Malus domestica (apple): 103427797
Help
Entry
103427797 CDS
T03194
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103427797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103427797
Spliceosome [BR:
mdm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103427797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
103427797
NCBI-ProteinID:
XP_008364102
UniProt:
A0A498JHI4
LinkDB
All DBs
Position
7:complement(26654383..26658755)
Genome browser
AA seq
873 aa
AA seq
DB search
MEKDKSSKRDRRDRDRDYDKHRSRDADEKRSSKDSDYYRHHHRSDRDSKRERSREPRDHK
SRRERSREPSEDGRDVSRDHRERSYEPRDEREGSRERSRHREAKRERSEEREESKRKRKE
RERSEGRDGEGDDLEDKKRSRVSEGERKERKRFEEDGQEVNGGQKKSRRFGDRRVKEEEG
GENGEVVERRTELNVNASEVNVKKEEVGDDHIGNFQSVAATPNGSGRVGNGAALEPTMTS
RIVPETSFAPIHPLPTKVSSIPTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSANLSLG
DVEKIKRTLQKQKELTEKLKKLNQLKKEGNSSKDASQNLESKEGLKPPATTAGLLHAPTP
STAVTTAASVATFDSSALPISAAAVPNFEAVKRAQALAAQMGFRQDPDFSPLINSFPGQV
ATDVAAPQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKDAFQILKP
ELDVDPEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTRDAELIKLKTKFGEAQAKEQR
AKQQQFAKAKAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYKEVVDGTV
AEDKLKIEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMI
RQGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHVDRNIARKLTPAE
RREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVVV
VEGGSKSIKRYAKVMLRRINWAEAVKEEEEDDDADDDKPPNKCVLVWQGSVARRSFNRFS
VHECMTEAAARKVFADAGVAHYWDLAVNFQDDN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacaaatcgagcaaacgcgaccgcagagatcgagacagagactacgataaa
catcgcagccgtgatgccgacgaaaagcgatcgtcaaaggactccgattactaccgccac
caccaccgatcggaccgcgattccaagcgtgagcgctctcgcgagccccgcgaccacaaa
tctcgccgcgaacggtcgcgcgagccgagcgaagacggccgggatgtctcgcgcgaccac
cgtgagcggtcctacgagccgagggacgagagggaagggagcagagagaggtccaggcat
cgggaagcgaagcgcgagaggtcagaggagcgagaagaatcgaagcgtaagaggaaagaa
agggagaggagtgagggtcgagatggagagggtgatgatttagaagacaagaagaggtct
agggtttcggagggggagaggaaagagaggaagcgattcgaggaagatggtcaggaagtg
aatggtggtcagaaaaagagtaggaggtttggtgaccgccgagtaaaggaggaagagggc
ggagagaatggcgaagttgttgaacggagaactgaattaaatgtgaatgcgagtgaggtt
aatgttaagaaagaagaagttggggatgatcatattggcaatttccagagcgtcgccgcc
accccaaatgggagtggtcgggtgggtaatggcgctgctctggaacctactatgacatca
aggattgtgcctgagacctctttcgctcccattcatccccttcctaccaaggtatcttca
attcctacaacaaatgaaaataagggagttagtattaccagatctcatgaggttcatgga
aaatctagtacagatggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggt
gatgtagaaaaaatcaagagaactttacagaagcagaaggaattgactgagaagctgaag
aagcttaaccagttgaagaaggaaggcaattcaagcaaagatgctagccagaacttggaa
tcgaaggagggactgaaaccaccagctactactgctgggttgctacatgcaccgacccca
tcaacagctgttactacagctgcttctgtggcaacatttgactcgtctgccctacccata
tctgcagcagccgttcccaactttgaagctgtaaaacgtgcacaagcacttgctgctcag
atggggttccgtcaggaccctgatttttctcctctcataaactcgtttccaggacaggtg
gctactgatgttgctgccccgcagaagcctactaaagcccctgttcttcgtcttgatgct
cttggaagggaaatagatgaacatggaaacttagtgaatgtgacgaaaccaaacaacctc
agtaccctaaaggtcaacattaacaaacagaagaaagatgcattccagattcttaaacct
gaattggatgtggatcctgaaaagaatcctcattttgatccggatgtgggcattagtaaa
aaatttttgaggccaaagaggatgggtttcgcatttgtagaggaaggaaaatggacaaga
gatgctgagcttataaaattaaagactaaatttggagaagcacaagccaaagagcaaaga
gcaaagcagcaacagtttgcaaaggcaaaggcagcgccagatattaatccaaatttgata
gaagtaggagagagagttatcaccaaagaaaaaccaaaggatccaattcctgaaatcgag
tggtgggatgtgccactgttgcactctggtacttataaggaagttgttgatggtacagta
gctgaagataaattaaagatagagaaaatcacaatctatattgagcatcctcaacctatt
gagccccctactgagccagctcctccaccgcctcaaccactgaagctgaccaagaaggag
cagaaaaaactacgtacacagaaacgtctggccagagagaaagataggcaagagatgatt
agacaaggcctgcttgagcccccaaagccaaaagttaaaatgagtaatttgatgaaagtt
cttggctctgaagcaacccaagatccaaccaggcttgaaaaggagatcaggagtgcagct
gctgaacgtgaacaagctcatgtagacaggaatatagcacggaagctcactcctgccgag
cgtcgtgagaagaaagaaaggaagctttttgatgaccctaataacgtggagacaatcgtc
tcagtttacaggatcaatgagctgtcacatccaaaggcccgcttcaagatagatgttaat
gcgcgagagaaccggctgactggatcttgtgtgatatcagatggtattaatgttgtggtt
gttgaaggtggaagcaagtctatcaagaggtatgcaaaggttatgcttaggcgcataaac
tgggctgaggcagtaaaagaagaggaagaagatgatgatgctgacgatgacaagcctcct
aacaagtgcgtgttagtatggcaaggaagtgttgcaagacggagcttcaataggttttct
gttcatgaatgcatgactgaagccgctgcccggaaggtttttgccgatgctggcgttgct
cattactgggatcttgcggtcaactttcaagatgataattag
DBGET
integrated database retrieval system