Methylorubrum extorquens AM1: Mex_1p4240
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Entry
Mex_1p4240 CDS
T00921
Name
(GenBank) putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) with PAS/PAC sensor
Organism
mea
Methylorubrum extorquens AM1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_4
PAS
PAS_9
PAS_3
PAS_8
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ACS41877
UniProt:
C5B260
LinkDB
All DBs
Position
complement(4326877..4328979)
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AA seq
700 aa
AA seq
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MPLNDLEELARIAFDWLWATDAEDRFSYVSPGAERVLGRSPADLIGLTRSALVCEGEGDS
LAVYRETITARRPYRDLTYVYRHPDGTPRWFEISGRPHFSPEGDFLGYHGVGSDVTEQHR
TRCALVEAHAELSEQNRRFDAALENMTHGLCMFDAEQRLLVWNRRYLGIFGLPDDAVHVG
MGQRAIIEMLVARGCYKRGATVDAISEGTRTSLSGDGSKSVLRELADGRVIAVTHRPMAD
GGGWVATFEDITERRRNEARIIHMARHDGLTDLPNRTHLREVGAEWLAALRTAAEAPLAV
LCLDLDRFKPVNDSFGHAVGDALLRAVADRLRGHVRSHDVVARLGGDEFAVLSRVEDAAA
AAALAERLIETVAAPYTLDGITVEIGMSAGIALAEGDVPHDIERLLKEADLALYEAKTEG
RGTVRLFEPQMDETLRERLGLERELREALTLDRFELHYQPLVDLSDNRITGMEALIRWHH
PERGLVSPAVFIPLAEETGLIVPIGEWVLRQACRDAVDWPGEISVAVNVSPLQLRHRGFI
QSVLGALAASGLKASRLELEITENVLLDDTEANLETLHTLRKLGVRISMDDFGTGYSSIS
YLRRFPFDKIKIDRSFVRDCAAQSEAGAIIRAIVSLGASLGITTLVEGVETEPQLATIRA
EGAQEVQGYLFSPPRPVHEIAVLLEAGTTAEGRPGRTLAA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaacgacctcgaagaactcgcgcgaatcgccttcgactggctctgggccacc
gatgccgaggatcgattcagctacgtctccccaggcgccgagcgtgtgctgggccgctct
ccggcggacctgatcgggctcacgcggtcggccttggtctgcgagggggagggtgacagc
cttgccgtctaccgcgagacgatcaccgcccgccgcccgtaccgcgacctgacctacgtc
taccgccatcccgacggcacgccgcgctggttcgagatcagcggccgcccgcatttctcg
cccgagggcgatttcctgggctatcacggcgtcggcagcgacgtcaccgagcagcaccgg
acccggtgcgccctggtcgaggcgcacgccgaactcagcgagcagaaccggcgcttcgac
gcggccctggagaacatgacgcacggcctgtgcatgttcgatgcggagcagcggctcctg
gtgtggaaccggcgctacctggggatcttcggcctgcccgacgacgcagtccatgtcggc
atgggccagcgcgccatcatcgagatgctggtggcgcgcgggtgctacaagcgcggcgcc
acggtcgatgcgatcagcgagggcacccgcacctcgctcagcggagacgggtcgaaatcg
gttttgcgcgaactcgccgacgggcgggtcatcgccgtgacccaccggcccatggccgat
ggcggcggctgggtggcgaccttcgaggacatcaccgagcggcggcgcaacgaggcgcgc
atcatccacatggcccgccacgacgggctcaccgacctgccgaaccgcacccacctgcgc
gaggtcggcgccgaatggctcgcggcgttgcgcaccgccgcggaggcgccgctcgcggtg
ctctgcctcgacctcgaccgcttcaagccggtcaacgacagcttcggccacgcggtgggc
gatgccctgctgcgggcggtggccgatcggctgcgcgggcacgtgcgcagccacgacgtc
gtggcccggctcggcggcgacgaattcgcagtgctctcccgcgtcgaggatgcggccgcg
gccgcggccctggccgagcgcctgatcgagaccgtggccgcgccctacaccctcgacggg
atcaccgtcgagatcgggatgagcgccggcatcgccctggccgagggcgacgtcccgcac
gacatcgagcgcctcctcaaggaggccgacctcgccctctacgaggcgaagaccgaggga
cgcggcaccgtccgcctgttcgagcctcagatggacgagaccctgcgcgagcggctcggc
ctcgaacgcgagctgcgcgaggcgctcacgctggaccgcttcgaactgcattatcagccg
ctcgtggacctgtccgacaaccgcatcaccggcatggaggcgctgatccgctggcaccat
cccgagcgcgggctcgtgagcccggcggtgttcatcccgctcgccgaggagaccggtctg
atcgtgccgatcggcgaatgggtgctgcgccaggcctgccgggacgcggtggactggccg
ggcgagatcagcgtggccgtcaacgtctcgccgctgcagttgcgccaccgcggcttcatc
cagagcgtgctcggcgcgctcgcggccagcggcctcaaggcgagccggctcgaactggag
atcaccgagaacgtgctactcgacgacaccgaggcgaacctcgaaacgctccacaccctg
cgcaagctcggcgtgcgcatctccatggacgatttcggcaccggctattcctcaatcagc
tacctgcgccgcttccccttcgacaagatcaagatcgaccgttccttcgtgcgcgactgc
gccgcccagtcggaggccggcgcgatcatccgcgccatcgtgagcctgggggcgagcctc
ggcatcaccaccctggtcgaaggcgtcgagaccgagccgcagctcgccacgatccgggcc
gagggtgcgcaggaggtgcagggttacctgttcagcccgccccgcccggtccacgagatc
gccgtcctgctcgaagccgggaccacggccgagggccggcccgggcggacgctggcagcc
tga
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