Musca domestica (house fly): 101889444
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Entry
101889444 CDS
T03448
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
mde
Musca domestica (house fly)
Brite
KEGG Orthology (KO) [BR:
mde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mde04147
]
101889444
00535 Proteoglycans [BR:
mde00535
]
101889444
00536 Glycosaminoglycan binding proteins [BR:
mde00536
]
101889444
Exosome [BR:
mde04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101889444
Proteoglycans [BR:
mde00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101889444
Glycosaminoglycan binding proteins [BR:
mde00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101889444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Motif
Other DBs
NCBI-GeneID:
101889444
NCBI-ProteinID:
XP_058980471
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MQIMCSWRKMFSLLLIVLTVGRTQTIELTGQAIKDAIAEYDLLAMINENLNGIEFDYAED
GFPAYKILQIADIKSPYRMILPEKLNAFAIQTTFQTTSPKGGYLFSVVDPLDTVVQFGVH
FSPVIKDSWNVSLLYTDSNISPISKRLVTYQLPYEPKKWIKLAFKVMSDKVVFYYNCEER
ETTSIVRDPLELVFASSSTLYLAQAGPKLGGNMEGFLQKLNVYGNPEALSITCIPQPKET
DFLSQDYNDVDFSNLASRKPNRGFKFPSLEEASGDYSDYFSWDKATSIYDGSGMPPQQTQ
YQHERPYRTIKGEKGDRGPKGPPGDSIRGPPGPPGPAGPKGEPGSFPPFIDFASNPEAKY
TGKCTCNASDILEAIKENDLLRETIRGPPGLPGKEGKTGAPGRTVTITEKGATGVPGERG
APGPKGDRGDRGDPGPRGPEGLQGQKGEPGVDGMPGVVGPPGPPGPPGLPENYDESLMGN
SMGSLRSSSPGPKGEPGIKGEIGRPGERGQPGQKGERGDPGMSGEKGDRGHTGPHGPAGA
KGEPGQPGIPGISGSPGAPGLKGDRGLPGEIGPLGPPGPPGQIVYADTPYGLQNTTQCTC
PAGPPGPMGPRGPAGYDGAPGLNGEPGPAGSIGLTGLPGSKGDKGEKGLRGLTGPKGDRG
PEGPPGQAFFAGGFEGMAMNGTKGEKGDKGMRGRRGKPGTAGPIGPPGKPGIMGEMGHAG
RPGVPGPKGDLGPKGAKGEPGGREGPKGEKGDRGTDGRDGKPGPPGLPAASGEGVQYVPM
PGPPGPPGPPGPPGLPGLSISGPKGEPGVDSRSGYYGDASYYGRPGPPGPPGPPGSSAGS
SSSRHHDREEDEETPYFSASSWNMRIVPGAVTFPNIDEMTKRSAMNPPGTLAYITEEEAL
LVRVNKGWQYIALGTLVPIATPPPPTTMAPPVRVDIQSSNLLNNLPPLLNTPTFTTAPEY
ETWYPRMLRIAALNEPYIGDLQGIRGADFACYRQGRRAGLLGTFKAFLSSRVQNLDSIVR
VADRDLPVVNTRGDVLFNSWKGIFNGQGGFFSQAPRIYSFSGKNVLTDPLWPQKHVWHGA
LPNGERSIDTYCDAWHSGARDKIGYASNLLGNKLLDQERLTCDSKLIVLCVEALSQDRRK
KRDLSDSDQEFYTAEEYEEHLRSVLT
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcatgtgttcttggcggaaaatgttttcgcttctattaattgtccttaccgtg
ggaaggacgcagacaattgaattaactggccaagctatcaaagatgccattgccgaatac
gatttactggccatgattaatgaaaatttaaatggcattgaatttgattatgccgaggat
ggttttccagcttacaaaattttgcaaattgctgatataaaatcaccctatcgtatgatc
ctacccgaaaaactaaacgcttttgccatacagacgacatttcagacaacatcacctaag
ggtggttatctattcagtgtcgtggatcctctagatacagttgtgcaatttggtgtgcac
ttttctccggtcatcaaagattcatggaacgtatcactactgtacacagattcaaatatc
agtccgattagcaaacgtttggtcacctatcagttgccatatgaaccaaagaaatggata
aaattggcatttaaagttatgagcgacaaggtggtattctattacaattgcgaagagagg
gagacgacatcgattgtaagagatccattggaattggtatttgcctcatcatccactttg
tatttggctcaagctgggccgaaattgggtggcaacatggagggatttttacaaaaactc
aatgtttatggtaacccagaagctttatccataacttgtatacctcagcccaaggaaacg
gactttttatcacaagattataatgatgttgattttagtaacttagcttcgagaaaacca
