Mastomys coucha (southern multimammate mouse): 116089888
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Entry
116089888 CDS
T07224
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03320
PPAR signaling pathway
mcoc04148
Efferocytosis
mcoc04151
PI3K-Akt signaling pathway
mcoc04659
Th17 cell differentiation
mcoc04919
Thyroid hormone signaling pathway
mcoc04920
Adipocytokine signaling pathway
mcoc04928
Parathyroid hormone synthesis, secretion and action
mcoc04932
Non-alcoholic fatty liver disease
mcoc04976
Bile secretion
mcoc05160
Hepatitis C
mcoc05200
Pathways in cancer
mcoc05202
Transcriptional misregulation in cancer
mcoc05207
Chemical carcinogenesis - receptor activation
mcoc05216
Thyroid cancer
mcoc05222
Small cell lung cancer
mcoc05223
Non-small cell lung cancer
mcoc05226
Gastric cancer
mcoc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116089888 (Rxra)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116089888 (Rxra)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116089888 (Rxra)
09152 Endocrine system
04920 Adipocytokine signaling pathway
116089888 (Rxra)
03320 PPAR signaling pathway
116089888 (Rxra)
04919 Thyroid hormone signaling pathway
116089888 (Rxra)
04928 Parathyroid hormone synthesis, secretion and action
116089888 (Rxra)
09154 Digestive system
04976 Bile secretion
116089888 (Rxra)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116089888 (Rxra)
05202 Transcriptional misregulation in cancer
116089888 (Rxra)
05207 Chemical carcinogenesis - receptor activation
116089888 (Rxra)
09162 Cancer: specific types
05226 Gastric cancer
116089888 (Rxra)
05216 Thyroid cancer
116089888 (Rxra)
05222 Small cell lung cancer
116089888 (Rxra)
05223 Non-small cell lung cancer
116089888 (Rxra)
09172 Infectious disease: viral
05160 Hepatitis C
116089888 (Rxra)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
116089888 (Rxra)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
116089888 (Rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116089888 (Rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcoc03310
]
116089888 (Rxra)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
116089888 (Rxra)
Nuclear receptors [BR:
mcoc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
116089888 (Rxra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
116089888
NCBI-ProteinID:
XP_031225363
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MGTTRWAPGGHCSSRLVGLWFGEGRWPLAVSLPRTESAILPFPDSRPNLDFSTQVNSSSL
NSPTGRGSMAAPSLHPSLGPGIGSPLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPH
SMSVPTTPTLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNGVLKVPAHPSGNMASFTKHIC
AICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKC
LAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYVEANMG
LNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSH
RSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVL
FNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEH
LFFFKLIGDTPIDTFLMEMLEAPHQAT
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggggacgacgcgctgggctccgggaggccactgctcttcccggctcgtcgggctgtgg
tttggagaaggccgatggcccctggctgtctctttgcccaggacggagtctgcgatcttg
ccgttccccgacagcagaccaaacctagacttctctacccaggtgaactcttcgtccctc
aactctccaacgggtcgaggctccatggctgccccctcgctgcatccctctctgggtcct
ggaatcggctctccactgggctcccctgggcagctgcactcacctatcagcaccctgagc
tcccccatcaatggcatgggtccacccttctctgtcatcagctcccccatgggcccgcac
tccatgtcggtacccactacacccacattgggcttcgggactggtagcccccagctcaat
tcacccatgaaccccgtgagcagcagtgaggatatcaagcccccactaggcctcaatggt
gtcctcaaggttcctgcccatccctcaggaaatatggcatccttcaccaagcacatctgt
gctatctgtggggaccgctcctcaggcaaacactatggggtatacagttgtgagggctgc
aagggcttcttcaagaggacagtacgcaaagacctgacctacacctgccgagacaacaag
gactgcctgatcgacaagagacagcggaaccggtgtcagtactgccgctaccagaagtgc
ctggccatgggcatgaagcgggaagccgtgcaggaggagcggcagcggggcaaggaccgg
aatgagaacgaggtggagtccaccagcagtgccaacgaggacatgcctgtagagaagatt
ctggaagctgagctcgctgttgagcccaagactgagacatacgtggaggcaaacatggga
ctgaatcccagctcaccaaatgaccctgttaccaacatctgtcaagcagccgacaagcag
ctcttcactcttgtggagtgggccaagaggatcccacacttttcggagctgcccctggac
gaccaggtcatcctactacgggcaggctggaacgagctgctgatcgcctccttctcccac
cgctccatagctgtgaaagatggtatcctccttgccactggcctgcacgtacaccggaac
agcgctcacagtgctggggtgggcgccatctttgacagggtgctgacagagctggtgtct
aagatgcgtgacatgcagatggacaagacggagctgggctgcctgcgagccattgtcctg
tttaaccctgactctaaggggctctccaaccctgctgaggtggaggcgctgagggagaag
gtgtatgcatcactagaagcatactgcaaacacaagtaccctgagcaaccgggcaggttt
gccaagctgctgctccgcctgcctgcactgcgttccatcgggctcaagtgcctggagcac
ctgttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatggagatgctg
gaggccccacatcaagccacctag
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