Malus domestica (apple): 103440278
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Entry
103440278 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1 homolog 3-like
Organism
mdm
Malus domestica (apple)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_oxidored
FAD_binding_2
FAD_binding_3
Pyr_redox_3
NAD_binding_9
Lycopene_cycl
Pyr_redox
GIDA
AlaDh_PNT_C
MurD-like_N
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
103440278
NCBI-ProteinID:
XP_028962401
LinkDB
All DBs
Position
8:1322120..1330524
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AA seq
1870 aa
AA seq
DB search
MVDKMDGEDKKSGFKKRSKFLEANMVDSDDDEPIGSLLKLKRQRNPKKVKPRSEGGGERG
QKIEDEEEYLGGLDDTLASLRKKLKGPKKDSGTGTMRGRSFDLDGVQSLDRSSNGHVDDG
GLDAKSVSRVLEKGPVMGDDGSDVTIDIGVENKLNGNVRGKRPKISRSMRFGEGSNSSLD
HHLRDSLPAFSRKSQSGLVMNSRASSRPKEKSGSKVLEEGLKPSVDGVAQNTPLSDSNSL
DSASDHCKADESQSFDYRLCQASNLHRENQETFNDKKHKRPYKIVAEDRAPVYSHSGFDS
KLINNEAIVAPSGSNFQEGPCSSDEVNDGDSKHLTQQMRTFEDGLKHCSIGGSIQSKDVL
GRCTSAADCETSSPAGKGIMRPHCNDDLLDKSCENTLEDKHLVSSLHLQQNSLTCHVKVE
DELDSDRCPNFSQHTQHQLLNFASNTVGMEDTHSNCNGLITYTKNPGLASGPLQEKNDVP
IHDHLITCEEADENESCPEDTVSLPDVENKSTKLSAIQRVGRNVRKRRHGDMAYEGDADW
DVLINDQGSDGDNSFRMRVKFDSSSSIGTESESGEAAAVSAGLKANAVGPVEKIKFKEIL
KRRGGVQDYLECRNQILALWNKDVSRILPLTDCGVTDTSCADDSPRASLIKDIYAFLDLS
GYINIGIAREKDKAEPGSKHDYKILREKNFEEISGVSVADSEDGVSFIIGQVKSSKTKID
VKSGVIIKSNNSTQGVSRDNELVTTVALELSNATNHAECKADHLENTSVDARLQSKLDNM
DVSSSVPIGETLGDGGIPLVTPELKNVSHSTQCASQDHAVRNNNLQCGLEVKKKIIVIGA
GPAGLTAARHLQRQGFSVTILEARSRIGGRVYTDRSSLSVPVDLGASIITGVEADWATER
RPDPSSLVCAQLGLELTVLNSDCPLYDIATGEKVPADLDEALEAEFNSLLDDMVLLVAKE
GEQTRLSLEEGLEYALKRRRMAKTGTSIEAKELNGLMDGFIDAKKSIDRAEESCQKQEVL
SPLERRVMDWHFANLEYGCATLLKEVSLPNWNQDDVYGGFGGAHCMIKGGYSTVIESLGE
GLQIRLNHVVTDVSYGTKDAGLNTNPGNKVKVSTSNGNDFSGDAVLVTVPLGCLKAETIK
FSPPLPHWKHSSILRLGFGVLNKVVLEFPDVFWDDSVDYFGATAEETDLRGQCFMFWNVX
KTVGAPVLIALVVGKAAIDGQKMSPSEHVNHALAVLRKLFGEASVPDPVASVVTDWGRDP
FSYGAYSYVAVGASGEDYDILGRPVENCLFFAGEATCKEHPDTVGGAMMSGLREAVRIID
ILTTGNDYTAEAEAIAGIQRQSDSERDEVRDMTRRLDAVELSNVLYKNKEALLQDMFFNA
KTTKGRLHLAKELLSLPAETLKSFAGTKEGLTILNLWILDSMGKAGTQLLRHCVRLLVLV
STDLLAVRLSGIGKTVREKVCVHTSRDIRAIASQLVNVWLEVFRKEKASNGALKLSRQAT
AADAWKRKTIRDPSSSKPPLHTFHCGLEHKGSLQDSASTASHLPLNANGRPHSELKEIDV
AVTEAERAAIAAAEAARAAALAAAEAYASSEAKSSTLLQLPKIPSFHKFARREQYPQMDE
YDLRRKWSGGVLGRQDCVSEIDSRNCKVRDWSVDFSAACVNIDSSRMSVDNLSQRSNPNE
TASQTNFREHSGESAAVDSSIYTRAWVDTAGSAGIKDYHAIEMWQSQAAAADPDFFHSAP
YINDEEDSNTTSRKHSWKNEGPVNESSVSQVTMNKESLKSHHRGADNIKQAVVDYVASLL
MPLYKAKKIDREGYKSIMKKSATKVMELATDSEKAMAVSEFLDFKRRNKIRAFVDTLIER
HMAAKPTMKS
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaaaatggatggggaggacaagaagtccggctttaagaaaagatcaaaattt
cttgaggcgaatatggttgattctgatgatgatgagccaattgggtcactgttgaagtta
aagaggcagagaaaccctaagaaggttaagccgcggtcagagggtggcggcgaaaggggc
cagaagattgaggacgaagaagagtatttgggggggctggatgataccttggcaagtttg