aatcggggttttaagtttcccagtttagaagaagcatccggtgattattcagattatttt
agttgggacaaagcgacaagcatatacgatggcagtggtatgccgccacagcaaacgcaa
tatcaacatgaaagaccttatcgtactataaaaggtgaaaaaggtgatcgtggacccaag
ggaccacctggtgatagcatacgtggtcccccgggaccaccaggtcctgctggtcctaag
ggtgaaccaggatcatttccgccttttatcgattttgcgagtaatccggaagcgaaatac
actggcaaatgtacatgtaatgcgtctgatatcctagaagctatcaaagaaaacgatttg
ctgcgcgaaactatacgagggccaccaggactaccgggtaaagagggtaaaactggagct
cctggacgaacggttacaataaccgaaaagggtgctactggggtgccaggtgaacgcggt
gcccccggtcccaaaggtgaccgcggcgataggggcgatcctggtcctcgtggtcccgaa
ggtctacagggtcagaagggtgaaccaggtgtcgacggtatgcctggtgttgtgggtcct
cctggaccgccaggaccacctggtttgccggagaattatgatgaatcgttaatgggcaac
tcaatgggatcattacgcagcagttcacctggacccaagggcgaaccaggcattaaaggt
gaaattggtcgaccaggtgaaagaggtcaaccggggcagaaaggtgaacgtggagaccca
ggaatgagtggtgaaaaaggcgataggggtcataccggaccacatggtcctgctggagct
aaaggcgaaccaggacagccgggtatacccggcattagcggctctcccggagctcctggc
ttgaaaggcgatcgtggtctacccggcgagattggcccactggggccacccggaccacca
ggacaaattgtttatgcggatacaccatatggattacaaaatacgacacagtgtacttgc
ccggctggtccgcctggtccaatgggtccacgaggtcctgctggctatgatggtgcaccc
ggtttgaacggtgagcctggtccagctggatcaatcggtttgaccggcctgcctggcagt
aagggcgacaaaggcgaaaaaggtttgcgtggcttgactggaccgaaaggtgatcgagga
ccagaaggtccgcctggacaggcctttttcgctggtggtttcgaaggcatggcaatgaat
ggcaccaagggtgaaaagggtgataaaggtatgcgtggtcgtcgcggcaaaccgggaaca
gctggaccaatcggacctccgggcaaaccaggtattatgggcgaaatgggacatgcggga
cgacccggagtacccggaccgaaaggtgatttggggccgaaaggagccaaaggcgaacca
ggcggacgagaaggtcctaaaggagaaaaaggagatcgtggtaccgatggtcgtgatggc
aagcctggtccaccaggtttacccgcagcatctggagaaggtgtacaatatgttcctatg
ccaggaccacctggtcctcccggccctcctggaccacccggcctgccgggactttcaata
tctggaccaaaaggtgaacccggcgtcgattctagaagtggctattatggtgatgcttca
tattatggtcgaccaggaccaccaggcccacccggaccacctggctcgtcagccggtagc
agttccagccgccatcacgatcgtgaagaggatgaggaaacaccttatttttctgcatct
tcttggaatatgcgtatcgttcctggagctgttacctttcccaacattgatgaaatgaca
aagagatctgccatgaatccaccgggcactttggcttacattaccgaagaggaagctttg
ttggtccgagtcaataaaggctggcagtatatagcgcttggcacattggtacccattgca
acgccacccccaccgaccactatggcacctccggtgcgtgtggatatacaatcttccaat
ttattaaataatttaccacctctactcaatacaccaacgtttactacggctccagaatat
gaaacgtggtatccacgaatgttaagaattgctgccttgaatgagccatacattggtgat
ctacaaggtatacgaggagctgattttgcctgttatcgtcaaggtagaagggcaggtctt
ttgggcacatttaaggctttcctatcctcgagggttcaaaatctagattcaattgtacgt
gtcgcagaccgtgatctgccggtggtgaatacaagaggtgatgtcctctttaattcgtgg
aagggcatatttaatggccagggaggtttcttttcgcaagcgccacgtatctacagtttt
agcggcaaaaacgttctgacagatcccttatggccacaaaaacatgtctggcatggcgct
ttacccaatggcgaacgttcgattgacacatattgtgatgcctggcatagtggagcaaga
gacaaaattggctatgccagcaatttgttgggaaacaaattattggatcaggagcgacta
acgtgcgatagcaaattaatagtactttgtgtagaagcactttcgcaggatcgacggaaa
aaacgagatttgagtgacagcgatcaagaattttacacggctgaggagtacgaagaacat
ctaagaagtgtactgacttga
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integrated database retrieval system
