Malus domestica (apple): 103418655
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Entry
103418655 CDS
T03194
Name
(RefSeq) serine/arginine-rich SC35-like splicing factor SCL30A
KO
K12900
serine/arginine-rich splicing factor 10
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103418655
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103418655
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103418655
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103418655
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103418655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
103418655
NCBI-ProteinID:
XP_008354987
LinkDB
All DBs
Position
3:473678..477393
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AA seq
254 aa
AA seq
DB search
MRGRSYSPSPPPRGGYGRRGQRSPSPRGRYSGGRGSSRDLPTSLLVRNLRHDCRPEDLRR
PFGQFGVLKDIYLPKDYYTGEPRGFGFVQFVEPSDAEEAKYQMDGQLLLGREITVVFAEE
NRKKPSDMRHRERPSSRTTSRYRDRRRSPPRYSLSPPPRRARSRSHSHDYYSPPKRRDYS
RSVSPQERRYSREKSFSRSPPPYEGSRSRSQSPVRGPSRSRSRSHSPRRSIRRSRSPINE
DYPREPNGDRSPSP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaggggaaggagttacagtccatcaccaccaccgaggggaggatatggtaggagggga
caacgaagtcctagccccaggggtcgctatagcggtggtcgaggtagcagcagagatctt
cctacaagccttctagttcgcaaccttcgccatgattgcaggccagaagatctccgcagg
ccatttgggcagtttggtgtgcttaaggacatctacctgccaaaggattactatactggg
gagcctcgtggttttggttttgtccagtttgttgaaccttccgatgctgaagaggctaaa
tatcaaatggatggtcagcttcttcttggtcgggagataactgttgtgtttgcagaggag
aacaggaagaagccatctgatatgaggcatagggagcgtccaagctcccggactactagt
cgatatcgtgatcgaagacggtctcctcctcgctattcactctctccacctccacgccgt
gcaagatctcggtctcacagccatgattattattctcctccaaaacgaagggattattcc
agatctgtctcaccccaagagagaaggtacagcagagagaagtcgttttctcgatctcct
ccaccatatgaggggtcaaggagccgtagtcagagcccagttaggggtccaagccggagc
agaagcagaagccatagtccaaggcggagcataagaagaagccgaagccctatcaatgaa
gattacccaagggaaccaaatggagacagatctcctagtccatga
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integrated database retrieval system
