Mastomys coucha (southern multimammate mouse): 116088725
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Entry
116088725 CDS
T07224
Symbol
Usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcoc01002
]
116088725 (Usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116088725 (Usp40)
Enzymes [BR:
mcoc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116088725 (Usp40)
Peptidases and inhibitors [BR:
mcoc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116088725 (Usp40)
Ubiquitin system [BR:
mcoc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116088725 (Usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
DUF5772
DUF6084
Motif
Other DBs
NCBI-GeneID:
116088725
NCBI-ProteinID:
XP_031224183
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MFGDLFEEDYSSVSSSQYGRGKKLKTKGLEPPAPREFTNLSGIRNQGGTCYLSSLLQTLH
FTPEFREALFSLGPEELGSLEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTIDLTDS
FGWTNDEEMRQHDVQELNRILFSALETSLVGTSGHDLIHRLYHGTIVNQIVCKECKNISE
RQEDFLDLTVAVKNVSGLEDALWNMYVEEEIFDCDNLYHCGTCDRLVTAAKSAKLRKLPP
FLTVSLLRFNFDFVKCERYKDTSCYTFPLQINLKPFCEQSELDDMEYMYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQCQEEISDTDVSVKAPQNEEEADDPLVILKTILLQEEASQI
PVDQLGQKLLKKTGISWNKKYRKQHGPLRKFLQLHPQIFLLSTDESTVSLLRNHFTQTPS
DLQNREQSLHTLASQLPGLHDDTSCPHWFDINDSKVHPIKEKDIIQQFQGKESAYMLFYR
KSTLQRPSEARANPRYRVPCHLLKEMDAANILLQMRRAECDSANSTLELHLHLGPHYRFF
NGALHPAVSQTESIWDLTFDKRKTVGDLRQSIFQLLEFWEGDMVLSVAKRVPAGLHVYHT
LDGDELTLCEAEVADGEDIFVWNGVEVGGVQIQTGFDCEPLLLHILHLELSGEGSKCEQL
VESPHVFPANAEVGTVLTALCTPGGVILMNSVESADEEYWTAVPKEGMKKTFREQGLRNG
SFILVQDSDSDVNSLLPKQGRWTNSVNELNWLQVKNFCQSESEEKQVQIAVTMHTVVFDI
RIKAIKELKLMKELAENSCLRPIDRNGKLLCPVPDTSTLEEAEVKMGSSVGLCLGKAPTS
SQLFLFFALGTDVHPEAEMEVTVEEALSVRDCLKIMLEKSGQQGEMWHLRKMDWCYEAGE
PLCEEDATLKELGIRSGDTLLLTEGRLPPPGHLKMPIWWYQPARLSGHCEIWDHLNCAFS
KGSSWGAAPTQGAPGPEPAEVSLLYLGDMEISEEATLVELKSQAIALPSISKLTVQSPAL
LRVWTVESKRPSRLLRTNWRQLKEYRLGRRAELCLELLQKEEDLGPQDVLLRTQLRIPGE
RAYSLATDLVWDTTRGWTAGSLRQRVADFYSLPVEKIEIAKYFPEKFEWLPISSWNQQVA
KRKKKKNQETLQGGPYYLKDGDTIGIKNLLFDDNDDFSTIRDDIGKENQKRLALEKKRSR
EVHRAQSSDVFSNAGMPTRPRGPEASLSIHVASFR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggacctatttgaagaggattattccagtgtgtcaagtagtcagtatggaaga
gggaagaaattaaagactaaaggtttggagccgcctgcccctagagaattcaccaattta
agtggaatcagaaatcagggtggaacctgttacctcagctcccttcttcagacgcttcat
ttcacacctgaattcagagaagctttattttctcttggtccggaagagcttggttcttta
gaggataaggataaacctgacgcaaaggttcggatcatacctttgcagttgcagcgcttg
tttgctcagcttctactcttagaccaggaggctgcgtccaccatagacctcaccgacagc
tttgggtggaccaacgatgaggaaatgagacagcatgatgtgcaggaactcaaccgaatt
cttttcagtgctttggaaacttctttagttgggacctctggccatgacctcattcatcgc
ctataccatggcaccattgtgaaccagattgtttgcaaagagtgtaagaacatcagtgaa
aggcaggaagacttcttggatttgacagtagcggtcaaaaacgtatctggtttagaagat
gcactctggaacatgtatgtggaggaggaaatttttgactgtgacaacttgtaccactgt
gggacctgtgaccggctggtcacagcagcaaagtctgccaaattgcgtaagctgcctcct
tttcttactgtttcattactaaggtttaattttgattttgtgaaatgtgaacgctacaag
gatactagctgttatacattcccccttcagatcaatctcaagcctttctgtgaacagagt
