Mycobacterium cookii: MCOO_47340
Help
Entry
MCOO_47340 CDS
T07035
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
mcoo
Mycobacterium cookii
Pathway
mcoo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mcoo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MCOO_47340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
BBX48719
UniProt:
A0A7I7L3Z3
LinkDB
All DBs
Position
complement(5038803..5046023)
Genome browser
AA seq
2406 aa
AA seq
DB search
MEPLALFDLLSPYFLAGVDLGPTFHELLSTVHVDQLDTCFDEEGVAVWGIARLDPSAATS
SFSLTPNGASISGSGSTGGINSPSSASSNSVWDWHDVTFQFRITAPRSPSSLIASAMSAL
SGVPKVQSTLPPLFDTWGSSTAAPSDYPNVQFQLDLLLTVATVHLPFLTGAKLDPNGLLE
ADPANKNVKLVLPKILVTLTQDGTLGQLDFVIDSWGAATIDDPDDTGEAQLIQMLPPYAL
VDDAGHFGFGFDKAVLDLSDSHTPPELLSQFGVGDDWQGIYLPDLRIFVAPSGAQGLAVD
VSAHDLLIGVGKSSGVSGDFELDVINENTKPHIQVIVYDAQNNTIAEDQQNGVIKVVLPQ
NCTLVVDVRQAVPPYKITVDGTDITSNQTFPITGFTAKHDYAVVVTDSATPPNITNLTVS
AVPQATSGNPLPVPPTGQSGMALALTGGATDGIHTITLTNAQQGTVQFAPYVEGIQVSVD
NQNGGAPQTLTSDTITITANTVDTVNISATWPGTASNNKVELKAWFHFDHPPKPTTPQAP
PAGLQNTPSAYGVPNTGDVAPTDHIEVSDEEDVTRTTTSVPFTAPLVASSDLNQFIQGMA
DNTPTEVEIDGFASFEHNATDEQNATPPSYNDDLSSRRAVALAEIIQAAVQGTAKQPQIT
IVAKGNYHDDAVLPGGVSAQTAWGSGTSPDSQYVYADYWLAHAVYNSTQPGPSATVTAKV
TGPPAVTPTPSPSQPTLQKPPNADQNRPAFFRSIKIIVRIAQSTFIALEISGEFQFSTAA
QQGLQSAAQKASYDSGGDHSMTVKNLQPGNPNPADGTTDFDLIISHDDSTNTWTEQLTIA
AAKNDKDGLMRWGDPVTDDSTDPEVNRFRDFMGTLLVFSPLLQDVAAATASMASWKEGLL
DGAALVAAAAISQIGVLHAETITLYGGELLAQEGSAGGEAAVFLDVETDLYVDLLGIITT
KPSKPIKVRYKAVGVKIVWGAGPGNTLMPIVFDASKGYSIDVTDPGTFHLPAGLADIIQV
LGASIARTNPLNLEVDVGIKADLGIVSVDRAKVRWPLDPLGVPTISALGASVNIPGAFKG
SGYLNIGNGGIAGSIDVTIVPISLRAKAEFNIQQTPPDGSGNTATGVAISLEVDFPAPIV
LGSSGLGIYGLIALFAMHFGRTVDDPMTWYLQVKGDPTDVANAHSNGWQAEIGHWAFGAG
AVLGTMDGGFVMNLKGILVLELPGPRILLFMNANVLVPSLPGLLGDATGTILATLDLDIG
RGTLTIGLQVNYNLSPFFAISIPADAFFDFTDPTNFYLDLGSIAKPATVSVINSFTGSGY
LEIHGHGIPDFPGFNLPTHALSGFAIAMGIDVALIWGNTSVNLYLEIGATAAVGIGFSPF
LLAGSITISGQLHLFIVSVSASGNLAVTSDGTAANTTITGKICGSVSFLFFSVSGCVGFT
LGPGPVTPPAPPLVNALFLQSRSPALVQGTGVDRPIDAKLADGGTDPNNLPKDSNGNIVT
VPIDSIPVLKFAFSPQLDPAFTSFTQSPGNAPTLPSGGWCKRGENLYRYTIQSISLAQVS
GPGPMLLNDAAGVPSVWRPNAAANGGDDRAIDLALLDWTPFATPQAVVAGSALTTTVTTT
WSSVCDPAAPATSVFWCFNRANVGTSPDGWTLQGTAWPDPPDTVRSAPPPLTLKVNELWR
TRVELIDSLLSMEPAYVFELALPCISPRRTQKPVQTPERAGLLNTEHPTLRNPVVQNEIL
RRLPQTAQFASLSHAADLAGRDSAIHTLVGTADAQRMATRSLAETLARLQPSEARWACSG
RALAAPFASDLPRLNAEFDLLTKALSPLAKNNEDLADALHFYGNPLVRVRLFLWVTVELI
RSRTLVLRALDPNGKGISDTVINEAIVHAYTDLPSTWYEPGGVWSNDALLDWEFLTVYGV
VESEDAPDYYGLNIVATVDLPAGTDSFLLGILEKENSVPAALPPPYVVASIEGWSVAEVE
RETFDSNTQVQNQQTVAGALNGDPAKLPLLEPGSIYGITVNYTAESATDDGNGNPAHPTS
PVAASQALYFETDSTPPVSLAPWVLCVWPGNDEPHFFYSEPITVVFATDAVEQLLTAYGE
