Mastomys coucha (southern multimammate mouse): 116096367
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Entry
116096367 CDS
T07224
Symbol
Podn
Name
(RefSeq) podocan
KO
K25037
podocan
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcoc00535
]
116096367 (Podn)
Proteoglycans [BR:
mcoc00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
116096367 (Podn)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
116096367
NCBI-ProteinID:
XP_031233975
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All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAGSRDLPLLLLVPQLFLGPVLLVRAPVFGRSDTPTLSPEENEFVEEEEQPVLVLSSEEP
EPGPATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPEELARL
QQLETLNLQNNRLTSRGLPEEAFEHLTSLNYLYLANNKLTLAPRFLPNALISVDFAANYL
TKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPA
LYKLHLKNNKLEKIPPGAFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNN
LSRVPAGLPRSLVLLHLEKNVIQSVDADVLTPIRSLEYLLLHSNQLQAKGIHPLAFQGLK
KLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLSYNRITSP
QMHRDAFRKLRLLRSLDLSGNRLQTLPPGLPKNVHVLKVKRNELAALARGALAGMAQLRE
LYLTANRLRSRALGPRAWVDLAGLQLLDIAGNQLTEIPEGLPPSLEYLYLQNNKISSVPA
NAFDSTPNLKGIFLRFNKLAVGSVVESAFRRLKHLQVLDIEGNFEFGNVSKDRGHKDEEE
EEEEEEEEEEEEEEERR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcagggacctgccactcctgctgctggtccctcagctcttcctgggccct
gtgctgcttgtgagggcacccgtgttcggccgaagtgacacacccaccctgagccctgag
gagaatgaatttgtggaggaagaggagcagccagtgctagtcctgagctctgaggagcca
gagcctggcccagccaccattgactgtcctcgagattgtgcctgctctcaggaaggtgtt
gtggactgtggtggcattgacctgcgtgagtttccaggcgacctgcctgagcacaccaac
catctctccttgcagaacaaccagctagagaagatctacccagaggagctggctcggctg
cagcagctggagacgctgaacttacagaacaaccgcctgacatcccgagggctcccagag
gaggcatttgagcatcttactagcctcaattacctgtacctggccaacaacaagctgaca
ctggcaccccgattcctgccaaatgccctgatcagtgtggacttcgctgccaattatctc
actaagatctacggactcacctttggccaaaagccaaatctgaggtctgtgtacctgcat
aacaacaagctggcagatgctgggctgccggacaacatgttcaacggctccagcaacgtc
gagatcctcatcctgtccagcaacttcctgcgccacgtgcccaagcacctgccacctgct
ctgtacaagctgcacctcaagaacaataagctagagaagatcccccctggggctttcagt
gagctgagcaacctaagggagctgtacctgcaaaacaactacctgactgatgagggcctg
gacaatgagactttctggaagctgtccagcctggaatacctggacttgtccagcaacaac
ctgtctagggtgccagcgggtcttccccgcagcctggttctgctgcatctggagaaaaat
gtcatccagagcgtagacgctgatgtgctgacgcccatccgcagcctggagtacctgctg
ctacacagcaaccagctgcaggccaagggcatccacccactggccttccagggcctcaag
aagctccacacagtgcatctatacaacaacgcgctggaacgtgtgcccagtggcctgccc
cgccgagtgcgcaccctgatgatcctgcacaaccagattacaggcataggccgtgaggac
ttcgccaccacctacttcctggaagagctcaacctcagctacaaccgcatcaccagccca
cagatgcaccgagatgccttccgcaagctacgcctgctgcgttcacttgacttgtctggc
aaccgcctgcaaacactgcccccaggcctgcctaaaaatgtacatgtgctcaaggtcaag
cgtaacgagctggctgctctggctcgaggggcactagctggcatggcccagcttcgggaa
ctctacctcacagccaaccgactgcgaagccgggccctggggccccgtgcctgggtggac
cttgctggtctgcagctgctggacattgctgggaatcagctcacagagatccctgagggg
cttcctccatcactggagtacctgtacctgcagaataacaagattagctccgttcctgcc
aacgcctttgactccactcccaacctcaaggggatctttcttaggttcaacaagctggct
gtgggctctgtggtggaaagtgccttccggaggctgaagcacctgcaggtcttagacatt
gaaggcaactttgagttcggtaacgtttccaaggaccgaggccacaaagatgaggaagag
gaagaagaagaggaggaggaggaggaggaggaggaggaagaggaaaggagataa
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