aggaagaagttgaagggtcctaagaaagattctgggactggaactatgagggggaggagt
tttgatttggatggtgtacagtctttggatcggtcctctaatgggcatgtggatgacggg
ggattagatgcaaaatcggtgtcaagagttttagagaaaggccctgtcatgggtgatgat
ggatctgatgtgactatcgatataggggtagaaaacaagcttaatggaaatgtaagggga
aagagacccaagatttctaggtctatgagatttggggaaggttctaatagctctttggat
catcatctgagagattcattaccagcattttcccggaagtcacaatctggtttggtaatg
aattctcgtgcctcttcacgtccaaaggagaagagtggttctaaggttttggaggaaggg
ttgaaacctagtgtggatggtgttgcacaaaacacgcctttatctgattcaaattcattg
gattcagcctctgatcattgtaaggcagatgaaagtcaaagttttgattacagattatgt
caagcctctaacctccacagggagaatcaagagacattcaatgataaaaagcataaaagg
ccttacaaaatcgttgcagaagatcgagctcctgtctactcacattcaggatttgattcc
aaattgattaacaatgaagccatagtggctccttctggttcaaattttcaagagggacca
tgcagctcagatgaagttaatgatggagacagcaaacatttgacacagcaaatgcgaact
tttgaggatggattgaagcactgctctataggaggttccattcagtccaaggatgttttg
ggtagatgcacctcagctgcagactgtgaaacctcttctccagctgggaaaggaattatg
cggcctcattgtaatgatgatcttctggataagtcatgtgaaaatacgttggaggacaaa
catttggtgtcctccttacatctacaacagaactccttgacatgccatgtgaaggttgag
gatgagcttgattctgacagatgtccaaacttttcccagcatactcaacatcagttgttg
aactttgcctcaaacactgtggggatggaagacactcacagtaattgtaatggtctaatt
acttacactaagaatcctgggcttgcttctggtcctttacaggagaaaaatgatgttcca
attcatgatcatcttatcacttgtgaagaggctgatgaaaatgagagttgcccagaagac
acagtatctctaccagatgttgaaaacaaaagcactaagctatcagctatccagcgtgtg
gggcgcaatgttagaaagcgtaggcatggagacatggcttatgagggggatgctgattgg
gacgtattgataaatgatcaaggttcagatggtgacaattcatttagaatgagagtgaag
tttgattcctcttcaagtattggtacagagtctgaaagtggtgaggctgcagcagtgtct
gctggtcttaaagccaatgcagtcggtcctgttgagaagatcaaattcaaagagattttg
aagcgcagaggtggggttcaggactatttggaatgcaggaatcagatccttgctctgtgg
aataaagatgttagtcgaattttgcctcttactgattgtggggtaacagatacttcttgt
gcggatgattcacctcgtgcttccctaattaaggatatttatgcattccttgatctcagt
ggctatataaatattggaattgctcgtgagaaggataaagcagaacctggttccaagcat
gactataaaattttgagagaaaaaaatttcgaggaaatttctggggtttcagttgctgat
tcagaggatggagtttcctttatcataggccaggttaagagttctaaaactaaaattgat
gtgaagagtggtgtcataatcaaaagcaacaactcgacgcagggagtctcaagagacaat
gagcttgttactacagtggcattggaattatccaatgcaacaaaccatgctgagtgcaag
gcagatcacctggaaaacacaagtgttgatgcaaggttacaaagtaaattggacaatatg
gatgtttcaagtagtgttccaattggtgagacattgggtgatggaggcatccctcttgta
actccagagttaaagaatgtatcacatagtactcagtgtgcatcgcaagatcatgcagtg
agaaataataatctgcaatgcggtctggaagtcaaaaagaaaatcattgtcataggtgct
ggtcctgctggattaactgctgcacgccacttgcaacgtcagggcttttcagtcactata
ttggaagctaggagtaggatagggggccgtgtttatacagacaggtcatctctatcagtt
cctgtggatcttggtgctagcattataactggtgttgaggctgattgggcaactgaaaga
cgaccagacccctcctctttggtttgtgctcagctgggccttgagttgactgtcttaaac
agtgattgccctctttatgacattgcaacaggtgaaaaggttcctgcagatctggatgaa
gcattggaagcagagttcaacagccttctcgatgacatggtattgcttgttgcaaaggag
ggagaacagacaagattgtccctcgaggaaggtttggaatatgccctcaagaggcgtcgt