TLQGHARAATFRPPASAPPNQQPIQKLFPLTPVDGVVLTPWEDAIRALLNSGAAPCINAS
GTSVRHGKQVFDFPLDGMTPYIFDLESDPAPPVPTTNWQPGDPPPPPVNPLYRTAFATSR
YASLDEMIADINGTNTGYRHLTAGASAQLSALSANPTDAEMQAALQAAGLGALPLPKQPQ
VTVFWEDSPSTPVPVGVLLETPEPIRRSRQTPTPIMDSSTPPVITEWQMQPAVWLDLIET
AGTLSATIAANTSGNRTYVALKNGARGNTLHLSIRRFCKAPIDTTDSQHDTALLDIALNQ
APWEDL
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgctagcactgttcgacctgttgagtccctactttctggccggggttgacctc
ggtccgaccttccatgagctcctgtcgactgtccatgtcgaccaattggatacgtgcttc
gacgaagagggcgttgcggtttggggaatcgcccggctggatccctccgcggcaacgtcg
tcgttttcgctgacgccgaacggagccagtatctccggcagcggcagcaccggtggaatt
aactccccttcatccgcatcgagcaattcggtctgggactggcatgacgtcacattccag
ttccgcatcaccgcgccgcgctcgccgtcctcgttgatcgcgtcagcgatgagtgcgctg
tccggcgtaccgaaagtgcaatcgacgcttcctccgctgttcgatacctggggcagcagc
accgcggcgccgtccgattatccgaacgtgcagttccagctcgatctgctgttgaccgtc
gcgaccgtgcacctaccgttcctcaccggcgcgaagctcgatcccaacggacttctcgag
gcagacccggctaataagaacgtcaagctcgtcctgccgaagatccttgtcaccctgacc
caggacggcaccttgggccagctcgatttcgtcatcgattcgtggggtgccgcaaccatt
gatgacccggacgacaccggcgaagcgcagctcatccagatgctgcccccctatgcactg
gtggatgacgcgggccacttcgggtttggcttcgacaaggcggttcttgacctcagcgac
agccacacgccgcccgagctgctgtcgcagtttggtgtgggagacgactggcagggcatc
tatcttcccgatttgcgaatattcgtcgcgcccagcggcgctcaagggcttgcggtggac
gtctccgcccacgatctgttgatcggagtcggcaaaagctcaggtgtatcaggtgatttc
gaactcgacgtcatcaacgagaacaccaagccgcacatacaggtcatcgtctacgacgcg
cagaacaacactattgcggaagaccagcagaacggtgtgatcaaggttgtcttgccgcag
aactgcactctggtggtcgacgtccgccaagctgttccgccctacaaaattacggtggat
ggaaccgacatcacgtcgaaccaaacgtttccaatcaccgggttcacggcaaagcacgac
tatgcagtcgtggtgactgattcggccaccccaccgaacatcaccaacctcactgtaagt
gcagtcccacaagccaccagcgggaatcccctgcctgtgccgccgaccgggcagtccgga
atggccctcgccctgaccgggggcgccaccgacggcatccacaccatcacgttgaccaac
gcgcagcaggggacggtgcagttcgcaccctatgtcgaggggattcaggtcagcgtcgac
aaccagaacggcggcgcaccgcagaccctcacctccgacaccatcacgataactgcgaac
accgttgacactgttaatatttcagccacctggcccgggactgccagcaacaacaaagtc
gaactcaaagcctggttccacttcgatcatccgccgaagcccaccacgccacaggcgccg
ccggccggattgcaaaacacgccttccgcctacggtgtgccgaataccggcgatgtagcg
ccgacggatcacatcgaggtctctgacgaagaagacgtcacgcgcacaacgacttccgtc
ccgtttaccgcgccgctggtcgccagcagcgacctgaatcagttcatccagggcatggcc
gacaacacgcccaccgaagtagagattgacgggttcgcgagcttcgagcacaacgcaact
gacgagcagaacgcaacgccgcccagttacaacgacgatctctcgtcgcgccgtgcggtc
gctctggcagaaatcattcaggcagcggtgcagggtacggcgaaacaaccgcagatcacg
attgttgcaaagggcaattaccacgacgatgcggtactgcccggaggtgtttccgcgcaa
accgcttggggctcaggtacatcccctgactcgcagtatgtgtacgccgattactggctg
gcgcatgcggtctacaacagcacgcagcccgggcccagcgcgacagtaacggctaaagtg
