Mastomys coucha (southern multimammate mouse): 116076847
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Entry
116076847 CDS
T07224
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1a-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116076847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116076847
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mcoc04054
]
116076847
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116076847
Pattern recognition receptors [BR:
mcoc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116076847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
AAA_16
NB-ARC
AAA_30
AAA_22
AAA_14
nSTAND3
AAA
SPO11_like
Motif
Other DBs
NCBI-GeneID:
116076847
NCBI-ProteinID:
XP_031206712
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
MSGRDKNPLALEQEQKQYQDELHTHALSEDSITMSIPQSEKASSTEEVQHENQEDLDPMH
NRRKQMDLELFQTKDQEVMLRTFPEVYMRQEETLHQKQSLKSENLFQNFTNLLIFQKLYP
RGSENLMRESWHPCVPEKGGHMIEIEDLFGPNTGTQKEPQLVIIEGVAGIGKSTLARQVK
RAWKEGQLYKDRFQNVFFFSCRELAQCKQLSLAELIAQGQEVPTASIRQILSHPEKLLFI
LDGIDEPAWFLEELNPDLCLHWSQSQPVNTLLGSLLGKSILPEASFLLTARTTAIQKIIP
SLEQPCRFEVLGFSEFERKDYFYKYFTKEKDAITAFRLVESNPVLLTLCEVPWVCWLVCI
CLKRQIEQRRDLSLTTHTTTALCLKYLFLTIPGQHKESQLKALCLLAADGIFQRRTLFSE
KDLCEQGLEEDAIATFLKIGVLQKQPNSLSYSFAHFCLQEFFAAMFYILEDSEERYGDMK
NDRIVETLVERYGRQSLFEAPTVHFLFGLLSKEGLKKMEKFFSYSLPRKTNLKLLWHILE
KSKPYQPPCLGLLHCLYENQEMELLTHIMHNLQGPIVPGPDDKAHTVLQMNEKHLVVQTD
MELMVVTFCIKFCYHVRSLQLNRKGHQEHKLTAPRIVLYRWTPITDASWKIFFSNLKFTR
NLEELDLSGNPLSYSAMQSLYTTLRHSFFRLKTLWLVECGLNSSYCSLLASALGAHYSLT
ELDLQLNDLGDDGVKLLCQSLRNHDNLSILRLDQAPLSDEVITELRALETKNPKLHISST
WKPHVMVPTKKMNKEEVSDSTTSFKKQRQQSGDKDMEPLRTYVIFWGSTGPVATEVVDRE
GKLYRVQLPMAGSYHCPSTGLHFEVTRAVTIKIEFCAWSQYLDKIPFPQSHMVAGPLFDI
KAEQGAVTAVYLPHFVALQEGRVDSSLFCVAHFQEHGMILETPARVDQRHAVLENPSFSP
IGVLLRMIPAVGHFIPITSITLIYYHLYLEDVTFHLYLVPNDCTIRKAIDDEEMKFQFVR
INKPPPVAALYLGSRYIVSGSKKVEIIPKELELCYRGPKESQLFSEICVGHMGSGIKLQI
RDKRNMNLIWQALMKPGDLRPERSKIPSVPKGASSLFHFVDQHREQLVARVTSVDTLLDK
LHSLVLSEDSYEAVRAEATNQDKMRKLFSLSRSWSRDCKDQFYQALKETHPHLIMDLLEK
SDRVSLGS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagagacaagaatccactggccttggagcaagaacagaagcagtaccaggat
gagctgcatactcatgcattatctgaggattctatcaccatgagcatacctcagtctgag
aaggcaagtagcacagaggaggtgcagcatgagaatcaagaggacttggaccccatgcat
aacaggaggaagcagatggatctggagttgtttcagaccaaagaccaagaagtgatgctg
agaacatttccagaagtatatatgaggcaagaagagactcttcaccagaaacagtcattg
aaaagtgagaatttgttccaaaattttacaaacctactaatcttccaaaaattgtaccca
agaggctcagagaacttgatgagggaaagctggcatccatgtgtaccagaaaaaggagga
catatgattgagatcgaagacttatttggcccaaacacaggtacccagaaagagcctcag
ttggtcataatagagggggttgctgggattgggaagtcaacactggccaggcaagtgaag
agagcctggaaggaaggccagctctacaaggatcgcttccagaatgtcttcttcttcagc
tgcagagagctggcccagtgcaaacagctgagtctggctgagctcatagcacaaggtcag
gaagtgcccactgcttccattaggcagatcctgtctcaccctgagaagctgctcttcatc
ctggatggcatagatgaaccagcatggttcttagaggagctgaatcctgacctctgcctg
cattggagtcaatcacagcctgtgaacacactgctgggcagtttactagggaaatccatc
