Monodelphis domestica (gray short-tailed opossum): 100013430
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Entry
100013430 CDS
T01031
Symbol
EDEM1
Name
(RefSeq) ER degradation enhancing alpha-mannosidase like protein 1
KO
K10084
ER degradation enhancer, mannosidase alpha-like 1
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100013430 (EDEM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
mdo04091
]
100013430 (EDEM1)
Lectins [BR:
mdo04091
]
M-type lectins
100013430 (EDEM1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_47
Motif
Other DBs
NCBI-GeneID:
100013430
NCBI-ProteinID:
XP_001364795
Ensembl:
ENSMODG00000004556
UniProt:
F6R5E1
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Position
6:236934178..236973834
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AA seq
663 aa
AA seq
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MQWKSLVLGLLLLRLGLHGALWLAFGLGPSMGFYQRFPISFGLQNLKGIEGRAASSAPPY
WLGAPGVRGPQPSRRTPAEQSSRPEKGPGTPEPPGPGMCPKSYWASLLGGWAPGGGVDEY
ERRYSSAFPPQLRAQMRDLARGMFAFGYDNYMAHAFPEDELNPIHCRGRGPDRGNPSNVN
INDVLGNYSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFDKDSTVQVFEATIRVLGSL
LSAHRIITDSEQPFGDMTIKDYDNELLHMARDLALRLLPAFENTKTGIPYPRVNLKSGVP
PDSNNETCTAGAGSLLVEFGILSRLLGDSTFEWVARRAVKALWNLRSNYTGLLGNVINIQ
TGTWVGRQSGLGAGLDSFYEYLLKSYILFGEDDDLEMFNAAYRSIQTFLRRGRRACNEGE
GDPPLYVNVNMFSGQMMNTWIDSLQAFFPGLQILIGDVENAICLHAFYYAIWKRFGALPE
RYNWQLQVPETPFYPLRPELVESTYLLYQATKNPFYLHVGMDILQSLEKHTKVKCGYATL
HHVIEKSKEDRMESFFLSETCKYLYLLFDEENPVHQSGNGYMFTTEGHIISVDKYLRNSP
WKKSLSEEEVGEHQEEKMSRSKPLELKVNTSGLNCNRIPDERRYSLPLKSIYMRQIDQMV
GLI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggaagtcgctggtcctggggctgttgctgctgcggctcggtctccacggcgcc
ctctggctcgccttcggcctgggccctagtatgggtttctatcagcgcttccccatcagc
ttcggcttgcagaacctgaagggcattgagggccgcgccgcctcctccgcgccgccctac
tggctgggggcgccgggagtcaggggcccccagccatcccggagaacaccggcggagcag
tcgtctcggcccgagaagggcccagggaccccggaaccgccggggccgggcatgtgccct
aaatcgtattgggcgtcgctgctgggaggctgggccccgggcggaggggtcgacgagtac
gagcggcgctacagcagcgcctttccgccccagctacgggctcagatgcgcgatttggcc
cggggcatgttcgctttcggctatgacaactacatggcccatgccttcccggaggacgag
ctcaaccccatccactgccggggccgggggccggaccgcgggaacccttcaaatgtgaac
atcaatgatgttctaggaaactattctttaactctggttgatgccttggatacacttgca
ataatgggaaattcatcagagttccagaaggcagtgaaattagtgatcaacacagtttca
tttgacaaagactccacagtccaagtctttgaggctacaatcagggtccttggaagtctc
ctttctgcccatagaataataactgactctgaacagccctttggtgacatgacaattaag
gattatgataatgaactgttgcatatggcccgggatctggcgttgagattgctccctgcc
tttgaaaatacaaaaactggaattccctatcctcgggtgaatctcaagagcggtgtaccc
cctgacagcaataatgagacttgtaccgctggagctggctccttgctggtggagtttggg
attcttagtcgactgctgggggattcaacatttgagtgggtggcgaggagagctgtgaag
gccctttggaatcttcgcagcaattacactgggctcttagggaatgtcataaacatccaa
acaggcacctgggttggaaggcagagtggtcttggagccggattagattccttctatgaa
tacctcttgaaatcttacattctctttggagaagatgatgacctggagatgttcaatgct
gcctatcggagtattcagacctttttaagaagaggccggagagcttgtaatgaaggtgaa
ggagaccctccgttatatgtgaatgtgaacatgttcagtgggcaaatgatgaatacctgg
attgattctctgcaagcttttttcccgggattgcagatattaataggggatgtggaaaat
gccatctgccttcatgccttttattatgccatttggaagcgatttggtgcccttccagaa
cgatacaactggcagctccaggtccccgaaactcccttttaccctctgaggccagagctg
gtggaatccacctatctcctttaccaggcaaccaagaatcccttttatctccatgtagga
atggatattcttcagagcctggaaaagcatacaaaagtcaaatgtggttatgctacatta
catcatgtcatagagaaatcaaaagaggaccggatggaaagtttcttcctgagtgagacc
tgtaaatacttgtatctgttgtttgatgaagagaatccagtgcatcagtctggaaatgga
tacatgtttactactgaaggacatatcatatctgtggacaaatatcttcggaactctcct
tggaagaaatccctttcagaagaagaggtgggagaacaccaagaagaaaaaatgtccagg
tcgaaacctttggagctaaaagtcaacacctcaggcctaaattgcaatcgtattcctgat
gagagaaggtactctctgcccctcaagagcatctacatgagacagattgatcagatggtc
ggcctgatttga
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