atggcaaaaacagggactagtattgaagcgaaagaactgaatggtttaatggatggtttc
attgatgccaaaaaaagtattgatagagctgaagaaagttgtcaaaagcaagaggttttg
agccctcttgagaggagggtcatggattggcattttgccaatttggaatatggttgtgct
actctgctgaaggaggtatctctccccaactggaaccaggatgatgtttatggtggcttt
ggaggagctcactgcatgattaaggggggttatagcactgttattgagtctcttggagaa
ggacttcaaattcgcttgaatcatgtagtaactgatgtttcatatggcaccaaggatgct
ggattgaatactaacccgggtaacaaagtcaaggtttccacatctaatggcaacgatttt
tcgggagatgcagtcttggtaacagtacctcttggttgcttaaaagcagaaactatcaaa
ttttccccaccgttaccccactggaaacattcttccatcctgcgacttgggtttggagtt
cttaataaagtagttttggaatttccggatgtcttttgggatgactctgtggattacttt
ggagcaactgctgaggaaacagacctgaggggccagtgctttatgttctggaatgtcnag
aaaaccgttggggctcctgttcttatagctttagtggttggtaaggcagctatagatggg
caaaagatgagcccttctgaacatgttaaccatgctttagcggtacttcgtaaattgttt
ggagaggcttcagtacctgatcctgttgcatcagttgtgacagattggggtagggatcct
ttcagctatggtgcctactcatatgttgctgttggagcttcgggggaagattatgatata
ctagggagacctgttgagaactgcctattttttgctggtgaagctacctgcaaggagcat
cctgacactgttggtggtgcgatgatgagtggccttcgggaggcagtgcgtataattgac
atacttactactggaaatgattacacagcagaagcagaggcaattgcgggcattcagaga
caatcagattctgaaagggatgaagttagagacatgacaaggagacttgatgcagttgaa
ctttcaaatgtcctttacaagaacaaggaggccctactccaggacatgttctttaatgca
aagaccactaaaggaaggttgcatctggccaaagagttattaagtcttcccgctgaaacg
ttgaagtcctttgctggcaccaaagaagggctgactattctcaacttgtggatactggac
tcgatggggaaggctgggactcaactcttgcggcattgtgttcggctccttgtgcttgtt
tcaacagacctactggctgtgcgcttgtctggcattgggaagactgtaagagaaaaagtt
tgtgtacatacgagccgtgatatacgtgccatagcaagtcagctggttaatgtgtggctt
gaagtttttcgcaaggaaaaagcttccaatggtgcattgaagttgtcaaggcaagcaact
gctgcagatgcatggaagagaaaaacaattagagatccatcttctagtaagccacctcta
cacacatttcattgtggtttggagcacaaaggaagcttacaggattcagcatccaccgca
agccatttgcctttgaatgcaaatggcaggccacattctgagctaaaggagattgacgtt
gctgtgacagaagcagaacgagctgccattgctgctgctgaagcagcccgtgcagcagca
cttgcagctgccgaggcatatgcatcttcagaagccaagagcagtacactgcttcagctt
cccaagattccctcatttcataagtttgctcgacgggagcagtaccctcaaatggatgag
tatgatttgaggaggaagtggtctggtggtgttttgggtagacaagattgtgtatcagaa
atagactccaggaactgcaaagttagggactggtcagttgatttctctgctgcttgcgtc
aatattgatagttcaagaatgtcagtcgataacctctcgcagcggagcaatccaaatgag
actgctagtcaaacgaatttcagagagcactcaggagagagtgctgctgtcgacagcagt
atttatacaagagcatgggttgatacagctggtagtgccgggataaaggattatcatgcc
attgagatgtggcaatctcaagcagctgcagcagaccctgattttttccattcagcacca
tatataaatgacgaggaagattcaaatacgacttcgagaaaacacagctggaagaatgaa
ggacctgtaaatgagagctctgtttcccaagttaccatgaacaaggagtcgttaaaaagt
catcatcgaggagcagataatattaagcaggctgttgtcgattatgtggcttcattgctt
atgcccctttataaagctaaaaaaatagatagagagggatacaagtcaatcatgaagaaa
agtgctaccaaggtcatggagctggccacagactcagaaaaagcaatggctgtttctgag
tttcttgatttcaagcgcaggaacaagatccgtgcatttgtggatacattgattgagagg
cacatggcagcaaagcccacaatgaaatcttga
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