Metabacillus dongyingensis: K8L98_18230
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Entry
K8L98_18230 CDS
T07997
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mdg
Metabacillus dongyingensis
Pathway
mdg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8L98_18230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdg03400
]
K8L98_18230
Enzymes [BR:
mdg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K8L98_18230
DNA repair and recombination proteins [BR:
mdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8L98_18230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_18
AAA_22
AAA_12
nSTAND3
AAA
AAA_16
T2SSE
NTPase_1
HHH
AAA_17
AAA_28
DUF4926
Rad17
Mg_chelatase
AAA_29
UvrD_C
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UAL51141
LinkDB
All DBs
Position
complement(3665805..3668180)
Genome browser
AA seq
791 aa
AA seq
DB search
MQQKADLFQEQERFLKGKIITVIYQNDQNHYTVLKTEVLETSENYDQKEITVTGYFPLLH
EDETYTFFGMLTQHPKFGQQFQAEHYRKEIPKTRDGVIQYLSSDLFKGIGRKTAEAIVDV
LGEGAISKMMEDPSVLDKVPKLGKDKAKQLLDQLKEHQGLEQAMISLNQLGFGPQLSMKI
YQAYQERTIQVIQENPFQLVKDIEGIGFVRADELGGQMGLGGNHPERIKAACFYTIEHLC
LQEGHTYVSLEQLIIKSMELLNSSKSSGIIETDISEQVIKLAEDKGIIIEEDRAYLPSLF
FAEQGLVKSIQRVLLQTEYESIFPESEFLLSLGKLEERMKVQYAPTQKEAIQTALMSPML
LLTGGPGTGKTTVIKGIVELYADLHGCSLEQKDYKKEEPFPISLVAPTGRAAKRMTEATG
LPAVTIHRLLKWNGAEGFDHGEDNPIGAKLLIVDEMSMVDTWIANQLFKALPEHIQVIMV
GDEDQLPSVGPGQVLRDLLESEAVPVVRLTDIYRQAEGSSIIELAHDIKKGRLPDNLAAP
TKDRSFIRCSGAQVKEVVEKVISNAIKKGYTARDVQVLAPMYRGPAGIDQLNIMLQQLFN
PKAENKREMKFGETVYRSGDKVLQLVNQPESNVYNGDIGEIVSIFYAKENTEKEDMIVIS
FDGNEVTYTKSDFNQFTHAFCCSIHKSQGSEFPIVVVPVVKSYYRMLRRNLIYTAITRSK
QFLILCGEQDALLRGIENRDHLSRQTSLKMKLSEKQHMIEELTEELPFDLADAMIGMEGI
TPYDFMEDNKI
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcaaaaggcggacctgtttcaagagcaggaacggtttttaaaaggaaagatcatc
acggttatttatcagaatgaccaaaaccattataccgtcttaaagacggaggttcttgaa
acgagcgaaaattatgatcaaaaagaaataaccgtgacaggctattttcctcttctgcat
gaagatgaaacatatacattctttgggatgctgacacagcatcccaaatttggccagcaa
tttcaggctgagcattaccggaaagaaattcccaaaacgcgcgacggtgtaatacaatac
ctttcaagcgacctgtttaaagggataggcaggaaaacagctgaagcgatagtggatgta
cttggagaaggcgcaatttcgaaaatgatggaagatccttctgtgcttgataaagtgccg
aagctcggcaaagacaaagcaaaacagctgcttgatcagctgaaggagcatcagggtcta
gagcaggccatgattagtttaaatcagcttggcttcggccctcagctttctatgaaaatt
taccaggcctatcaggaaagaacgatccaagtgattcaggaaaatccttttcagctagtt
aaagatatcgagggaattggcttcgtgcgcgctgatgagcttggaggacaaatgggcctc
ggcggaaaccatcctgagaggattaaagcggcttgcttttatacaattgaacatctttgc
ctgcaagaaggccatacatatgtttcactggagcagttaattataaaatcaatggaattg
ctgaattcatcgaagagttcaggaatcattgaaacagatatctcagagcaagtgatcaaa
cttgcagaagataaaggaattattattgaagaagacagagcttatctgccgtctctgttt
tttgctgaacagggacttgtgaaaagtatccagcgtgtccttttgcagacagaatatgag
agcatttttcctgaatcagagtttttgctttcactcgggaaactggaagagagaatgaaa
gtgcagtacgccccgactcaaaaagaagccatccaaacggctctgatgtctcctatgctt
ctgcttacgggaggacctggtacaggcaagacgaccgttataaaagggattgttgagctt
tacgcagatttgcatggctgttctcttgagcaaaaagactataaaaaagaagagcctttt
ccaatctcattagttgctccgacaggacgggcagcaaaaagaatgacagaagcaacaggc
ctgccggctgtaacgattcaccggctgttaaagtggaacggtgcagaaggatttgaccac
ggtgaggataacccgatcggtgcaaaactgctgattgttgatgaaatgtcgatggtggac
acttggattgcaaatcagctgtttaaagctctgcctgaacatattcaggtcataatggtt
ggagatgaagatcagctgccctctgtaggacctggtcaagtactgcgtgatttgcttgag
tctgaggcagttcccgtcgtaagacttacggatatttatagacaggcagagggttcatcc
ataatagagcttgcacatgatattaaaaaaggaaggctgcctgataatctggctgcacct
actaaagacagatcctttatccggtgcagcggtgcacaagtaaaagaagtggttgagaaa
gtcatatcaaacgccatcaaaaaaggatatacagcccgagatgttcaggtgcttgctccc
atgtaccgcgggcctgctggcatagatcagcttaatattatgctgcagcagctgtttaat
cctaaagctgaaaacaaaagggaaatgaagttcggcgagactgtatacagatcgggtgac
aaagttcttcagctcgttaatcagcctgagagcaatgtttataatggcgatattggcgag
attgtgtccattttttatgcaaaggaaaacactgaaaaagaagatatgattgtcatctct
tttgatggcaatgaggtcacatatacaaaatcagatttcaatcaatttacgcatgctttt
tgctgctcgatccacaaatctcagggcagcgaatttccgattgttgttgtgcctgtcgtc
aaaagctattacagaatgcttagaagaaacttaatttatacggccattacaagaagcaag
cagtttttaatcctttgcggggaacaagatgcccttttgcggggtattgaaaacagagat
catttaagccggcagacctctttaaaaatgaagctttcagaaaaacagcatatgattgaa
gagcttacagaggagcttccttttgatcttgctgatgccatgatcggaatggaaggcatt
accccgtatgactttatggaagacaacaaaatctaa
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