Monodelphis domestica (gray short-tailed opossum): 100023377
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Entry
100023377 CDS
T01031
Symbol
CHD8
Name
(RefSeq) chromodomain helicase DNA binding protein 8
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Pathway
mdo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100023377 (CHD8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mdo03036
]
100023377 (CHD8)
Chromosome and associated proteins [BR:
mdo03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100023377 (CHD8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
100023377
NCBI-ProteinID:
XP_001368949
Ensembl:
ENSMODG00000006219
UniProt:
F7FS88
LinkDB
All DBs
Position
1:complement(169994966..170057628)
Genome browser
AA seq
2591 aa
AA seq
DB search
MADPIMDLFDDPNLFGLDSLTDDSFNQVTRDPIEEALGLPSTLDSLDQMNQDGGNSDLGS
STSSGLPPPTEETPPSEPPKESVTPAPESLTLHDYTTPPVGQEQPNQTILQAPPPPTGLL
QVSKGQEILSQGNPFMGVSATAVSSSSGGGQPPQTAPKIVILKAPPGTSVTGAHVAQIQA
QAITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNAVLATKVTGGQATVQRIVQ
PSRPVKQLVLQPVKSSTTTGNPGTGATPLKPAVTLTSAPTQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKNAQGQPAKVVTIQLQVQQPQQKIQIVQQPPSA
QQQQQPPSAQPVTLSSVQPAQIMGPGQSPGQRLTVPLKVVLQPQAGSSQGASSGLSVVKV
LSASEVAALSSPAAPAPHTGGKAGVEENRRLEHQKKQEKANRIVAEAIARARARGEQNIP
RVLNEDELPSVRPEEEGEKKRRKKNTGERLKEEKPKKSKASGTSKSKGRSKLNTITPVVG
KKRKRNTSSDNSDVEVMPAQSPREEEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEEE
VDVTGPVKPEPILPEPIQEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSGQ
YTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFNP
DYVEVDRILDESHSIDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKVREFKRIQSR
HPELKRVNRPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGLG
KTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQQ
YEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLL
DSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQKL
QAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTNM
PNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKL
LPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDDE
GSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKKA
DLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHAY
GRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENIK
GFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTLF
QDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEVP
TNWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSDI
VEGVDFDKDCEDPEYKPLQGPPKDQEDEGDPLMMMDEEISVIDSDEVQVTQQPGHLFWPP
GSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTRR
EESDFYRVVSTFGVEFDPDTLHFHWGRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRLP
PAAGDESPDPTLFIEPITEERASRTLFRIELLRRLREQVLCHPLLEDRLALCQPPGPELP
KWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQSQQAGAPAPSLSRCS
TPLLHQQYASSTASPLPLRPDVPTEKLPEEAATRVPSLESLALKLEHEVVAKNRPTPQDY