cttcctgaggcttccttcctgctcacagctcggacaacagctatacagaagatcattcct
tccttggagcagccatgtcggtttgaagttttaggattctctgagtttgaacggaaagac
tatttctacaaatattttacaaaggaaaaagatgcaattactgcttttagattagttgaa
tctaacccagtgctcctgaccctgtgtgaggttccctgggtgtgctggttggtctgcatt
tgcctgaaaaggcagatagagcaaagaagagacctctcactgaccacacacaccaccaca
gccctctgcctgaaataccttttcctgacaatcccaggtcagcacaaggaaagccagctc
aaagccctctgcttgctggctgctgatgggatcttccaaagaaggaccctgttcagtgaa
aaagatctctgtgagcaagggttagaagaggatgccattgccactttcctgaagattggt
gtccttcaaaagcagcccaactctctgagctacagctttgcccacttttgtctccaggag
ttctttgcagcaatgttctacatcttggaggatagtgaggaaagatatggtgatatgaaa
aatgacagaattgtggaaacactggtagaacgatatggaaggcaaagcctgtttgaggca
cccactgtgcactttctgtttggtcttttgagtaaagagggattgaaaaaaatggaaaag
ttcttttcctacagccttcctaggaagacaaacttgaagctgttatggcacatcctagag
aaatcaaaaccctatcaaccaccttgtcttggtttgctccactgtctgtatgaaaatcag
gaaatggagctcctgacacacataatgcataatcttcaaggaccaatagtgcctggccca
gatgataaggcacacacagtgttacagatgaatgagaagcacctggtggtacagacagat
atggagctcatggtggtcactttctgtattaagttctgctatcacgtgaggagtcttcag
ctgaataggaaaggccatcaggaacataagttgacagcccccaggatagttctgtacaga
tggacaccaatcaccgatgccagttggaaaatcttcttctccaatcttaaattcaccaga
aacctggaggagctggacctaagtggaaatccactgagttattctgcaatgcaaagtctc
tatacaaccttgcgacactctttttttcgattaaagaccttgtggcttgttgaatgtggc
ctcaactcctcatactgctcactcctggcttcagcgctcggtgcccactatagcctgact
gagctagacttgcagctaaatgacctgggtgacgacggtgtgaagctgctgtgtcagagt
ctcaggaatcatgacaacctcagcatcctgcggctggaccaggcccctcttagtgacgag
gtgattacagagctcagggccctggagacaaagaatccgaagctgcacatctccagcaca
tggaaaccacatgtgatggtccccactaagaaaatgaataaagaagaagtgagtgatagc
acaacctcattcaagaagcagagacaacagtcaggagacaaagacatggaacctctgagg
acttatgttatcttctggggctctacaggacctgtggctactgaggtggttgacagagag
gggaaactgtatcgagttcaattgcccatggctggttcctaccactgtcccagcacagga
ctccactttgaggtgacaagggcagtgacaatcaagattgaattctgtgcctggagccaa
tacctggacaagattccctttccacagagtcacatggtggctggacctctgtttgacatc
aaggctgagcaaggagctgtgactgcagtgtacctccctcattttgtggctctccaagag
ggaagggtggacagctccttgttctgtgttgcccactttcaagaacatgggatgatccta
gaaacgccagcaagggtggaccagcgtcacgcagtactggagaacccaagcttctccccg
ataggagttctactaagaatgattcctgctgttggacacttcatccccatcacttccatc
acgttgatctactatcacctctatctcgaggatgtcacctttcacctttacctggtcccc
aatgactgcactattcggaaggccattgatgatgaagaaatgaagtttcagtttgtacgc
ataaacaagccacccccagtagccgctctttatcttggttcccgctatatcgtgtctgga
tccaaaaaggtggaaattatcccaaaggaacttgaactgtgctaccgaggccccaaggaa
tcacagctcttctctgagatctgcgttggacacatgggttcagggattaagctacaaatc
agagacaagaggaatatgaatctcatatggcaggccttgatgaaaccaggagacctcaga
cccgagcgatccaagattccttcagtccccaaaggtgcttcttccttgtttcactttgtg
gaccagcatcgggagcagctggtggcccgagtgacatcagtggacactcttttggacaag
ctgcatagtctggtgctgagtgaagattcctatgaggcagtgcgggctgaggccacaaac
caagacaagatgaggaagctcttcagcctcagccggtcctggagtcgagactgcaaagac
cagttctaccaagctctgaaggagacccatcctcacttgatcatggacctccttgagaaa
tcagacagggtctctttgggatcctaa
DBGET
integrated database retrieval system
