Musca domestica (house fly): 101887360
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Entry
101887360 CDS
T03448
Name
(RefSeq) collagen alpha-1(XXII) chain-like isoform X1
KO
K08131
collagen type IX alpha
Organism
mde
Musca domestica (house fly)
Pathway
mde04512
ECM-receptor interaction
mde04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101887360
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101887360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mde00535
]
101887360
Proteoglycans [BR:
mde00535
]
Extracellular matrix (ECM) proteoglycans
Others
101887360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101887360
NCBI-ProteinID:
XP_058985025
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MSSQLKRILVLLFACQILQNAVAVGQGVHNGHDYYDEDEDGDFVPVEPCNVVRPGDPDLT
TYDILHSYRFDEYQYEAQGVTQIGGSTGYQQAYHISEYSNMTIESSRAFPKGIPNEFSFE
CTFRVPQQQPRYEWYLFELSDYEYESLMSVTINPGINAIEFSLPKFDGSLQTVTFEEIEI
FDRSWHKVMLGVSQDGVRLWVDCKPVPDNRGSFKAPLDVRGPIDATDGAFTVARTCSSKE
TVPIDLQWMIFSCDKDKPATTTCDDLPQYIQTNTSRPHYEWPKPKPETTTTTNRYRPDNI
ESSTTPREPFNIGYLDTTTEKFWNIDSTPTYSFHGKEVITCPEQCPSGPPGLPGPPGLRG
LPGAPGPAGIPGNPAPSIGTYGQVAGVKGEKGEAGLPGMWGLKGERGDNGLPGAPGMKGI
AGLPGPQGPPGFGVQGPPGESGEKGDKGDRGLPGPPGPPGVVSPQDGQLGLAVQGPPGEP
GTPGEKGERGLPGLDGADGRPGPPGPPGPPGPASIHNEAGWETKTGPMGPPGMPGAPGQP
GQPGPQGMPGTPGLPGQPADNFNYNFDEGRIRDICMAVVRDYISEISHNLMGPPGPPGRR
GVSRPGPPGPQGIQGEPGPRGPQGERGYPGLNGHPGAPGEMGPPGRDGEKGDRGYPGEGR
EGPMGPPGAPGPAGVGIDGAPGRPGERGDTGKPGEPGTRGPPGQPGSCPDCSSYMAAYTY
PLQLAQQQWSNKGPQNNKGPQNYYNKGPNY
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccaattgaaaagaatattggttctattatttgcttgtcaaatattgcaaaat
gccgttgcagtgggacaaggtgttcacaatggccacgattactacgacgaagatgaggat
ggcgattttgtgcccgttgaaccgtgcaacgttgttcgacccggcgatcccgatctaacc
acctacgacattctccactcctatcgtttcgatgagtatcaatacgaggcccagggcgtg
acacaaatcggcggttcgacaggctatcagcaggcctatcacatcagtgaatattcaaat
atgaccatcgaatcgtcacgagcctttcccaagggtatacccaatgagttctcgttcgag
tgtactttccgagtgccacagcaacagccccgctacgaatggtatctgttcgagttgagc
gactacgaatatgaatcgctaatgagtgtgaccataaatccgggaataaatgcgattgaa
ttttcattgccaaaatttgatggttcactgcagacggtgacgtttgaggaaatcgagatt
tttgatcgttcttggcataaggtcatgttgggtgtcagtcaggatggtgtacgtctgtgg
gtggattgcaaacctgtgccggataatcgtggcagtttcaaggcccccttggatgttagg
ggtcccattgatgccaccgatggtgcctttactgtggcccgcacctgctccagcaaggaa
acagttccgatcgacttacaatggatgatatttagctgtgacaaagacaaaccggccaca
acaacctgcgacgacctacctcaatacattcaaaccaacaccagtcgccctcattacgaa
tggccaaaaccaaaaccagaaacaacaaccaccacaaatcgttataggcccgataatatt
gaaagctccacaacgcctcgggaaccttttaatatcggatatttagatacaacaacagag
aaattctggaacattgatagtaccccaacgtattcgttccatggcaaggaagtcataaca
tgtcccgaacagtgtccaagtggtccacccggcctaccgggaccaccaggtctcaggggt
ttgcccggagctccgggtccagctggtattcccggaaatccagctccctcaattggtaca
tacggccaggtggctggtgtaaagggtgagaagggtgaagcgggcctgccgggcatgtgg
ggattgaagggtgaaagaggagacaatggtctgcctggtgccccaggcatgaagggcatt
gctggtctgccaggtccgcagggaccacccggttttggcgtacaaggtccccccggtgaa
tccggtgaaaaaggagacaaaggtgacagaggtttgcctggtccacccggtccgcccgga
gttgtctccccccaagatggacaattgggattggcagttcaaggtcctcctggtgaacct
ggcacacctggagaaaagggcgaaagaggtctacccggcttagatggtgccgatggacgt
cctggaccccctggtccacctggccctcctggaccagcctcaatacataacgaagctggt
tgggaaactaagactggtcccatgggaccacctggtatgcccggagcaccaggtcaacct
ggtcaaccgggccctcaaggtatgcctggaacgcccggtcttcctggccaaccggctgat
aattttaattacaattttgatgagggacgcattcgtgatatttgcatggctgtggtgcgg
gattatatcagtgaaatttcacacaaccttatgggaccacctggtccacccggacgcagg
ggtgtaagtcgtccaggaccacctggacctcagggcatacagggtgaacctggtcctcga
ggcccacaaggtgagcgtggttatcctggcctaaatggccacccgggggcacctggagaa
atgggcccacccggacgtgatggcgaaaaaggtgatcgtggttatcccggtgagggtcgt
gagggacccatgggaccacctggagccccaggtcctgctggagtgggtattgatggcgct
cccggcagacccggtgaacgtggtgacactggtaaaccaggtgaacccggtactcgtgga
cctcctggccagcctggcagttgtccagattgtagttcatacatggcagcctatacttat
cctctgcaattggcccaacagcaatggagcaataagggaccgcaaaataacaaaggaccc
caaaattactacaacaagggaccgaattattga
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