Methanosarcina sp. Kolksee: MSKOL_2253
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Entry
MSKOL_2253 CDS
T03821
Name
(GenBank) Glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00250
Alanine, aspartate and glutamate metabolism
mek00410
beta-Alanine metabolism
mek00430
Taurine and hypotaurine metabolism
mek00650
Butanoate metabolism
mek01100
Metabolic pathways
mek01110
Biosynthesis of secondary metabolites
mek01120
Microbial metabolism in diverse environments
mek02024
Quorum sensing
Module
mek_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MSKOL_2253
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
MSKOL_2253
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MSKOL_2253
00430 Taurine and hypotaurine metabolism
MSKOL_2253
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MSKOL_2253
Enzymes [BR:
mek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
MSKOL_2253
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AKB48030
UniProt:
A0A0E3QEX1
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Position
complement(2910911..2912317)
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AA seq
468 aa
AA seq
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MISKKVNLETLDESKKYRVGAYSARYIPKVKEKGIPKYEFPEKGMSPRAAYQLVHDEQSL
DGNPFLNLASFVNTWMEPEADQLVMENINKNIIDIFEYPQTDKVIHRNIVNMLGRFFNGH
HTEFMGTATAGSSEAIMLGLLAHKWSWKNSGRGTGKPNIIFGNDAHVCWDKFAKYFDVEA
RKIPIDKDVRTITADAVSEQIDENTICVGCVLGTTFTGEIDPVKDINDLLLGYKKEKDWD
IPIHIDAASGGFILPFTEPDFEWDFRLERVKSINVSGHKYGLTYPGLGWLIFRDESDLPE
DLIFHVNYLGEMEDSYTLNFSGGSAMVVAQYYNILRFGRAGYTGIMKNILEVSQDLAERV
DRLGRFEILNKGERLPIIAFRQKEETGYSLQQLSYKLREKGWIVPAYCLPENAADIEIMR
IVVRENFTSDMAAILVNDIENACQFFENGRKSETKKPCPSDDGMVHIC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaagaaagtaaatctggaaactttagacgagtctaaaaagtatcgtgttgga
gcatacagtgccagatatatcccaaaggtcaaagaaaaaggaattccaaagtatgaattc
cctgaaaagggaatgagtccaagagctgcttatcaactggtacatgatgaacagagcctc
gacggcaatcctttcctgaacctggcaagttttgtcaacacatggatggaaccggaagca
gaccagcttgtcatggaaaacataaataaaaacatcatagatattttcgaatatcctcaa
actgacaaagttattcacaggaatattgtgaatatgcttgggcgcttttttaatgggcat
cataccgaattcatgggtacggcaacagctggctcttcagaagctataatgctgggtctg
ctggctcacaaatggagctggaaaaactcagggcgaggcacaggcaagccaaacataatt
tttggaaatgacgctcacgtttgctgggataagtttgccaaatattttgacgttgaagct
agaaaaattcctatagacaaagatgtacgtacaattacggcagatgctgtctcagagcag
attgatgagaacacaatctgtgttggttgcgttctgggaacaacttttacaggagaaatc
gatcctgtaaaggatattaatgatttgcttttgggatacaagaaagaaaaagactgggac
atacccatccacatagatgctgcaagtggcggcttcatattgccatttaccgaacctgat
tttgagtgggacttcagactggaaagagtaaaatcgataaacgtttcaggacataaatac
ggattaacttatccgggtcttggctggctgattttccgtgacgaaagtgaccttcccgaa
gacctgattttccatgtgaactacctcggagaaatggaagattcgtacaccctgaacttt
tcaggaggcagtgcaatggtcgtggcccaatattacaatattttaagattcggaagagct
ggctatactgggataatgaaaaatatccttgaggtttcccaggatcttgccgagagggtt
gatagactgggccgtttcgaaattttgaacaaaggagaaaggcttcctataattgctttc
agacaaaaagaggaaactggttattccctgcagcagctttcgtataagctgagagagaag
ggctggatagttcccgcatactgtcttccggaaaatgcggctgatattgagataatgcgc
attgtcgtaagagaaaacttcacttcggacatggcagcaattcttgttaacgatattgaa
aatgcatgtcagttttttgaaaatggtagaaaatccgaaacaaaaaaaccttgcccatct
gatgacggtatggtccacatttgctga
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