Methylorubrum extorquens AM1: Mex_1p3151
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Entry
Mex_1p3151 CDS
T00921
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mea
Methylorubrum extorquens AM1
Pathway
mea00470
D-Amino acid metabolism
mea00550
Peptidoglycan biosynthesis
mea01100
Metabolic pathways
mea01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mea00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Mex_1p3151 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Mex_1p3151 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Mex_1p3151 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Mex_1p3151 (ddlB)
Enzymes [BR:
mea01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Mex_1p3151 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
mea01011
]
Precursor biosynthesis
Amino acid ligase
Mex_1p3151 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ACS40899
UniProt:
C5AWP4
LinkDB
All DBs
Position
3290483..3291406
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AA seq
307 aa
AA seq
DB search
MSKHVAVLMGGWSSEREISLRSGNACAEALEGEGYRVTRVDVGPDIATVLTELRPDAALN
ALHGPAGEDGTIQGLLEILKIPYTHSGVLASALAMHKERAKTVMRAAGVSVPEGRVVNRH
DAAKSHPLTPPYVVKPIAEGSSMGVIIVRDERSHPPQILASDEWVYGEEVLAETYVAGRE
LTCAVLGDRALGVTEIKPVSGEWYDFDAKYAGGGSIHVLPADLKLNIYQRVQELALTAHQ
ALGCRGVSRADLRYDDTPGGTGALVVLEVNTQPGMTQTSLVPEIAAHAGQSFGELVRWMV
EDASLNR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacgtcgccgtcctcatgggcggctggtcttccgagcgggaaatctcgctc
cgctccggcaatgcctgcgccgaggcgctggaaggggaggggtatcgcgtcacccgcgtc
gatgtcgggcctgacatcgcgacggtgctgaccgagctgcggcccgacgcggcgctcaac
gcgctccacggcccagccggcgaggacggcacgatccagggcctcctggagatcctgaag
atcccctacacccattccggcgtgctggcctcggcgctcgccatgcacaaggaacgtgcc
aaaacggtcatgcgcgcggccggtgtgagcgttccggagggccgggtcgttaaccgtcat
gatgcggcgaagtcacacccgttaacccctccctatgtcgtgaagccgatcgccgagggc
tcctccatgggggtcatcatcgtgcgtgacgagcgctcgcacccgccccagattctcgcc
tccgacgagtgggtctacggcgaggaagtccttgcagagacttacgttgcgggccgcgag
ctgacctgcgcggtgctgggcgaccgggccctcggagtgaccgagatcaagcccgtctcg
ggggagtggtacgacttcgatgcgaagtacgccggaggggggtcgatccacgtcctcccc
gcggatcttaaactaaatatttaccagcgtgtccaagagttggcgttaacggcgcatcaa
gcactgggatgtcgtggcgtcagccgtgccgaccttcgttacgacgacacgccgggtgga
accggcgctctcgtcgtcctcgaggtcaacacgcagccagggatgacccagacgagcctt
gtgccggagatcgcggcccacgcaggccagagtttcggtgaactcgtccgatggatggtg
gaggacgcttctctcaaccgctga
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