Monodelphis domestica (gray short-tailed opossum): 100027192
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Entry
100027192 CDS
T01031
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mdo
Monodelphis domestica (gray short-tailed opossum)
Brite
KEGG Orthology (KO) [BR:
mdo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdo03016
]
100027192 (TRUB1)
Enzymes [BR:
mdo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
100027192 (TRUB1)
Transfer RNA biogenesis [BR:
mdo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
100027192 (TRUB1)
Prokaryotic type
100027192 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
100027192
NCBI-ProteinID:
XP_007479012
Ensembl:
ENSMODG00000009676
UniProt:
F6SH34
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All DBs
Position
1:complement(95543673..95586868)
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AA seq
370 aa
AA seq
DB search
MMAACEAVAASATLATATERAEEGAKAATTGTAASAAASGKAAVPSAGGTTVKEAAAAVT
ETVAVTTTTAAMGGAGAARSAAAAKLLSLSGVFAVYKPKGPTSAELLNQLKEKLLAEAGM
PPQDGNKRKKQALKIGHGGTLDSAATGVLVVGIGKGTKMLTSMLSGSKKYIATGELGKAT
DTLDSTGKITEEKPYDQIKQEDIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKKGEV
VEAKPARPVTVYSLSLQKFQPPLFTLDVECGGGFYIRSLVSDIGKELSSCATVQELTRTK
QGPFTLEEHALREDKWTIDGIAQSLEHCMPLLSVEPSVKKLKTEDSKVQAVSSEDKTSQV
KEKDGVIGTS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgcctgcgaggcggtggcagcatcagcgactctggctacagcgacagaaagg
gccgaagagggggcgaaagcagccaccacggggacggccgcatcagcggcggcctcaggc
aaggccgcggtgccgtctgctggaggcacgacggtgaaggaagcggcagcagcggtgacc
gagacggtagctgtgaccaccacaacggccgcgatgggaggagcgggagccgcccgatcg
gcggcggccgccaaactgctgtccctgagcggtgtgttcgccgtgtacaagcccaagggc
cccacatcggccgagctactgaaccagctgaaggagaagctcctggcagaagctggtatg
cctcctcaagatgggaacaagaggaagaaacaggcattaaaaattggtcatggaggaact
ttggacagtgctgccacaggagttcttgtggttggaattggaaaaggaacaaaaatgttg
accagtatgttatcaggttccaagaagtatattgctactggagaattggggaaagccact
gatacactggattcaacagggaaaattacagaagaaaaaccttacgatcagataaagcaa
gaagatattgaaggcattctccagaaattcacaggaaatataatgcaagtgccccctctc
tattctgctttaaagaaagatggacagagactttcaactttgatgaagaaaggtgaagta
gtagaggcaaaacctgccagaccagtcacagtttatagcctctcccttcaaaaattccag
ccacctttatttacattagatgttgaatgtggaggaggtttttatatcagaagcttggtc
agtgacattggcaaagaactttcttcctgtgccactgtgcaagaactgacccgaactaaa
cagggaccatttacactagaggagcatgcccttcgagaagacaaatggacaattgatgga
atagcacaatccttagagcattgcatgcctcttctctcagtagaaccttctgttaaaaaa
ttaaaaactgaagattctaaagtacaagctgtgagctctgaagataaaacaagtcaggtt
aaggaaaaagatggagtgattggaacatcttaa
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