accggccctcctgccgtcactcccactcccagcccatcgcagcccacgcttcagaaaccc
ccgaacgcagaccagaatcggccggcctttttccgttccatcaagatcatcgttcgcatc
gcgcagagcactttcattgcgctcgagatttccggtgaattccagttcagcaccgccgct
cagcagggcctgcaaagcgcagcgcagaaggcttcgtacgattccggcggcgatcattcg
atgacggtgaagaacctgcagcccggaaaccccaacccggcggacgggaccaccgatttc
gacctgatcatctcccacgacgattcaaccaacacctggaccgagcaactcaccatcgcg
gccgcgaagaacgacaaggacggcctgatgcgctggggcgatccggtgaccgacgattcc
accgatcctgaagtaaaccgcttccgcgatttcatgggcaccctgctggtcttttccccg
ttgctgcaagatgtcgccgctgccaccgcgagcatggccagctggaaggaaggcctgctc
gacggcgcggctctcgttgccgcagcggcaatttcgcagatcggcgtcctacacgccgag
accatcacgctctacggcggtgagctgctggctcaggaagggagcgcgggcggtgaggcc
gcggtcttcctggatgttgaaacggacctttatgtggacctgctcggcatcatcaccacc
aagccgagcaagccgatcaaggttcgctacaaggcggtgggcgtcaagatcgtctggggc
gcgggccctggaaacacactgatgcccatcgttttcgatgcgagcaagggctactcgatt
gatgtcaccgatcccggaacgttccatctgcccgccgggctcgcggacatcatccaagtg
ctcggtgccagcattgcccgcaccaacccgctcaacctcgaagtggacgtcggcatcaag
gccgacctgggcatcgtcagtgtggaccgcgcgaaggtgcgctggccactggatccgctt
ggggtgccgacgatctccgcgctcggcgcgtcggtcaacattccgggcgcgttcaaggga
tcggggtatctgaacatcggcaacggcggtatcgccggctcgatcgatgtcaccatcgtc
cccatcagccttcgcgcgaaggccgagttcaacatccagcagaccccacctgacggctcc
ggcaataccgcgacaggcgttgccatttcgctggaagtcgatttccccgcaccgatcgtg
ctgggcagttcagggctcggcatttatggactgattgcgctcttcgcgatgcacttcggg
cgcactgtggacgaccccatgacctggtacctgcaagtcaagggcgaccccaccgacgtt
gcgaacgcccacagcaacggctggcaagcagaaatcggtcactgggccttcggcgccggc
gctgtcctgggcaccatggatggcggctttgtgatgaacctcaagggcatcctggtgctc
gaactgccggggccgcgcatcttgttgttcatgaacgcaaacgttctggtgccgtcgcta
cccgggcttctcggcgacgccaccggaaccatcctggcgacgctcgatcttgatatcgga
cgcggcaccctgaccatcggcctgcaggtcaactacaacctcagcccgttctttgccatc
tcaattcctgcagacgcattcttcgacttcaccgacccgacgaacttctatctcgatctg
ggcagcatcgcgaaacccgcgactgtttcggtcatcaactcgttcaccggctctgggtat
ctcgaaatccatgggcacggaatcccagattttccgggcttcaatctcccgacgcacgcg
ctgtcgggttttgccatcgcgatgggcatcgatgtcgcgctcatctggggcaacaccagc
gtcaacctgtatctcgaaattggcgccactgcggccgtcggcatcggcttctcaccgttt
ctgctggccggttccatcaccatcagcggacaacttcacctattcatcgtgtccgtctcc
gccagcggaaatctcgcagttaccagcgacggcaccgccgcaaacaccacgatcaccggg
aagatctgtggcagcgtctcattcctgttcttcagtgtttcgggctgcgtcggatttacg
ctcggacccggaccagtgacgccgcccgcgccgccgttggtcaacgcgctgttcttgcaa
agccgttcgcctgctctggtgcagggcaccggggtggaccgtccaatcgatgccaagctg
gccgatgggggtacggatccgaacaacctgcccaaggacagcaacggcaacatcgtcacg
gtgccgattgattcaattccggtgctgaagttcgccttctcccctcagctcgatcccgcg
ttcaccagcttcacgcaatctcccggtaatgcgccgacgctgccgagcggcggctggtgc
aagcgtggtgagaacctctaccgctacaccatccaaagcatctctctggcacaggtttcc
ggccccggaccgatgctgctgaatgacgccgcgggagtgccctccgtgtggcgaccgaac
