Methanosarcina sp. Kolksee: MSKOL_3383
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Entry
MSKOL_3383 CDS
T03821
Name
(GenBank) Ribulose-1,5-bisphosphate carboxylase, Type III
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
mek
Methanosarcina sp. Kolksee
Pathway
mek00630
Glyoxylate and dicarboxylate metabolism
mek01100
Metabolic pathways
mek01110
Biosynthesis of secondary metabolites
mek01120
Microbial metabolism in diverse environments
mek01200
Carbon metabolism
Module
mek_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
mek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MSKOL_3383
Enzymes [BR:
mek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
MSKOL_3383
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
AKB49160
UniProt:
A0A0E3QIE2
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All DBs
Position
complement(4365080..4366366)
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AA seq
428 aa
AA seq
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MRRDYIDMDYSPKDTDLVCEFHIEPSAGVNFEEAATHMAGESSIDSWTEIATLSPELAAR
LKPHVFYVDEDAQTVRVAYSEELFELGSVPQVLSAVAGNIFSMKIVDNLRLQDIAFPKSM
LSEFKGPGFGLPGIKELTGVQDRPLIGTIVKPKVGLTSEKHAEVAYNSFAGGCDLVKDDE
NLTDQKFNRFEKRAELTLKLAEKAESETGERKMYLCNITAPTCKEMIRRMNILKDLGASY
AMIDIVPVGWTALQTLREEADDAGLALHAHRCMHSAYTRNPHHGISMLVVAKLCRLVGLD
QLHIGTVVGKMHGEKHEVLSLRDECVLDNVPADESQHVLAQDWGGLKPMFPVASGGLAPT
MIPDLYTIFGRDVIMQFGGGIHAHPMGTAAGATACRQALEAALEGVSLQEYAKNHRELEL
AIDKWLKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagattatatagacatggactatagcccgaaggatactgatctggtatgtgag
ttccatatcgaaccgtcagcaggagtgaattttgaggaagctgcaacccatatggcaggg
gaaagctctatagattcctggactgaaatcgccacactcagtcccgaacttgcagccagg
ctaaaaccccatgttttttacgtagatgaggatgcacagactgtaagggtagcttactcg
gaagaactctttgaacttggttctgtcccgcaggtactcagtgcggttgcaggaaatatc
tttagtatgaaaatcgttgacaatctcagactgcaggatatagctttcccgaagtcaatg
ctctccgaattcaaaggtcctggattcgggttgccaggaatcaaggaacttacaggtgtg
caggacaggcctctcataggaactattgtcaagccgaaagttggattaacctctgaaaaa
catgctgaggtcgcttacaattcatttgcaggaggctgcgaccttgttaaagatgacgag
aaccttacggatcagaaatttaacagatttgaaaaaagagctgaacttactctgaagctt
gcagaaaaagcagaatctgagaccggagagcgtaaaatgtatctctgcaacattactgct
cctacctgtaaggaaatgatccgtcgcatgaacattcttaaagacctgggtgccagctat
gcgatgatcgacatcgtacctgtgggctggactgcacttcagaccttaagggaagaagca
gacgatgcagggcttgctctccatgcccaccgatgcatgcattcagcctataccaggaac
ccacaccatgggataagcatgcttgtcgttgccaagctctgcagactggtcgggcttgat
cagcttcacatcggtactgtagtagggaaaatgcacggagaaaaacacgaggttctatct
ctccgtgatgagtgtgtgttagacaatgtgcctgcggatgaaagccagcatgtacttgcc
caggactggggagggttgaagcctatgttcccggttgcttccggagggcttgcccctact
atgattcctgacctgtacactatcttcggaagggatgttattatgcaattcggtggcgga
attcacgcccatccaatgggtacggcagccggagccactgcttgcaggcaggcactcgaa
gcagcccttgagggagttagcctgcaggaatatgcgaaaaaccacagagaacttgaactt
gccatcgataagtggctgaagaaataa
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