KEGG   Malus domestica (apple): 103427797
Entry
103427797         CDS       T03194                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103427797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103427797
Spliceosome [BR:mdm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    103427797
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 103427797
NCBI-ProteinID: XP_008364102
UniProt: A0A498JHI4
LinkDB
Position
7:complement(26654383..26658755)
AA seq 873 aa
MEKDKSSKRDRRDRDRDYDKHRSRDADEKRSSKDSDYYRHHHRSDRDSKRERSREPRDHK
SRRERSREPSEDGRDVSRDHRERSYEPRDEREGSRERSRHREAKRERSEEREESKRKRKE
RERSEGRDGEGDDLEDKKRSRVSEGERKERKRFEEDGQEVNGGQKKSRRFGDRRVKEEEG
GENGEVVERRTELNVNASEVNVKKEEVGDDHIGNFQSVAATPNGSGRVGNGAALEPTMTS
RIVPETSFAPIHPLPTKVSSIPTTNENKGVSITRSHEVHGKSSTDGTSSTAGKSANLSLG
DVEKIKRTLQKQKELTEKLKKLNQLKKEGNSSKDASQNLESKEGLKPPATTAGLLHAPTP
STAVTTAASVATFDSSALPISAAAVPNFEAVKRAQALAAQMGFRQDPDFSPLINSFPGQV
ATDVAAPQKPTKAPVLRLDALGREIDEHGNLVNVTKPNNLSTLKVNINKQKKDAFQILKP
ELDVDPEKNPHFDPDVGISKKFLRPKRMGFAFVEEGKWTRDAELIKLKTKFGEAQAKEQR
AKQQQFAKAKAAPDINPNLIEVGERVITKEKPKDPIPEIEWWDVPLLHSGTYKEVVDGTV
AEDKLKIEKITIYIEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKRLAREKDRQEMI
RQGLLEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHVDRNIARKLTPAE
RREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGSCVISDGINVVV
VEGGSKSIKRYAKVMLRRINWAEAVKEEEEDDDADDDKPPNKCVLVWQGSVARRSFNRFS
VHECMTEAAARKVFADAGVAHYWDLAVNFQDDN
NT seq 2622 nt   +upstreamnt  +downstreamnt
atggagaaagacaaatcgagcaaacgcgaccgcagagatcgagacagagactacgataaa
catcgcagccgtgatgccgacgaaaagcgatcgtcaaaggactccgattactaccgccac
caccaccgatcggaccgcgattccaagcgtgagcgctctcgcgagccccgcgaccacaaa
tctcgccgcgaacggtcgcgcgagccgagcgaagacggccgggatgtctcgcgcgaccac
cgtgagcggtcctacgagccgagggacgagagggaagggagcagagagaggtccaggcat
cgggaagcgaagcgcgagaggtcagaggagcgagaagaatcgaagcgtaagaggaaagaa
agggagaggagtgagggtcgagatggagagggtgatgatttagaagacaagaagaggtct
agggtttcggagggggagaggaaagagaggaagcgattcgaggaagatggtcaggaagtg
aatggtggtcagaaaaagagtaggaggtttggtgaccgccgagtaaaggaggaagagggc
ggagagaatggcgaagttgttgaacggagaactgaattaaatgtgaatgcgagtgaggtt
aatgttaagaaagaagaagttggggatgatcatattggcaatttccagagcgtcgccgcc
accccaaatgggagtggtcgggtgggtaatggcgctgctctggaacctactatgacatca
aggattgtgcctgagacctctttcgctcccattcatccccttcctaccaaggtatcttca
attcctacaacaaatgaaaataagggagttagtattaccagatctcatgaggttcatgga
aaatctagtacagatggaacatcttcaactgctgggaaaagtgcgaatctgtctcttggt
gatgtagaaaaaatcaagagaactttacagaagcagaaggaattgactgagaagctgaag
aagcttaaccagttgaagaaggaaggcaattcaagcaaagatgctagccagaacttggaa
tcgaaggagggactgaaaccaccagctactactgctgggttgctacatgcaccgacccca
tcaacagctgttactacagctgcttctgtggcaacatttgactcgtctgccctacccata
tctgcagcagccgttcccaactttgaagctgtaaaacgtgcacaagcacttgctgctcag
atggggttccgtcaggaccctgatttttctcctctcataaactcgtttccaggacaggtg
gctactgatgttgctgccccgcagaagcctactaaagcccctgttcttcgtcttgatgct
cttggaagggaaatagatgaacatggaaacttagtgaatgtgacgaaaccaaacaacctc
agtaccctaaaggtcaacattaacaaacagaagaaagatgcattccagattcttaaacct
gaattggatgtggatcctgaaaagaatcctcattttgatccggatgtgggcattagtaaa
aaatttttgaggccaaagaggatgggtttcgcatttgtagaggaaggaaaatggacaaga
gatgctgagcttataaaattaaagactaaatttggagaagcacaagccaaagagcaaaga
gcaaagcagcaacagtttgcaaaggcaaaggcagcgccagatattaatccaaatttgata
gaagtaggagagagagttatcaccaaagaaaaaccaaaggatccaattcctgaaatcgag
tggtgggatgtgccactgttgcactctggtacttataaggaagttgttgatggtacagta
gctgaagataaattaaagatagagaaaatcacaatctatattgagcatcctcaacctatt
gagccccctactgagccagctcctccaccgcctcaaccactgaagctgaccaagaaggag
cagaaaaaactacgtacacagaaacgtctggccagagagaaagataggcaagagatgatt
agacaaggcctgcttgagcccccaaagccaaaagttaaaatgagtaatttgatgaaagtt
cttggctctgaagcaacccaagatccaaccaggcttgaaaaggagatcaggagtgcagct
gctgaacgtgaacaagctcatgtagacaggaatatagcacggaagctcactcctgccgag
cgtcgtgagaagaaagaaaggaagctttttgatgaccctaataacgtggagacaatcgtc
tcagtttacaggatcaatgagctgtcacatccaaaggcccgcttcaagatagatgttaat
gcgcgagagaaccggctgactggatcttgtgtgatatcagatggtattaatgttgtggtt
gttgaaggtggaagcaagtctatcaagaggtatgcaaaggttatgcttaggcgcataaac
tgggctgaggcagtaaaagaagaggaagaagatgatgatgctgacgatgacaagcctcct
aacaagtgcgtgttagtatggcaaggaagtgttgcaagacggagcttcaataggttttct
gttcatgaatgcatgactgaagccgctgcccggaaggtttttgccgatgctggcgttgct
cattactgggatcttgcggtcaactttcaagatgataattag

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