ELRGVPSDPTPMASQSVPPVKLEEEDDSDSELDLSKLSASSSSSSSSSSSSSSTEDSEDE
KEEKLSADQSCSKLYDEESLMSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSSRRNQEMVTGGSLGQGNHLLDSPLLAPGEYGDSPVPTPRSSS
AASMAEEEVAAVSTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVLGDGH
PLFHKKKGSRKKLVELEVECMEEPHHLDVDLEARIPVINKIDGTLLVGEDAPRRAELEMW
LQGHPEFAVDPRFLAYMEDHRKQKWLRCKKPNKAEMGCLGMEQVQTVNSRNGKKGHLPDT
MFNRVLPGPVAPDNSKKRARRVRPDLSKMVALMQGGGSGPLSLHSTFQHGSSGLQPVSAL
GHSSATSTSLPFVPFVMGGTVSSPHVDSSTMLHHQHHHHHHHHHHHHHPGLRASSYPSTP
ATTTSAGTALRLPPLQPEEEEEEEEEDEEEEDEEEEDDDLSQGYDSSERDFSLIDDPMMP
ANSDSSEDADD
NT seq
7776 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctttttgatgaccccaatttatttggcctggactctcta
actgatgacagcttcaaccaagtcacacgagaccccatagaagaagctcttgggctacca
agtaccctggactctttagatcagatgaaccaagatggtggaaacagtgacttgggaagt
tcaacatcaagtggcctgccccctccaacagaagaaacccccccttcagaacctcccaaa
gaatcagtaactccagccccagagtcactcaccttgcatgattataccactccaccagtg
ggccaggaacaacccaatcaaaccatcttacaggcaccaccaccaccaacaggacttctt
caggtctccaagggccaggagatcctgagccaaggaaatccttttatgggtgtctctgct
acagctgtctcctccagtagtggtggggggcaaccccctcagacagcacctaagattgtc
atcctcaaggccccacctggtacctcagtcacaggtgctcatgtggcacagatccaagcc
caggccatcaccagcacagcacagcctttagtggctggcacagccaatggtggtaaagtc
acttttaccaaggtgctaactggtactcctcttagaccaggtgtctccattgtttctggc
aatgcagtcttggccactaaggtcactggaggccaggccacagtgcagcgcattgttcaa
cccagccggccagtaaagcagctggtcctgcagccggttaagagttctaccacaactgga
aacccagggactggagcaacaccactgaagcctgctgtcactctgacctcagctcccact
cagggtgaatcaaagcgcatcactctggttctccagcagcctcagtcaggagggcctcaa
ggccatcggcatgtcgtgctggggagtctgccaggcaagattgtgttgcagggcaaccag
ctggcagccctgactcaggccaagaatgcccaggggcagcctgccaaagtagtgactatc
cagctgcaggtgcagcagccacagcaaaagattcagattgtacagcagccaccctcagcc
cagcagcagcagcagccaccctcagcccagccagtgaccctgtcctcggtgcagccagcc
cagattatgggaccaggacaaagcccaggccaaagacttacagtaccactcaaagtggtg
cttcagccccaggctggctcttcccaaggggcctcctcaggcctgtcagtggttaaagtg
ttgagtgccagtgaggtggcagctctgtcttccccagcagcccctgctcctcacaccggg
ggcaaagctggggtggaggaaaaccgaaggctagagcatcagaaaaaacaagagaaagct
aacaggatagtggcggaggccattgccagagcccgggcccgaggtgagcaaaatatccca
cgagtcttaaatgaagatgagttgcccagtgtccgacctgaggaagaaggtgagaaaaaa
cgaaggaagaagaacactggagagaggctcaaagaagagaaaccaaaaaagagcaaagct
tccggtacctccaagtctaagggcaggagtaagttaaacaccatcactcctgtggtgggt
aagaagaggaaacgcaacacctcatctgataattctgacgtagaagtcatgcctgcacaa
tcacccagggaggaggaagagagcagcattcagaagaggcgctcaaaccgacaagtgaag
cgaaaaaaatacacagaggatttggacattaaaatcacagatgatgaggaggaggaagag
gtggatgtgactggtccagtgaagcctgagcccattttgcctgaaccaattcaggaacct
gatggcgagacattgccatccatgcagttctttgtggagaaccccagtgaagaagatgca
gccattgtggacaaagtgctttctatgcgggtggtgaaaaaggagcttccttctggacaa
tatactgaagcagaggaattttttgtcaagtataagaattattcttatctgcactgtgaa
tgggccactatctctcaattagaaaaagacaagaggatccatcagaaacttaagcgattc
aaaaccaaaatggctcagatgagacacttcttccatgaggatgaagagcccttcaatcca
gactatgtggaagtggacaggatattggatgagtctcacagtattgacaaagacaatggt
