRSTTDHPPIYP
TAPVNKSELKEEQWKIYELVVRRFFATLAESCVWDATSLKVDIGPEPFRASGARLVEPGW
RYYYPYSKAEERILPALKEGERLRVLGHSVEAKETQPPARYGQGKLIKLMDELGLGTKST
RHDIISKLYARAYVQGNPMRPTNTAYAVVDTLQKYAPTITKPEMTQTLEKDMTQISEQKI
KEDEVIEESRVMLTSVFDELSCNQEDIGQSLKDGLRTDKIVGTCEKCNSELIIRRGHRGS
RFIGCSGYPECRFTLPLPRSGAVVVTDKVCEKHGMFHIRIINKGKRPWDLGCPHCNFLDW
QAKKALELAEGKESGEGKGAKARPAKKTVRGSGAKAAKKASGPSNADGDGLARLPGIGPK
TLEKLASAGIKTSGELAGANAKSLAAKTGLSEKKIAAWKSAAKALS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcataatagcggagaagcacgatgctgcaaaaaggattgcccaaatcctatcg
ggcaataagccccgaccttaccggataggtggggttgaggccttcaagttcgatgataag
gtggtgatgggcctatccggccacatcgtgggagtggactatcctcctggatacaacaac
tggcagaaggtggattgcaaagaactgatcagggcggagatagtcgtccgtcccatcaat
gacaagatcgtcaatgccctgcgctccctgggaaaggaagccgatcgcatcactgtggcc
acggactacgatcgggagggagagctcatcggagtggaagccctgaagatcgcaaaggag
gcaaaccctcgccttagggaggaccgggtccgctacagcgccatcgtcaaggatgagatc
ctcaaggccttcaagaacgccggcaaggtggactacgacctggcagcctctggagaggcc
agacagatcatagacctagtctggggagcagccttaacccgatatatatctctcacctcc
ggccgtctgggcaaagagtttctctccgtggggagggtccaatcacccaccctggccctg
atcgtcgatcgagagaaggagatccagtcctttgtccccaagccatactgggagatatat
gctgacctggaacgtgatctgcgcgtccagcatgcccggggccgcatctgggagaaggat
gaggttgattctatcgtggcccgtctgggcccggtgggcatcatccgctccatccagaca
aagccgcgcgtcgagaagcccccagcaccctttgacaccaccagcttcatctccgcagcc
agtggaatcggcttttcagcggccaacgccatgcggatagccgaatggctctacgtcaac
ggattcatatcctaccccaggacggacaataccgtctatcccccatccatcgacctggtc
gccctcacccgtctgttcctcaagggcgaattctccaaagaagcggaaaagctcctcgga
ggaaagatggtgcccacccggggcaagaggtcgaccacagatcatcctcctatctacccc
accgctcctgtcaataagagcgagctgaaggaggagcagtggaagatatatgagctggtg
gtgcgccgcttcttcgccaccttagccgaatcctgtgtctgggatgccaccagcctcaag
gtggacatcggccccgagcccttcagggcgagcggtgcccggctggtggaaccgggatgg
aggtactactatccctacagcaaagctgaagagcgcatcctgcccgccctgaaagagggc
gaacgcctccgggtcttgggccacagcgtcgaggccaaagagactcagccaccggccaga
tacggccagggaaagctgatcaagctgatggacgagctgggcctggggaccaagtccacc
cgccatgatatcatcagcaagctctatgcccgcgcttatgtgcagggcaatcccatgcgg
cccacaaacaccgcttatgccgtggtggacaccctgcagaagtacgctcccaccatcacc
aaaccggagatgacccagaccctggagaaggacatgacccagatctccgagcagaagatc
aaggaggatgaggtgatagaggagtcaagggtcatgctcaccagtgtcttcgacgagctg
agctgcaaccaagaggacataggccagtcgctcaaggacggcctgaggacagacaagatc
gtggggacctgcgagaagtgcaattccgagctgataatcaggcgcggccaccggggatcg
cgctttatcggctgctccggctatccggaatgcagattcaccctcccgctccccaggtcg
ggggcagtagtggtaacggataaggtctgtgagaagcacggcatgtttcatatccgcatc
ataaacaagggcaagaggccctgggatctgggctgcccccactgcaacttcttggactgg
caggcgaagaaggctctggagttggcggagggcaaggagagcggggaaggaaaaggggca
aaagcgcggccggcaaagaagacggtcaggggatcaggggccaaagctgccaagaaggcc
agcgggccatccaatgcagatggcgatgggctcgccagattgccgggaattggccccaag
accctggaaaagctggcatcggcagggatcaagacatctggagagctggcaggtgccaat
gccaagagcctcgccgccaagaccggcctgtccgagaagaagatcgccgcctggaagagc
gctgccaaagccctgagctga
DBGET
integrated database retrieval system