gcggcggcaaacggcggcgatgaccgcgccatcgacctcgctctactcgactggacccca
ttcgccacaccgcaggccgtcgtcgcggggagcgcactgacgaccaccgtgaccacgacg
tggagctctgtctgtgatccagctgcgcctgcgacatcggtcttctggtgcttcaatcgc
gcgaatgtagggacgtcgccggacggctggacgcttcagggcacagcttggcccgacccg
ccggacacggtgcgctccgcgccgcccccgttgacgctcaaggtaaatgagctatggcgc
accagagtcgaactcatcgattcgttgctgtccatggaacccgcttacgtgttcgagctg
gcgctgccatgcatctcaccaaggcgcacccaaaagcccgtccaaacacccgagcgggct
ggactgctcaacaccgagcatccgaccctgcgcaatccggttgtccagaacgagatcctg
cggcgcctgccacaaaccgcacagttcgcgtcgctgtcacacgctgccgatctggcagga
cgcgactccgccatccacactcttgtcggcaccgccgatgcacagcggatggcgacccgc
agtctggcggagacgcttgcacggctgcagccgtccgaggctcgctgggcgtgcagcggg
cgcgcgctggcagccccgttcgcttcggacctgccccgtctcaacgcggagttcgacctg
ctcaccaaggcgttgagcccactcgcgaagaacaacgaggatttggccgatgcgctgcac
ttctacggcaatccgctggtgcgggtacgcctgttcctctgggtcacagtggaattgatc
cggtcgagaactctggtgctgcgcgcgctcgatccgaacggcaaggggatttcggatacg
gtcatcaatgaagcgatagttcacgcctacaccgacctaccgagcacctggtacgagccg
ggaggggtctggagcaatgacgcccttttggactgggagttcctgacggtctacggcgtt
gtcgaatccgaagacgcaccggactactacggtttgaacatagtcgcgacggtcgacctt
cccgctgggacagactcctttctgctgggcattctcgagaaggaaaattcggtaccagcc
gcgttgccgccgccctatgtggtggcgtccatcgaaggctggagcgtcgccgaagttgag
cgcgaaaccttcgattcgaacacccaagtgcagaaccagcagaccgttgccggtgcgctc
aacggcgaccctgccaagttgccactgctcgagccaggctcgatctacggcatcacggtc
aactacacggcagaatcggcaaccgacgacggcaacggtaatccggcacacccgactagt
ccggtcgcggcatcgcaggcgctctacttcgaaaccgacagcacgccgccggtttccctg
gcgccctgggtgttgtgcgtctggcccggcaacgacgagccgcatttcttctactccgaa
ccgatcaccgtggtcttcgcgaccgacgcggtcgagcagctgctgaccgcctacggcgag
acgctgcaaggccacgcgcgcgcggcaaccttccgcccgccggccagcgccccgccgaac
cagcagccgattcagaagctgttccctctgactccggtggacggcgtcgtcctgacgcca
tgggaggacgccatccgggccctgctgaacagcggtgcagcgccttgtatcaacgccagc
ggcacctcagtgcggcatggcaaacaggtattcgatttccccctcgacggcatgacgccc
tacatcttcgatctcgaaagcgatcccgcaccgcccgtgccaacaacaaactggcagccc
ggcgatcctccgccaccgccggtgaacccgttgtaccgcaccgccttcgcaacgtctcgt
tatgcctcgctggacgagatgatcgccgacatcaacggaaccaatacgggctaccgtcat
ctcaccgcgggcgcgtccgcgcaattgtcggcgctctcggcgaatccaacggacgccgaa
atgcaggccgctctccaggccgccggcctgggcgctctgcctcttcccaagcagccacaa
gtcacggtcttctgggaggattcccccagcacacccgttcccgtcggtgtgctcctcgag
acgcccgagcccatccggcgcagccggcagacgccgacacccatcatggactcgagcact
ccccccgtcatcaccgaatggcaaatgcaacccgctgtctggctcgacctaatcgaaact
gccggcacactcagcgccaccatcgccgcgaacaccagcggcaatcggacctatgtcgcg
ctcaagaacggggcgcggggcaatacgctgcacctctcgatacggcggttttgcaaggcg
ccgattgatacaaccgacagccagcacgacactgcgctgctggacattgcgctcaatcag
gcgccgtgggaggacctatga
DBGET
integrated database retrieval system