gagcctgtaatttactacctggtcaaatggtgttctctgccctatgaggatagtacatgg
gaactaaaagaagatgtagatgagggcaaagtccgggagtttaagcgaatccagtcaagg
catccagaactcaaaagagtgaatcgacctcaggcaagtgcctggaagaaattagaattg
tctcatgaatacaaaaaccggaatcaactacgagaataccagctagagggggtcaattgg
cttctttttaactggtacaacaggcagaactgtatcctggctgatgaaatggggctgggc
aaaacaattcagtccattgccttcctacaagaggaatataacgtaggcatccatggcccc
ttcttagtcattgccccactctctacaattaccaattgggaaagggagttcaatacatgg
acagagatgaacactatcgtgtaccatggcagtctggccagccggcaaatgatccagcag
tatgaaatgtactgcaaagattcacgggggcggcttatccctggggcatataagtttgat
gccttgattaccacttttgagatgatcttgtcagactgccctgagctccgggagattgaa
tggcgttgtgtcattattgatgaagctcatcgactcaagaatcgaaattgcaagctgctt
gatagcctcaagcacatggacctggagcataaagtgctgctcacaggaacaccactgcaa
aacactgtggaagaactttttagcttattacacttcttggaaccttcacagtttccttca
gaatcagagttcctcaaggactttggtgatctcaagacagaagagcaggtacagaagctg
caagccattctgaagccaatgatgttgagaaggcttaaagaagatgttgaaaaaaaccta
gctcccaaacaggagacaatcattgaagtggagctaacaaacatccaaaagaagtattat
cgtgctatcttggaaaaaaatttttccttcctttccaaaggtgcaggtcacacaaacatg
cctaacctacttaatacaatgatggagctacgtaaatgttgtaatcatccatatctcatc
aatggcgcagaggaaaaaatcctaacagaatttcgggaggcctgccatatcatcccccat
gacttccatctccaggccatggtccgctcagctggtaagctggttctgattgataagcta
cttccaaaactcaaggctggtggccataaggtgctgatcttctcccagatggttcgatgc
ctggatatcctggaggattatctgatccagagaagatacttatatgaacgtattgatgga
cgtgtgcgaggcaacctacgtcaggctgccattgaccgttttagcaagcctgattctgac
cgatttgtcttcttgctctgcacccgagctggtggccttggtatcaaccttacagctgca
gatacttgcatcatctttgattcagactggaacccacagaatgatttacaggcgcaagca
cgttgtcatcgaatagggcaaagcaaagctgtgaaagtttaccgccttatcactcgaaat
tcttatgagagggagatgtttgataaggccagccttaagttgggactggataaggcagta
cttcagtccatgagtggtcgggatggcaacatcactgggattcaacagttctccaagaag
gagattgaagacctcttaaggaaaggtgcttatgcagctattatggaagaagatgatgaa
ggttccaagttttgtgaggaagatattgaccaaattttactaaggcgtaccactaccatc
accattgaatctgagggaaaagggtccacttttgctaaggcaagttttgttgcttctgaa
aataggacagatatttctctggatgatcctaatttctggcaaaaatgggctaaaaaagct
gacctagacatggatttgctcaacagcaagaacaacttagtgatcgatacaccacgagtg
cgtaagcaaacaaggcacttcagcactctgaaagatgatgacctagtagaattctcagat
ttggaaagtgaggatgatgagcgacctcgatcccgacgacatgacaggcatcatgcctat
ggacgcactgattgcttccgggtggaaaagcacctcttggtatatggttggggtcgttgg
cgtgatattctgtcccacgggcgattcaaacgacgaatgactgaacgggatgtggagaca
atctgccgtgccattcttgtatactgtcttttgcactaccgtggggatgaaaacatcaaa
ggcttcatttgggacttgatcagccctgcagagaatggcaaaacaaaagaactgcagaac
cactcaggtttgtctatcccagtgcccaggggacgcaaagggaagaaagtgaagtctcaa
agtacctttgatatccacaaagcagactggatccggaaatataaccccgataccctcttc
caggatgaaagttataagaaacatttgaaacaccaatgtaacaaggtattgttgagagta
cgtatgttgtattacctgcgacaagaggtgattggtgatcaggcagagaaggtgttagga
ggtgccattgctagtgagattgacatatggttcccagtggtggatcagttggaagtccca
acaaattggtgggatagtgaagctgacaagtccctgctcatcggagtttttaagcatggc
tatgagaaatataataccatgagagcagatccagctttatgttttctggaaaaagctggc
cggccagatgacaaggccattgcagcagaacatcgagtattggacaatttttctgatatt
