Mastomys coucha (southern multimammate mouse): 116084252
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Entry
116084252 CDS
T07224
Symbol
Kcnma1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04022
cGMP-PKG signaling pathway
mcoc04270
Vascular smooth muscle contraction
mcoc04911
Insulin secretion
mcoc04924
Renin secretion
mcoc04970
Salivary secretion
mcoc04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
116084252 (Kcnma1)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
116084252 (Kcnma1)
04924 Renin secretion
116084252 (Kcnma1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116084252 (Kcnma1)
09154 Digestive system
04970 Salivary secretion
116084252 (Kcnma1)
04972 Pancreatic secretion
116084252 (Kcnma1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcoc04040
]
116084252 (Kcnma1)
Ion channels [BR:
mcoc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116084252 (Kcnma1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
116084252
NCBI-ProteinID:
XP_031216909
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MANGGGGGGGGGSSGGGGGGGGGGSGLRMSSNIHANHLSLDASSSSSSSSSSSSSSSSSS
SSSVHEPKMDALIIPVTMEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTV
CCHCGGKTKEAQKINNGSSQADGTLKPVDEKEEVVAAEVGWMTSVKDWAGVMISAQTLTG
RVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAAN
DKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNS
IKLVNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGD
VYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHIT
LESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLA
RVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNI
PSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGV
SNEMYTEYLSSAFVGLSFPTVCELCFVKLKLLMIAIEYKSANRESRSRKRILINPGNHLK
IQEGTLGFFIASDAKEVKRAFFYCKACHDDVTDPKRIKKCGCRRLIYSKMSIYKRMRRAC
CFDCGRSERDCSCMSGRVRGNVDTLERTFPLSSVSVNDCSTSFRAFEDEQPPTLSPKKKQ
RNGGMRNSPNTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCAAKEIEKVILTR
SEAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREW
ETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNI
KSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELAKPGK
LPLVSVNQEKNSGTHILMITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVL
DSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTLANRDRCRVAQL
ALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYE
FELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSIPSTANRPNRPKSRE
SRDKQNRKEMVYR
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacggtggcggcggcggcggcggcggcggcagcagcggcggcggcggcggcggc
ggcggcggaggcagcggtcttagaatgagcagcaatatccacgcgaaccatctcagccta
gacgcgtcctcctcctcctcttcctcctcctcctcttcttcttcctcctcctcttcctcc
tcgtcctcggtccacgagcccaagatggatgcgctcatcatcccggtgaccatggaggtg
ccgtgcgacagccggggccaacgcatgtggtgggctttcttggcctcctccatggtgact
ttcttcgggggccttttcatcatcttgctctggcggacgctcaagtacctgtggaccgtt
tgctgccactgcgggggcaagacgaaggaggcccagaagataaacaatggctccagccag
gcagatggtactctcaagccagtggatgaaaaagaggaggtggtggcagccgaggtcggc
tggatgacatctgtgaaggactgggcaggggtgatgatatccgcccagacactgactggc
agagttctggttgtgttagtctttgctctcagcattggtgcccttgtaatatacttcata
gactcgtcaaacccaatagaatcctgccagaatttctacaaagatttcacattacagatc
gacatggctttcaacgtgttcttcctcctctactttggcttgaggtttattgcagccaat
gataagctgtggttctggctggaagtgaattcagtagtagatttcttcacagtccctcct