gaactggatgacatggaatatatgtatgacctcttctccgtcattatccacaaaggtggc
tgctatggaggccattaccatgtgtacattaaagatgttgatcatctcggcaactggcaa
tgtcaagaggagataagtgatacagatgtgagtgtgaaagctccccagaatgaagaagag
gctgatgatccattggtgattctaaaaacaatcttactgcaggaggaggccagtcaaatt
cctgttgatcagctgggccagaaactcttgaaaaaaacaggaatatcttggaacaagaag
tacaggaaacagcatggaccactgcgaaagttcttacagctccatcctcagatatttctg
ctcagcacagatgaaagcacggttagtctcctgaggaaccattttacccagaccccgtct
gatctacagaaccgtgaacagagtctacatacacttgcttcacaactcccaggcttacat
gatgacactagttgcccacactggtttgatatcaatgattccaaagtccatccaatcaaa
gagaaagatatcatacagcagttccagggtaaagaaagtgcctacatgctgttttatagg
aaatccacgttgcaaagaccctctgaagctcgagccaatccaagatacagagttccgtgt
catctgctgaaggaaatggatgcagccaacattctactgcagatgagaagggcagaatgt
gactctgcaaacagtactttggagttgcatctccacttgggtcctcactaccgtttcttc
aatggagctcttcaccctgcagtctctcagacagagagcatatgggacttaacttttgat
aaaagaaaaactgtaggagatctccgtcagtcaatatttcagctattggaattttgggaa
ggagacatggttcttagtgttgcgaagcgtgtgccagcaggacttcatgtgtaccatacc
cttgatggagatgaactgacactgtgtgaagctgaggttgctgatggggaagacatcttt
gtatggaatggggtagaggttggtggagtccaaattcagactggttttgattgtgaacct
ctgctgttacacattcttcatctagaactaagtggtgaaggctcaaagtgtgagcagttg
gtggagtcgccacacgtctttcccgctaatgctgaagtgggcactgtgttgacagccttg
tgcaccccaggaggcgtcatcctcatgaacagtgtggaatctgctgatgaagagtactgg
actgctgttcccaaagaaggcatgaagaagacattcagagagcaaggactcagaaatgga
agctttattttggttcaggattcagacagtgatgttaacagtctgttgcccaaacaagga
agatggaccaacagcgtgaatgagctcaactggctccaagtgaaaaatttctgccagtca
gaatctgaagagaaacaggttcagatagccgtgaccatgcacacagtggtgtttgatatt
cgaattaaagccataaaggaattaaaattaatgaaggaactagctgagaacagctgtttg
agacccattgatagaaacgggaagcttctctgtccagtaccagacactagcactttggag
gaagcagaggtgaagatgggaagctccgtgggtctgtgtctgggaaaagcaccaacttcc
tctcagctgttcctgttttttgctctggggactgacgttcaccctgaggcagagatggaa
gtcacagtagaagaagcactctcagtgagagactgtttaaagataatgctggagaagtca
ggtcagcaaggagagatgtggcacttaaggaaaatggattggtgctatgaagctggtgag
cctttatgtgaagaagatgcaaccctgaaagagcttgggattcgttctggggatactttg
cttttaactgaaggaagacttcctcctccgggtcacttgaagatgcccatctggtggtac
cagcctgcaaggctttcaggacactgtgagatttgggaccacttaaactgtgccttttct
aaaggtagcagctggggagctgctcccacccaaggtgctcctggccccgagcctgcagaa
gtctctctcctctacttgggagatatggagatctcagaagaggccacattggtggaactg
aaatctcaggccattgccttgccttctatttcgaagctcactgtccagtccccggccctg
cttagagtctggacagtggagagcaagcgccccagcaggctcttgcgcactaactggcgg
cagctcaaggagtacagactgggccggagagcagagctctgcctagagctccttcaaaaa
gaggaggacttggggccccaggatgtactgctgaggacacagctacgcatccctggtgag
agagcctactccctggcgacagacctggtatgggacaccaccagaggatggactgctggc
tccttgaggcagagagtggctgacttctattctcttcctgtggagaaaattgaaattgcc
aaatattttcctgaaaagtttgagtggcttccaatatctagctggaaccagcaagttgcc
aagaggaaaaaaaagaaaaaccaagagactctgcaaggagggccatattacctgaaagat
ggagacactattggcattaagaatctcttgtttgatgacaatgatgatttcagcacaatc
agagatgacattgggaaggaaaaccagaagcggctagctctggaaaaaaagagaagccga
gaagtccaccgtgcacagagcagcgatgtgttctccaatgcagggatgcccactaggccc
cggggaccagaagcttctctgtccatccatgttgcaagcttcagatag
DBGET
integrated database retrieval system