gtagaaggggttgactttgataaggactgtgaagatcctgaatacaagccacttcaaggc
ccccccaaggaccaagaggatgagggtgatcctttgatgatgatggatgaggagatttct
gtgattgacagtgatgaagtccaggtgacccagcagccaggtcatctcttctggcctcca
ggctcagctctaacagccaggcttcgccgtctggttacagcctatcaacgtagctataag
cgagaacagatgaagatagaggcagcagagcgtggggaccggaggcgacgacgttgtgag
gcagccttcaaactgaaagaaattgcacgacgagagaaacagcagaggtggacaagacgt
gaggaatcagatttctaccgagtagtgtcaacctttggagtggagtttgatcctgacacc
ctccacttccactggggtcgattccgcacatttgcccgcttggacaaaaaaacagacgaa
agccttaccaagtatttccatggttttgtggccatgtgccgacaggtctgccgcttaccc
cctgctgctggagatgaatccccagaccctactctattcattgagcccatcacggaggag
agggcctcccgcactcttttcagaattgagttgcttcggcgattacgggaacaagtacta
tgccatccgttattagaagaccgattggcattgtgccagcccccaggccctgaacttccc
aagtggtgggaaccagttcgacatgatggggaacttctccgaggggcagcccgccatggg
gtgagccaaacagactgcaatattatgcaggacccagacttctctttcctggctgcccgt
atgaattacatgcagagccaacaggcaggggcaccagctccatccctgtcacgctgttct
accccactgctacaccaacagtatgcctcgagcactgcctcaccactgcccctgcgtcca
gatgttcctactgaaaagctaccagaggaggcagcaacccgtgtccccagcctggagagt
ctggccttaaaactagagcatgaggtggtggccaaaaacaggccaaccccacaagactat
gagttacggggagtcccctctgatcctacccccatggcttcccaaagtgttccaccagtc
aaactggaggaagaggatgattcggactctgagctggacttaagcaaactgtcagcatcc
tcctcctcttcttcctcttcatccagctccagctctagcactgaagacagtgaagatgaa
aaggaagaaaaactgagtgctgaccagtcctgctccaagctctatgatgaagaaagtctc
atgtccctcactatgtcccaggatggattccctaatgaagatggagagcaaatgactcct
gagctattgctgcttcaggagaggcagagagcttctgaatggcccaaggatcgtgtcctg
ataaaccgcattgacctcgtctgccaggctgtcctctcagggaaatggccctccagccgc
cggaatcaagaaatggtgactggagggtcactgggacaaggcaaccatctgctagatagt
cctctgctggctccaggcgaatatggggattcacctgtgcccacccctagaagcagtagt
gcagcttcaatggcagaagaggaggtggctgctgtcagtactgctgctgcccagttcaca
aaacttcgaaggggcatggatgaaaaggaatttacagtccagatcaaagatgaagaagga
ttgaagttgacatttcagaagcacaagttgatggccaacggagtgctaggagatggacat
ccactgttccataagaagaaggggagccgaaagaagttggtggagctggaggtggagtgt
atggaggagcctcatcaccttgacgtagacttggaggcccggattcctgtcatcaacaag
atcgatggcactttgctggtgggtgaagatgcccctcgtcgggctgagctggagatgtgg
ttacagggtcatccagaatttgctgttgatcctcggttcctagcttatatggaagatcac
cgaaaacagaaatggctcagatgtaaaaaacccaataaggcagagatgggttgtttggga
atggaacaagtgcaaacagtcaattctcggaatggaaagaagggtcatctccctgacact
atgttcaaccgggtcttaccaggccctgttgcaccagacaatagcaagaagcgagcccgc
agggtacggccagacctctccaagatggtggccctgatgcagggtgggggctctggaccc
ctgtctttgcatagtaccttccagcatggtagcagtggcttacaacctgtgtcagcacta
ggtcacagcagtgccacctctacatctttgccttttgtgccatttgtgatgggaggcaca
gtctcatcccctcacgtagactccagcacaatgcttcatcaccaacatcaccaccaccac
catcaccaccaccatcaccaccacccaggcctgagagcttctagctacccttccacgcca
gctactaccacctctgcaggcacagcccttaggttgccacctctgcaacctgaggaagaa
gaggaagaggaggaagaagatgaggaggaagaagatgaggaggaggaagatgatgactta
tctcagggctatgatagctcagaaagggacttctcactcattgatgaccctatgatgcca
gccaactcggactccagtgaagatgctgatgactga
DBGET
integrated database retrieval system