Methylophaga nitratireducenticrescens: Q7A_2848
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Entry
Q7A_2848 CDS
T02055
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mej
Methylophaga nitratireducenticrescens
Pathway
mej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Q7A_2848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mej03400
]
Q7A_2848
Enzymes [BR:
mej01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Q7A_2848
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Q7A_2848
DNA repair and recombination proteins [BR:
mej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Q7A_2848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Zn-ribbon_8
A2L_zn_ribbon
DZR
HscB_4_cys
TF_Zn_Ribbon
Nudix_N_2
HypA
Motif
Other DBs
NCBI-ProteinID:
AFI85630
UniProt:
I1XML1
LinkDB
All DBs
Position
2655072..2655890
Genome browser
AA seq
272 aa
AA seq
DB search
MPELPEVETTRSGIAPYIENQQVKQVVIRDSRLRWPITENLDKKLCGKIIQSVSRRAKYL
LLHTAEGTLFIHLGMSGRLRILTTFQPAEKHDHVDIVFANNIILRFTDPRRFGAVLWTTE
PPLQHPLLHHLGPEPLEEDFDAEYLFKRSRKRQVSIKTFIMNAEIVVGVGNIYASESLFL
SGINPQLIAAKLTKKQAEKLVAAIKLTLEKAIAAGGTTLRDFRDSEGKPGYFAQELWVYA
RQNQDCKQCGHPIELIRQSQRATYFCPQCQKL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagtcgaaactacccgcagtggcattgcgccatatatagaaaat
caacaggttaaacaggttgtcattcgtgactctcgactgcgctggcccatcactgaaaat
ctggataaaaaactctgtgggaaaatcattcagtcggtcagccgccgcgccaaatattta
ctgctccatactgctgaagggaccctgtttatccatctgggtatgtcagggcggttacgc
attctgaccacttttcagccagctgaaaaacatgatcatgttgatattgtgtttgccaat
aatattattctgcgctttaccgatcctcgtcgttttggggctgtattgtggaccactgag
ccaccactgcaacatccgttattacaccatctggggcctgaaccactggaggaggatttt
gacgccgaatacctgttcaaacgtagccgtaagcgtcaggtcagcattaaaacgtttatt
atgaatgcggagatcgttgtgggtgtggggaatatctatgccagtgaatcactgtttctc
tccggcattaaccctcaactgatagcagcaaaactaacaaaaaaacaggcagaaaaactg
gtcgccgcgatcaaactgactttggaaaaagcgattgcagcgggcggaacaaccttgcgg
gattttcgggatagcgaaggcaaacccggatattttgctcaggaattatgggtttatgca
cggcagaatcaagactgtaaacaatgcggtcatccgatagagttgattcgccagtcacag
cgggcgacctatttctgcccgcaatgccagaaattgtaa
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