Methylomonas denitrificans: JT25_012235
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Entry
JT25_012235 CDS
T04191
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mdn
Methylomonas denitrificans
Pathway
mdn00470
D-Amino acid metabolism
mdn00550
Peptidoglycan biosynthesis
mdn01100
Metabolic pathways
mdn01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mdn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JT25_012235
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JT25_012235
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JT25_012235
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mdn01011
]
JT25_012235
Enzymes [BR:
mdn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
JT25_012235
Peptidoglycan biosynthesis and degradation proteins [BR:
mdn01011
]
Precursor biosynthesis
Amino acid ligase
JT25_012235
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
RimK
ATP-grasp
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AMK77240
UniProt:
A0A126T5B0
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All DBs
Position
complement(2666184..2667134)
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AA seq
316 aa
AA seq
DB search
MKPLRIKNAADFGKVAVLLGGSAAEREISLNSGNAVYQALKAQGVDAVAIDVTGSPIQAL
ADVKVDRVFNVIHGRGGEDGVLQAILQVLGLPYTGSGVMASALSMDKLRTKLCWQGLGLS
TPLWFVLKSQTDIDACIAKLGFPVIVKPAQEGSSIGMSKATNRDELVAALQLAKQYLCDV
YAEQWVQGQEYTVGVLDGEALPAIRLETPNTFYDFDAKYRANTTKYHCPCGLSAEREQQL
QALAVQACQALDVKGWARVDVFIDTNDRSQLIEVNTVPGMTDHSLVPMAAKAVGISFEEL
VWRILETSMAGQGEPV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattacgcatcaaaaatgccgccgatttcggcaaagtcgcggtcctgttgggc
ggctcggccgcagagcgcgaaatatccttgaacagcggcaacgcagtgtatcaagccttg
aaagcacaaggcgtcgatgcggtggcgatagacgtgaccggcagcccgattcaggcttta
gccgatgtcaaagtcgacagagtattcaacgtgatccacggccgcggcggcgaagacggc
gtgttgcaagcgattctacaagttttgggtttgccttataccggttccggggttatggca
tcggcattgagcatggacaaattacgcaccaagctgtgctggcagggcttgggcttgagc
actccgctttggttcgtactaaaaagccagaccgatattgacgcctgcatcgccaaactg
ggttttccggtgatcgtcaaaccggcgcaggaaggctccagcattgggatgagcaaagcc
accaatcgcgacgaattggtcgccgcgctgcaattggccaaacagtatctatgcgacgtg
tatgccgaacaatgggtacaaggccaggaatacaccgtcggcgtactggacggcgaagcg
ctaccggcaattcgcttggaaacacccaataccttttacgatttcgacgccaaatatcgg
gcgaataccacgaaataccattgcccttgcggcttgagcgcagagcgcgaacaacaatta
caagccttggcggtacaagcctgccaggccttggatgtgaaaggctgggcgcgcgtggat
gtatttatcgacactaacgaccggtcgcaactgatcgaagtcaataccgtgccgggcatg
accgaccacagtctggtgccgatggcagccaaagcggtggggatcagtttcgaggaattg
gtctggcgcattttggaaaccagcatggcgggtcaaggtgagccggtttag
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