gtgtttgtgtctgtgtacttaaacagaagttggcttggcttgagatttttaagagctctc
agactgatacagttttcagaaattttgcagtttctgaatatccttaaaacaagtaattcc
atcaagctggtgaatctgctctccatatttatcagcacgtggctgactgcagctggattc
atccacttggtagagaattcaggggacccatgggaaaatttccaaaacaaccaggcactt
acgtattgggaatgtgtctacttactcatggtcacaatgtctacagtgggttacggggat
gtttatgcaaaaaccacgcttggacgtctcttcatggtcttcttcatcctcggaggactg
gccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgcaagaaatac
gggggctcctatagcgcggttagtggaagaaagcacattgtggtctgtggacacattact
ctggagagtgtctctaacttcctgaaggactttctgcacaaggaccgggatgatgtcaac
gtggagattgtctttcttcacaacatctcccctaaccttgagcttgaggctctgttcaaa
cggcatttcactcaggtggagttttatcagggctctgtcctcaatccacatgatcttgcc
agagtcaagatagagtcagcagatgcatgcctgatccttgccaataagtactgtgctgac
ccggatgcagaagacgcctccaacatcatgagagtgatctctataaagaactaccacccg
aagatcaggatcattactcagatgctgcagtatcataacaaggcccatctgctcaacatc
cccagctggaactggaaagagggtgatgacgcaatatgccttgcagagctcaagttgggt
ttcatagcccagagctgtctggctcaaggcctctccacaatgcttgccaatctcttctct
atgaggtcattcataaagattgaggaagacacatggcagaaatactacttggaaggagtc
tccaatgaaatgtacacagaatatctctccagtgccttcgtgggtctgtccttccctact
gtttgtgagctgtgttttgtgaagcttaagctcctgatgatagccattgagtacaagtct
gccaacagagagagccgaagccgaaagcgaatattaattaaccctgggaaccaccttaag
atccaagaaggtactttaggatttttcatcgcaagtgatgccaaagaagttaaaagggca
tttttttactgcaaggcctgtcatgatgacgtcacagatcccaaaagaattaaaaaatgc
ggctgcaggcggctgatctattccaagatgtccatctacaagagaatgagacgagcatgt
tgttttgattgcggacgttctgagcgtgactgctcgtgcatgtcaggccgtgtgcgtggt
aacgtggacacccttgagagaaccttcccgctttcttctgtctctgttaatgattgctcc
accagtttccgtgcctttgaagatgagcagccgccaacactgtcaccaaaaaaaaaacaa
cgtaatgggggcatgaggaactcacccaacacctcgccaaagctgatgaggcatgacccc
ttgttaattcctggcaatgaccagattgacaacatggactccaatgtgaaaaagtacgac
tccactgggatgtttcactggtgtgcagccaaggagattgagaaagtcatcttgactcga
agtgaagctgccatgactgtcctgagtggtcatgtcgtagtctgcatctttggggatgtc
agctcagccctgattggcctccggaacctggtgatgccgcttcgtgctagcaactttcac
tatcatgagcttaaacacattgtgtttgtgggctccatcgagtacctcaagcgggagtgg
gaaacactgcacaacttccccaaagtgtccatattgcctggtacgccattaagtcgggct
gatttaagggctgtcaacatcaacctctgtgacatgtgcgttatcctgtcagccaatcag
aataatattgatgatacttcgcttcaggacaaggaatgcatcttggcgtcactcaacatc
aaatctatgcagtttgatgacagcatcggggtcttgcaggctaattcccaaggattcaca
cctcctggaatggacagatcatcacctgacaatagcccagtgcatggaatgttacggcag
ccgtccatcacaaccggggtcaacattcccatcatcacagaactcgctaagccgggcaag
ttgcctttggtatcagtcaatcaggaaaaaaacagtgggacgcacattctaatgataacg
gagttggtgaacgatactaatgttcagtttttggaccaagacgatgacgatgacccggac
acagagctgtacctcacacagccctttgcttgtgggacagcatttgccgtcagcgtcctg
gactcactcatgagtgcgacatacttcaatgacaatatcctcaccctaatacggaccctg
gtgacaggaggagccacaccagagctcgaggctctgatagctgaggagaatgcgcttcga
gggggctacagcactccgcagacgctggccaacagggatcgctgccgagtggcccagtta
gccctgttggatgggccctttgcggacttaggggatggtggttgttatggtgatctgttc
tgcaaagctctgaagacatataacatgctttgttttggaatttaccggctgagagatgcc
cacctcagcacccccagccagtgtacaaaaaggtacgtcatcaccaatcccccctacgag
tttgagctcgtaccgacagacctgatcttctgcctgatgcagtttgaccacaacgctggc
caatcccgggccagtctgtctcattcctcccactcctcacagtcgtccagtaagaagagc
tcctccgtccactccatcccgtccacagcaaatcggccgaaccggcccaagtccagggag
tcccgcgacaaacagaacagaaaagaaatggtttacagatga
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integrated database retrieval system
