Mycobacterium cookii: MCOO_22650
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Entry
MCOO_22650 CDS
T07035
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MCOO_22650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoo03400
]
MCOO_22650
Enzymes [BR:
mcoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MCOO_22650
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MCOO_22650
DNA repair and recombination proteins [BR:
mcoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MCOO_22650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
BBX46250
UniProt:
A0A7I7KW30
LinkDB
All DBs
Position
complement(2450220..2451083)
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADYLRRHAVGRTVGRVDVAALSVLKTFDPPINALHGLTVTGADRWGKYLG
LHAGELTLITHLSRAGWLRWSEKLTAAPLKPGKGPIALRVHLGTPGESPGFDLTEAGTQK
RLAVWLVTDPKQVPGIAALGPDALQLSVDDLAGLLAGNTGRIKSVITDQKVIAGIGNAYS
DEILHVAKLSPFATAGKLSEGQLAGLHAAMNSVLSDAVSRSVGQQAATLKGEKRSGMRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTAGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactacccgaggtcgaagcgctggccgactaccttcgccggcacgctgtcggt
cggacggtcgggcgcgtcgacgtcgccgcgctgtcggtgctcaagactttcgatccgccg
atcaatgcgctgcacggtctgaccgtcaccggcgccgaccggtggggcaaatatctcggc
ctgcacgccggtgagctcaccctgatcactcacctgtcccgggccggctggctgcgctgg
tcggagaagttgactgcggccccgctgaaacccggcaaaggcccgatcgcgctgcgcgtc
cacctcggcactcccggcgaatcgccgggcttcgacctcaccgaggccggcacccagaag
cggctggcggtctggcttgtcaccgaccccaagcaggtgcccggcatcgccgccctgggg
ccggatgcgctgcaactcagcgtcgacgacctggccgggctgctggccggaaacaccggc
cggatcaagtccgtcatcaccgaccagaaagtgatcgccgggatcggcaacgcctacagc
gacgagatcctgcacgtcgccaagctgtcgccgttcgccaccgcgggaaaactgtcggag
ggccaactggccggactgcacgccgcgatgaactcggtactctccgatgcggtgtcgcga
tcggtgggccagcaggcggcgacgctgaagggcgagaagcgctccggaatgcgggtgcac
gcccgcaccggtctgccgtgcccggtgtgcggtgacacggtccgggaggtgtcgttcgcc
gacaagtcttttcagtactgccccacctgccagaccgcgggcaaggtgctggccgaccgg
cggatgtcgcgtctgctgaaatag
DBGET
integrated database retrieval system
