Macrococcoides caseolyticum: MCCL_1259
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Entry
MCCL_1259 CDS
T00848
Name
(GenBank) exodeoxyribonuclease V alpha subunit homolog
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mcl
Macrococcoides caseolyticum
Pathway
mcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MCCL_1259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcl03400
]
MCCL_1259
Enzymes [BR:
mcl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MCCL_1259
DNA repair and recombination proteins [BR:
mcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MCCL_1259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
AAA
UvrD_C
nSTAND3
SLFN-g3_helicase
Helicase_RecD
T2SSE
NB-ARC
AAA_16
AAA_18
AAA_28
Mg_chelatase
AAA_14
TsaE
AAA_12
NACHT
DUF815
Zeta_toxin
NTPase_1
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BAH17966
UniProt:
B9E6Z8
LinkDB
All DBs
Position
complement(1360287..1362677)
Genome browser
AA seq
796 aa
AA seq
DB search
MENMTLFEQSFVKGTITRILFYNNDNFYTVLKAEVIESNEDFDDDATITGYLPQIAEGDT
YTFTGKIITHPKYGKQLQADKFEKDMPQSRDGIIHYLSSDLFKGVGKKTARTIVEVLGED
ALNIILDDKSSLDQVPKLSDEKKELIYSTIHDNQAIEKIMIQLNEFGFGPQLAMKIYQFY
KDDTLKVINESPYQLVMDIEGIGFNKADELAGKLGIDNNHPERLKAALVFTIEQASNQNG
HTYIPDQVLLETSFNLLTKNGSQVNPDRLVIALTELTEEHKLVEHEKNIYIPSLFYSETK
AVQILHRLMNHKNQVKEFEQSEVLMAIGELEALFEVSYAERQKDALITAMNSKLMILTGG
PGTGKTTVVRGIVNLYAELHGLSLDYDDYDGQDYPIVVAAPTGRASKRLQESTGLEATTI
HRLIGWTKENKPDDVLETEITAKLVIIDEMSMVDTWLMFQLMKAVPDDAQIIFVGDQDQL
PSVGPGQVFKDMIDAHIMPQIELNEVYRQQEGSSIVELAHQIKRNEPFDIKKRYNDRSFI
PCTSNQIPEVIEKIVRSAVNKGYDMRDIQVLAPIYRGPAGIRALNKVLQEILNPSDENKR
ELQFGDVYFRTGDKVLQLVNRPEDNVFNGDIGEVTGIFMAAENALNKDVVIVDYDGSEVT
YTKADLMEITHAYCCSIHKSQGSEFPIVIMPVVNQYYRMLQKNILYTGLTRAKQSLIFCG
DVHAFNEGIKRIGNTRFTSFYQFLIDYFNEDEINDKKQDDQGNILPFNVGEMTEDNMHLV
DPMINMEGITPYDFIS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatatgactttgtttgagcaatcctttgtaaaagggacaataacgagaatatta
ttctataacaatgataatttctatactgtgctgaaggctgaagtgattgaatcaaatgaa
gattttgatgatgatgctacgattacaggttatctcccacaaattgcagaaggcgataca
tatacttttaccggtaagattataacgcatccgaagtatggaaagcagctccaggcggat
aaatttgagaaggatatgccacagtcgcgtgacggtattattcattatttatcaagtgat
ttgtttaaaggagtcggtaagaaaacagcgagaacgattgtagaagtgcttggtgaagat
gcactgaacattattcttgatgataaaagtagtcttgaccaggtaccgaagttatcagat
gagaagaaagaattaatctatagcacgattcatgataatcaggcgattgagaaaatcatg
attcagctgaatgaatttgggttcgggccgcagcttgcgatgaagatttatcagttctat
aaggacgatacgctgaaggtgattaatgaatctccgtatcaactcgtgatggatattgaa
gggatcggatttaataaagcggatgaactggcagggaaactcggtatcgataacaatcac
ccagagcgtctgaaagcagcgctcgtgtttacgatagaacaagcctctaaccagaatgga
cacacatatattccggaccaggtattacttgaaacaagcttcaatctactgacgaaaaat
ggcagtcaagtcaatcctgatcgcctcgttatcgcactcactgaactgacagaggaacat
aagctcgttgaacatgagaagaacatctatattccaagtctattctattctgaaacaaaa
gctgtacaaatattgcatcgattaatgaaccataagaatcaggtgaaagagttcgaacag
tcagaagtattgatggcaatcggagaactggaagcactgtttgaagtcagctatgcagaa
cggcagaaagatgcgcttattacggcgatgaactctaagctgatgatattaacgggtggg
cctggtacaggaaagacgacagtcgtacgtggtattgttaatttatatgccgagctgcat
ggcttaagtctagattatgatgactatgacggacaggactatccgattgtcgtcgcagca
ccgactggtcgtgcgtcaaagcgtcttcaggaatcgacgggacttgaagcgacgacgata
cacaggttaattggatggacgaaagaaaataaaccggacgacgtgctggaaaccgaaatt
acagcgaaactggtcattattgatgaaatgtcaatggttgatacgtggcttatgtttcaa
ttgatgaaggctgtaccagacgatgcccagattatatttgtcggtgaccaggaccagctt
ccttcggtcggtccaggtcaagtatttaaggatatgattgatgcacacattatgcctcag
attgaactgaacgaggtgtatagacagcaggaaggttcctcgattgtcgaactagcacat
cagattaagcgcaatgaaccttttgacattaagaaaagatataatgacagaagttttata
ccgtgtacaagcaaccaaattccggaagtgattgagaaaattgtacgcagcgctgtgaat
aaagggtacgatatgcgtgacatacaagtactcgcaccgatatatagggggccagcaggt
atacgtgcattgaataaagtattgcaggaaatactgaatccaagcgatgaaaacaaacgt
gaactgcaatttggtgatgtttatttcagaacgggtgataaagttttgcagcttgtcaat
cgacctgaagataatgtatttaatggtgatattggagaagtcactggtatatttatggca
gctgagaatgcattaaataaagatgttgtgattgttgactatgatggcagtgaagtaacg
tatacgaaagcagatttaatggaaattacacatgcatattgctgttctattcataagtcc
caaggttcggaatttccgatagtaatcatgcctgttgtcaatcagtactacagaatgttg
cagaagaatattctgtatacgggattaacacgtgcaaaacaatccctaatattctgtgga
gatgttcacgcttttaatgaaggaattaagcgtatcggtaatacaaggtttacaagcttc
tatcagtttctaatcgattattttaacgaagacgaaataaatgacaaaaagcaagatgac
caaggtaatatactacctttcaacgtgggggagatgactgaagacaatatgcatcttgtt
gatccgatgatcaatatggaaggtataacaccatatgattttataagttga
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