Mycobacterium canettii CIPT 140070010: BN42_20757
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Entry
BN42_20757 CDS
T02421
Name
(GenBank) Putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mcx
Mycobacterium canettii CIPT 140070010
Pathway
mcx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN42_20757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcx03400
]
BN42_20757
Enzymes [BR:
mcx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BN42_20757
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN42_20757
DNA repair and recombination proteins [BR:
mcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN42_20757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
zf-TFIIB
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CCK58986
LinkDB
All DBs
Position
1094346..1095209
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRHAVGMTVGRVDVGALSALKTFDPPVDALYGQTVAGADRWGKYLG
LSTGRLWLITHLSRAGWLRWSDKLTAVPLRPGKGPIALRVHLGVPGTAPGFDLTEAGTQK
RLAVWLVDDPKRVPGIAVLGPDALDVSTDDLAGLLAGNTGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLSGAQLTCLHEAMASVLSDAVRRSVGQGAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKALADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgagatcgaagcgctggcagatcatttgcgccggcacgccgtcggt
atgacggtgggccgtgtcgatgtcggcgcgctgtccgcgctgaaaaccttcgacccgccg
gtggacgcgctgtacggccagacggtggcgggggccgatcggtggggtaaatacctcggc
ctgtcgaccgggcggctgtggttgatcacccacctgtcccgggcgggctggttgcgctgg
tccgacaagctgaccgcggtgccgctgcgccccggcaaggggcccatcgcgctgcgcgtc
cacctgggcgtcccgggcaccgcgccgggtttcgacctcaccgaggcaggaacccagaaa
cggctggcggtgtggctggtcgacgatccgaagcgggtgcccggcattgccgtgctcggg
cccgatgcgctggacgtcagcaccgacgacctggccgggctgttggccggcaacaccggc
cggatcaagaccgtcatcaccgaccagaaggtgatcgccggcatcggcaacgcctatagt
gacgaaatcctgcacgtcgcgaagatctcgccgttcgccacggccggcaagttatccggc
gcacagctcacctgcctgcatgaggcgatggcgtcggtgctgtcggacgcggtgcgccgg
tccgtcggccagggcgcggccatgctcaaaggggagaaacgttctgggcttcgagtacat
gcgcgcaccgggttaccctgcccggtgtgcggtgacaccgtgcgggaggtgtccttcgcg
gacaagtcttttcagtactgtccaacgtgtcagaccggtggcaaggcgctggccgaccgg
cgtatgtcgcggctgctcaagtag
DBGET
integrated database retrieval system
